BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0530.0007.p
         (123 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9J245.1 B9J245_BACCQ Putative uncharacterized protein                 62   2e-08
C2XCB8.1 C2XCB8_BACCE Putative uncharacterized protein                 62   2e-08
C2WN80.1 C2WN80_BACCE Putative uncharacterized protein                 62   2e-08
C2XUV4.1 C2XUV4_BACCE Putative uncharacterized protein                 60   5e-08
C2VCN4.1 C2VCN4_BACCE Putative uncharacterized protein                 60   6e-08

>B9J245.1 B9J245_BACCQ Putative uncharacterized protein
          Length = 121

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 61/116 (52%)

Query: 1   MENLTAEEKQQSVEAFKSIIRKSEKALSHMKTDAPQTRLLEKRMKAARIGAETLLARWEG 60
           MEN++  +K +S+++ +S IRK E ALS M      T L++KR+KAA IG   L + W+ 
Sbjct: 1   MENISNVDKVESIKSLQSTIRKLENALSQMTQKGSNTTLVKKRLKAASIGLAMLESIWDQ 60

Query: 61  RELDVCKTDXXXXXXXXXXXXXXXXXXXKRSKEGSGQRTYIMRRIEAIKVAVFYLD 116
                 K D                    +SK GS QRT + RRI+++++++  +D
Sbjct: 61  ETHHYTKEDLADARNVLIGLLPSIEKIYVKSKLGSPQRTLLERRIKSLELSIQAID 116


>C2XCB8.1 C2XCB8_BACCE Putative uncharacterized protein
          Length = 121

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 61/118 (51%)

Query: 1   MENLTAEEKQQSVEAFKSIIRKSEKALSHMKTDAPQTRLLEKRMKAARIGAETLLARWEG 60
           MEN++  +K +S+++ +S IRK E ALS M      T L++KR+KAA IG   L + W  
Sbjct: 1   MENVSNVDKVESIQSLQSTIRKLENALSQMTQKGANTTLVKKRLKAASIGLAMLESIWNQ 60

Query: 61  RELDVCKTDXXXXXXXXXXXXXXXXXXXKRSKEGSGQRTYIMRRIEAIKVAVFYLDDL 118
                 + D                    +SK GS QRT + RRI+++++++  +D L
Sbjct: 61  ETHHYTQEDLADARNVLIGLLPSIEKIYVKSKLGSPQRTLLERRIKSLELSIQAIDHL 118


>C2WN80.1 C2WN80_BACCE Putative uncharacterized protein
          Length = 121

 Score = 62.0 bits (149), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 61/118 (51%)

Query: 1   MENLTAEEKQQSVEAFKSIIRKSEKALSHMKTDAPQTRLLEKRMKAARIGAETLLARWEG 60
           MEN++  +K +S+++ +S IRK E ALS M      T L++KR+KAA IG   L + W  
Sbjct: 1   MENVSNVDKVESIQSLQSTIRKLENALSQMTQKGANTTLVKKRLKAASIGLAMLESIWNQ 60

Query: 61  RELDVCKTDXXXXXXXXXXXXXXXXXXXKRSKEGSGQRTYIMRRIEAIKVAVFYLDDL 118
                 + D                    +SK GS QRT + RRI+++++++  +D L
Sbjct: 61  ETHHYTQEDLADARNVLIGLLPSIEKIYVKSKLGSPQRTLLERRIKSLELSIQAIDHL 118


>C2XUV4.1 C2XUV4_BACCE Putative uncharacterized protein
          Length = 120

 Score = 60.5 bits (145), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 61/118 (51%)

Query: 1   MENLTAEEKQQSVEAFKSIIRKSEKALSHMKTDAPQTRLLEKRMKAARIGAETLLARWEG 60
           MEN++ ++K +S+++ +S IRK E A S M      T L++KR+KA  IG   L   W  
Sbjct: 1   MENVSNKDKLESIKSLQSTIRKLENAFSQMTQKGANTTLVKKRLKAVCIGLVVLENVWNQ 60

Query: 61  RELDVCKTDXXXXXXXXXXXXXXXXXXXKRSKEGSGQRTYIMRRIEAIKVAVFYLDDL 118
                 + +                    +SK+GS QRT + RRI+A+++++  +D+L
Sbjct: 61  ESHRYSQEELAEARNVLAGLLPSIERAYDKSKDGSPQRTLLTRRIKALELSIQAIDNL 118


>C2VCN4.1 C2VCN4_BACCE Putative uncharacterized protein
          Length = 119

 Score = 60.1 bits (144), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 59/118 (50%)

Query: 1   MENLTAEEKQQSVEAFKSIIRKSEKALSHMKTDAPQTRLLEKRMKAARIGAETLLARWEG 60
           MEN++  +K +S+++ +S IRK E ALS M      T L++KR KA  IG   L   W  
Sbjct: 1   MENVSNLDKSESIKSLQSTIRKLENALSQMTQKGANTTLVKKRFKAVCIGLAALENAWNQ 60

Query: 61  RELDVCKTDXXXXXXXXXXXXXXXXXXXKRSKEGSGQRTYIMRRIEAIKVAVFYLDDL 118
           +     + +                    +SK GS QRT + RRI+A++++V  +D L
Sbjct: 61  QSHQYSQEELIEARNVLVGLLPSMERAYDKSKVGSPQRTLLTRRIKALELSVQAIDKL 118


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.315    0.129    0.343 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 490,240,772
Number of extensions: 12352593
Number of successful extensions: 43232
Number of sequences better than 1.0e-05: 69
Number of HSP's gapped: 43100
Number of HSP's successfully gapped: 69
Length of query: 123
Length of database: 3,060,696,203
Length adjustment: 89
Effective length of query: 34
Effective length of database: 2,222,225,868
Effective search space: 75555679512
Effective search space used: 75555679512
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 125 (52.8 bits)