BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0530.0006.p (207 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KEN7.1 B3KEN7_9BACI Beta-lactamase inhibitory protein II 236 8e-61 C2WA56.1 C2WA56_BACCE Beta-lactamase inhibitory protein II 234 2e-60 B7HIN2.1 B7HIN2_BACC4 Beta-lactamase inhibitory protein II 230 6e-59 C3FIN0.1 C3FIN0_BACTB Beta-lactamase inhibitory protein II 230 6e-59 C3D052.1 C3D052_BACTU Beta-lactamase inhibitory protein II 230 6e-59 >B3KEN7.1 B3KEN7_9BACI Beta-lactamase inhibitory protein II Length = 298 Score = 236 bits (602), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 134/221 (60%), Positives = 151/221 (68%), Gaps = 47/221 (21%) Query: 2 GDNKYGQCDVSGWRNIVAVAAGNVHMAKNTGNAHTIGLKSDGTVTAVGWNKHNQCDVNDW 61 GDN GQCDVSGWR+IVAVAAGNVHMA NTGNAHTIGL+SDGTV AVGWNKHNQCDV+ W Sbjct: 41 GDNHNGQCDVSGWRDIVAVAAGNVHMATNTGNAHTIGLRSDGTVAAVGWNKHNQCDVSGW 100 Query: 62 RDIVAVAAGWCRTIGLKSDGTVVAAGRNNEGECNVSGXXXXTAL---------------- 105 RD+VAVAAGW RT+GL+SDG VVAAGRNNEG+C++ G A+ Sbjct: 101 RDMVAVAAGWRRTVGLQSDGAVVAAGRNNEGQCSIGGWLDIVAVAAGDWHTVGLKADGTV 160 Query: 106 -------------------------------LQSDGSVAAAGWNKHNQCDLSGWRGIVAI 134 LQSDG+VAA G NKH QCD+ GW GIVA+ Sbjct: 161 TIVGNNRYGQCNVSSWRNIVEASAGYLHTVGLQSDGTVAAVGLNKHGQCDVIGWSGIVAV 220 Query: 135 AAGSSHTIGLKSDGTVTAAGNNRYRQCDVNGWGDIVAVAAG 175 AAGS HTIGLKSDGTV AAG N++ QC+V+GW DIVAVAAG Sbjct: 221 AAGSYHTIGLKSDGTVIAAGWNQHGQCNVSGWRDIVAVAAG 261 Score = 172 bits (436), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 93/174 (53%), Positives = 121/174 (69%), Gaps = 18/174 (10%) Query: 2 GDNKYGQCDVSGWRNIVAVAAGNVHMAKNTGNAHTIGLKSDGTVTAVGWNKHNQCDVNDW 61 G N GQC + GW +IVAVAAG+ HT+GLK+DGTVT VG N++ QC+V+ W Sbjct: 126 GRNNEGQCSIGGWLDIVAVAAGD---------WHTVGLKADGTVTIVGNNRYGQCNVSSW 176 Query: 62 RDIVAVAAGWCRTIGLKSDGTVVAAGRNNEGECNVSGXXXXTAL---------LQSDGSV 112 R+IV +AG+ T+GL+SDGTV A G N G+C+V G A+ L+SDG+V Sbjct: 177 RNIVEASAGYLHTVGLQSDGTVAAVGLNKHGQCDVIGWSGIVAVAAGSYHTIGLKSDGTV 236 Query: 113 AAAGWNKHNQCDLSGWRGIVAIAAGSSHTIGLKSDGTVTAAGNNRYRQCDVNGW 166 AAGWN+H QC++SGWR IVA+AAG +HT+GL+SDGTV A G+N Y QCDV+ W Sbjct: 237 IAAGWNQHGQCNVSGWRDIVAVAAGCAHTLGLQSDGTVVAVGDNEYGQCDVSEW 290 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 87/164 (53%), Positives = 104/164 (63%), Gaps = 18/164 (10%) Query: 32 GNAHTIGLKSDGTVTAVGWNKHNQCDVNDWRDIVAVAAGW---------CRTIGLKSDGT 82 G H++ L SDGTVT G N + QCDV+ WRDIVAVAAG TIGL+SDGT Sbjct: 24 GRRHSVALTSDGTVTVAGDNHNGQCDVSGWRDIVAVAAGNVHMATNTGNAHTIGLRSDGT 83 Query: 83 VVAAGRNNEGECNVSGXXXXTAL---------LQSDGSVAAAGWNKHNQCDLSGWRGIVA 133 V A G N +C+VSG A+ LQSDG+V AAG N QC + GW IVA Sbjct: 84 VAAVGWNKHNQCDVSGWRDMVAVAAGWRRTVGLQSDGAVVAAGRNNEGQCSIGGWLDIVA 143 Query: 134 IAAGSSHTIGLKSDGTVTAAGNNRYRQCDVNGWGDIVAVAAGYL 177 +AAG HT+GLK+DGTVT GNNRY QC+V+ W +IV +AGYL Sbjct: 144 VAAGDWHTVGLKADGTVTIVGNNRYGQCNVSSWRNIVEASAGYL 187 Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 63/97 (64%), Positives = 72/97 (74%), Gaps = 9/97 (9%) Query: 1 VGDNKYGQCDVSGWRNIVAVAAGNVHMAKNTGNAHTIGLKSDGTVTAVGWNKHNQCDVND 60 VG NK+GQCDV GW IVAVAAG+ H TIGLKSDGTV A GWN+H QC+V+ Sbjct: 201 VGLNKHGQCDVIGWSGIVAVAAGSYH---------TIGLKSDGTVIAAGWNQHGQCNVSG 251 Query: 61 WRDIVAVAAGWCRTIGLKSDGTVVAAGRNNEGECNVS 97 WRDIVAVAAG T+GL+SDGTVVA G N G+C+VS Sbjct: 252 WRDIVAVAAGCAHTLGLQSDGTVVAVGDNEYGQCDVS 288 Score = 113 bits (283), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 66/127 (51%), Positives = 81/127 (63%), Gaps = 18/127 (14%) Query: 67 VAAGWCRTIGLKSDGTVVAAGRNNEGECNVSGXXXXTAL------------------LQS 108 +AAG ++ L SDGTV AG N+ G+C+VSG A+ L+S Sbjct: 21 IAAGRRHSVALTSDGTVTVAGDNHNGQCDVSGWRDIVAVAAGNVHMATNTGNAHTIGLRS 80 Query: 109 DGSVAAAGWNKHNQCDLSGWRGIVAIAAGSSHTIGLKSDGTVTAAGNNRYRQCDVNGWGD 168 DG+VAA GWNKHNQCD+SGWR +VA+AAG T+GL+SDG V AAG N QC + GW D Sbjct: 81 DGTVAAVGWNKHNQCDVSGWRDMVAVAAGWRRTVGLQSDGAVVAAGRNNEGQCSIGGWLD 140 Query: 169 IVAVAAG 175 IVAVAAG Sbjct: 141 IVAVAAG 147 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 33/69 (47%), Positives = 39/69 (56%), Gaps = 12/69 (17%) Query: 107 QSDGSVAAAGWNKHNQCDLSGWRGIVAIAAGSSHTIGLKSDGTVTAAGNNRYRQCDVNGW 166 Q + + W KH IAAG H++ L SDGTVT AG+N QCDV+GW Sbjct: 6 QPEAAFKVKRWPKHT------------IAAGRRHSVALTSDGTVTVAGDNHNGQCDVSGW 53 Query: 167 GDIVAVAAG 175 DIVAVAAG Sbjct: 54 RDIVAVAAG 62 >C2WA56.1 C2WA56_BACCE Beta-lactamase inhibitory protein II Length = 300 Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 125/184 (67%), Positives = 140/184 (76%), Gaps = 9/184 (4%) Query: 1 VGDNKYGQCDVSGWRNIVAVAAGNVHMAKNTGNAHTIGLKSDGTVTAVGWNKHNQCDVND 60 VGDNKYGQCDVSGW +IVAVAA NVHMA NTGNAHTIGLKSDG V AVGWN+H QCDVND Sbjct: 40 VGDNKYGQCDVSGWYDIVAVAAANVHMATNTGNAHTIGLKSDGIVAAVGWNQHEQCDVND 99 Query: 61 WRDIVAVAAGWCRTIGLKSDGTVVAAGRNNEGECNVSGXXXXTAL---------LQSDGS 111 W DIVA++AGW RTIGLK DGTVVA GR NEG CNVS A+ L+ D + Sbjct: 100 WHDIVAISAGWRRTIGLKCDGTVVAVGRKNEGACNVSSWRDIVAVAAGDWHTIGLKLDST 159 Query: 112 VAAAGWNKHNQCDLSGWRGIVAIAAGSSHTIGLKSDGTVTAAGNNRYRQCDVNGWGDIVA 171 V A G N+++QC +SGW IVAIAAG HT+GLKSDG VTAAGNN+ QCDV+ W IVA Sbjct: 160 VTAVGNNRYDQCSVSGWYDIVAIAAGYLHTVGLKSDGMVTAAGNNKNEQCDVSDWRGIVA 219 Query: 172 VAAG 175 +A G Sbjct: 220 IAVG 223 Score = 171 bits (432), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 96/175 (54%), Positives = 119/175 (68%), Gaps = 18/175 (10%) Query: 1 VGDNKYGQCDVSGWRNIVAVAAGNVHMAKNTGNAHTIGLKSDGTVTAVGWNKHNQCDVND 60 VG G C+VS WR+IVAVAAG+ HTIGLK D TVTAVG N+++QC V+ Sbjct: 125 VGRKNEGACNVSSWRDIVAVAAGD---------WHTIGLKLDSTVTAVGNNRYDQCSVSG 175 Query: 61 WRDIVAVAAGWCRTIGLKSDGTVVAAGRNNEGECNVSGXXXXTAL---------LQSDGS 111 W DIVA+AAG+ T+GLKSDG V AAG N +C+VS A+ L+SDG+ Sbjct: 176 WYDIVAIAAGYLHTVGLKSDGMVTAAGNNKNEQCDVSDWRGIVAIAVGSNHTVGLKSDGT 235 Query: 112 VAAAGWNKHNQCDLSGWRGIVAIAAGSSHTIGLKSDGTVTAAGNNRYRQCDVNGW 166 V A GWN++ QC++S WR IVAIAAG +HT+GLKSDGTV A G+N Y QCDV+ W Sbjct: 236 VVAVGWNQYGQCNVSDWRDIVAIAAGCAHTVGLKSDGTVVAVGDNEYGQCDVSDW 290 Score = 112 bits (280), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 73/167 (43%), Positives = 85/167 (50%), Gaps = 56/167 (33%) Query: 67 VAAGWCRTIGLKSDGTVVAAGRNNEGECNVSGXXXXTAL------------------LQS 108 ++AG T+GLKSDGTV A G N G+C+VSG A+ L+S Sbjct: 21 ISAGRRHTVGLKSDGTVTAVGDNKYGQCDVSGWYDIVAVAAANVHMATNTGNAHTIGLKS 80 Query: 109 DGSVAAAGWNKHNQCD--------------------------------------LSGWRG 130 DG VAA GWN+H QCD +S WR Sbjct: 81 DGIVAAVGWNQHEQCDVNDWHDIVAISAGWRRTIGLKCDGTVVAVGRKNEGACNVSSWRD 140 Query: 131 IVAIAAGSSHTIGLKSDGTVTAAGNNRYRQCDVNGWGDIVAVAAGYL 177 IVA+AAG HTIGLK D TVTA GNNRY QC V+GW DIVA+AAGYL Sbjct: 141 IVAVAAGDWHTIGLKLDSTVTAVGNNRYDQCSVSGWYDIVAIAAGYL 187 >B7HIN2.1 B7HIN2_BACC4 Beta-lactamase inhibitory protein II Length = 295 Score = 230 bits (587), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 121/184 (65%), Positives = 140/184 (76%), Gaps = 9/184 (4%) Query: 1 VGDNKYGQCDVSGWRNIVAVAAGNVHMAKNTGNAHTIGLKSDGTVTAVGWNKHNQCDVND 60 VG NK G+C+VSGWR+I AVA GNVHMA NTGNAHTIGL D T AVGWNKH QCDVND Sbjct: 37 VGRNKEGECNVSGWRDIEAVAVGNVHMATNTGNAHTIGLTCDSTAVAVGWNKHEQCDVND 96 Query: 61 WRDIVAVAAGWCRTIGLKSDGTVVAAGRNNEGECNVSGXXXXTAL---------LQSDGS 111 W +IVAVAAGW RTIGLKSDGTVVA GRN EGECNVS A+ L+ DG+ Sbjct: 97 WHNIVAVAAGWRRTIGLKSDGTVVAVGRNKEGECNVSSWQGIVAVTAGDWHTVGLKLDGT 156 Query: 112 VAAAGWNKHNQCDLSGWRGIVAIAAGSSHTIGLKSDGTVTAAGNNRYRQCDVNGWGDIVA 171 + G N++ QC++S WRGIVA+ AG HT+GLK DGTVTA GN+++ QCDV+GW DIVA Sbjct: 157 LTTVGNNRYGQCNVSSWRGIVAVKAGYLHTVGLKRDGTVTAVGNDKHNQCDVSGWRDIVA 216 Query: 172 VAAG 175 +AAG Sbjct: 217 IAAG 220 Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 94/178 (52%), Positives = 120/178 (67%), Gaps = 18/178 (10%) Query: 1 VGDNKYGQCDVSGWRNIVAVAAGNVHMAKNTGNAHTIGLKSDGTVTAVGWNKHNQCDVND 60 VG NK G+C+VS W+ IVAV AG+ HT+GLK DGT+T VG N++ QC+V+ Sbjct: 122 VGRNKEGECNVSSWQGIVAVTAGD---------WHTVGLKLDGTLTTVGNNRYGQCNVSS 172 Query: 61 WRDIVAVAAGWCRTIGLKSDGTVVAAGRNNEGECNVSGXXXXTAL---------LQSDGS 111 WR IVAV AG+ T+GLK DGTV A G + +C+VSG A+ L+S+G+ Sbjct: 173 WRGIVAVKAGYLHTVGLKRDGTVTAVGNDKHNQCDVSGWRDIVAIAAGTNHTIGLKSNGT 232 Query: 112 VAAAGWNKHNQCDLSGWRGIVAIAAGSSHTIGLKSDGTVTAAGNNRYRQCDVNGWGDI 169 V A GWN++ QC++S WR IVAIAAG +HT+GLKSDGTV A GNN + QCDV W DI Sbjct: 233 VVAVGWNEYGQCNVSDWRDIVAIAAGCAHTVGLKSDGTVIAVGNNEFGQCDVVSWRDI 290 Score = 117 bits (292), Expect = 9e-25, Method: Compositional matrix adjust. Identities = 67/127 (52%), Positives = 78/127 (61%), Gaps = 18/127 (14%) Query: 67 VAAGWCRTIGLKSDGTVVAAGRNNEGECNVSGXXXXTAL------------------LQS 108 +AAG C T+GLKSDGTVVA GRN EGECNVSG A+ L Sbjct: 18 IAAGRCHTVGLKSDGTVVAVGRNKEGECNVSGWRDIEAVAVGNVHMATNTGNAHTIGLTC 77 Query: 109 DGSVAAAGWNKHNQCDLSGWRGIVAIAAGSSHTIGLKSDGTVTAAGNNRYRQCDVNGWGD 168 D + A GWNKH QCD++ W IVA+AAG TIGLKSDGTV A G N+ +C+V+ W Sbjct: 78 DSTAVAVGWNKHEQCDVNDWHNIVAVAAGWRRTIGLKSDGTVVAVGRNKEGECNVSSWQG 137 Query: 169 IVAVAAG 175 IVAV AG Sbjct: 138 IVAVTAG 144 >C3FIN0.1 C3FIN0_BACTB Beta-lactamase inhibitory protein II Length = 295 Score = 230 bits (586), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 121/184 (65%), Positives = 140/184 (76%), Gaps = 9/184 (4%) Query: 1 VGDNKYGQCDVSGWRNIVAVAAGNVHMAKNTGNAHTIGLKSDGTVTAVGWNKHNQCDVND 60 VG NK G+C+VSGWR+I AVA GNVHMA NTGNAHTIGL D T AVGWNKH QCDVND Sbjct: 37 VGRNKEGECNVSGWRDIEAVAVGNVHMATNTGNAHTIGLTCDSTAVAVGWNKHEQCDVND 96 Query: 61 WRDIVAVAAGWCRTIGLKSDGTVVAAGRNNEGECNVSGXXXXTAL---------LQSDGS 111 W +IVAVAAGW RTIGLKSDGTVVA GRN EGECNVS A+ L+ DG+ Sbjct: 97 WHNIVAVAAGWRRTIGLKSDGTVVAVGRNKEGECNVSSWQGIVAVTAGDWHTVGLKLDGT 156 Query: 112 VAAAGWNKHNQCDLSGWRGIVAIAAGSSHTIGLKSDGTVTAAGNNRYRQCDVNGWGDIVA 171 + G N++ QC++S WRGIVA+ AG HT+GLK DGTVTA GN+++ QCDV+GW DIVA Sbjct: 157 LTTVGNNRYGQCNVSSWRGIVAVKAGYLHTVGLKRDGTVTAVGNDKHNQCDVSGWRDIVA 216 Query: 172 VAAG 175 +AAG Sbjct: 217 IAAG 220 Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 93/178 (52%), Positives = 120/178 (67%), Gaps = 18/178 (10%) Query: 1 VGDNKYGQCDVSGWRNIVAVAAGNVHMAKNTGNAHTIGLKSDGTVTAVGWNKHNQCDVND 60 VG NK G+C+VS W+ IVAV AG+ HT+GLK DGT+T VG N++ QC+V+ Sbjct: 122 VGRNKEGECNVSSWQGIVAVTAGD---------WHTVGLKLDGTLTTVGNNRYGQCNVSS 172 Query: 61 WRDIVAVAAGWCRTIGLKSDGTVVAAGRNNEGECNVSGXXXXTAL---------LQSDGS 111 WR IVAV AG+ T+GLK DGTV A G + +C+VSG A+ L+S+G+ Sbjct: 173 WRGIVAVKAGYLHTVGLKRDGTVTAVGNDKHNQCDVSGWRDIVAIAAGTNHTIGLKSNGT 232 Query: 112 VAAAGWNKHNQCDLSGWRGIVAIAAGSSHTIGLKSDGTVTAAGNNRYRQCDVNGWGDI 169 V A GWN++ QC++S WR IVAIAAG +HT+GLKSDGTV A GNN + QC+V W DI Sbjct: 233 VVAVGWNEYGQCNVSDWRDIVAIAAGCAHTVGLKSDGTVIAVGNNEFGQCNVGSWRDI 290 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/127 (52%), Positives = 78/127 (61%), Gaps = 18/127 (14%) Query: 67 VAAGWCRTIGLKSDGTVVAAGRNNEGECNVSGXXXXTAL------------------LQS 108 +AAG C T+GLKSDGTVVA GRN EGECNVSG A+ L Sbjct: 18 IAAGRCHTVGLKSDGTVVAVGRNKEGECNVSGWRDIEAVAVGNVHMATNTGNAHTIGLTC 77 Query: 109 DGSVAAAGWNKHNQCDLSGWRGIVAIAAGSSHTIGLKSDGTVTAAGNNRYRQCDVNGWGD 168 D + A GWNKH QCD++ W IVA+AAG TIGLKSDGTV A G N+ +C+V+ W Sbjct: 78 DSTAVAVGWNKHEQCDVNDWHNIVAVAAGWRRTIGLKSDGTVVAVGRNKEGECNVSSWQG 137 Query: 169 IVAVAAG 175 IVAV AG Sbjct: 138 IVAVTAG 144 >C3D052.1 C3D052_BACTU Beta-lactamase inhibitory protein II Length = 295 Score = 230 bits (586), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 121/184 (65%), Positives = 140/184 (76%), Gaps = 9/184 (4%) Query: 1 VGDNKYGQCDVSGWRNIVAVAAGNVHMAKNTGNAHTIGLKSDGTVTAVGWNKHNQCDVND 60 VG NK G+C+VSGWR+I AVA GNVHMA NTGNAHTIGL D T AVGWNKH QCDVND Sbjct: 37 VGRNKEGECNVSGWRDIEAVAVGNVHMATNTGNAHTIGLTCDSTAVAVGWNKHEQCDVND 96 Query: 61 WRDIVAVAAGWCRTIGLKSDGTVVAAGRNNEGECNVSGXXXXTAL---------LQSDGS 111 W +IVAVAAGW RTIGLKSDGTVVA GRN EGECNVS A+ L+ DG+ Sbjct: 97 WHNIVAVAAGWRRTIGLKSDGTVVAVGRNKEGECNVSSWQGIVAVTAGDWHTVGLKLDGT 156 Query: 112 VAAAGWNKHNQCDLSGWRGIVAIAAGSSHTIGLKSDGTVTAAGNNRYRQCDVNGWGDIVA 171 + G N++ QC++S WRGIVA+ AG HT+GLK DGTVTA GN+++ QCDV+GW DIVA Sbjct: 157 LTTVGNNRYGQCNVSSWRGIVAVKAGYLHTVGLKRDGTVTAVGNDKHNQCDVSGWRDIVA 216 Query: 172 VAAG 175 +AAG Sbjct: 217 IAAG 220 Score = 168 bits (425), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 93/178 (52%), Positives = 120/178 (67%), Gaps = 18/178 (10%) Query: 1 VGDNKYGQCDVSGWRNIVAVAAGNVHMAKNTGNAHTIGLKSDGTVTAVGWNKHNQCDVND 60 VG NK G+C+VS W+ IVAV AG+ HT+GLK DGT+T VG N++ QC+V+ Sbjct: 122 VGRNKEGECNVSSWQGIVAVTAGD---------WHTVGLKLDGTLTTVGNNRYGQCNVSS 172 Query: 61 WRDIVAVAAGWCRTIGLKSDGTVVAAGRNNEGECNVSGXXXXTAL---------LQSDGS 111 WR IVAV AG+ T+GLK DGTV A G + +C+VSG A+ L+S+G+ Sbjct: 173 WRGIVAVKAGYLHTVGLKRDGTVTAVGNDKHNQCDVSGWRDIVAIAAGTNHTIGLKSNGT 232 Query: 112 VAAAGWNKHNQCDLSGWRGIVAIAAGSSHTIGLKSDGTVTAAGNNRYRQCDVNGWGDI 169 V A GWN++ QC++S WR IVAIAAG +HT+GLKSDGTV A GNN + QC+V W DI Sbjct: 233 VVAVGWNEYGQCNVSDWRDIVAIAAGCAHTVGLKSDGTVIAVGNNEFGQCNVGSWRDI 290 Score = 116 bits (291), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/127 (52%), Positives = 78/127 (61%), Gaps = 18/127 (14%) Query: 67 VAAGWCRTIGLKSDGTVVAAGRNNEGECNVSGXXXXTAL------------------LQS 108 +AAG C T+GLKSDGTVVA GRN EGECNVSG A+ L Sbjct: 18 IAAGRCHTVGLKSDGTVVAVGRNKEGECNVSGWRDIEAVAVGNVHMATNTGNAHTIGLTC 77 Query: 109 DGSVAAAGWNKHNQCDLSGWRGIVAIAAGSSHTIGLKSDGTVTAAGNNRYRQCDVNGWGD 168 D + A GWNKH QCD++ W IVA+AAG TIGLKSDGTV A G N+ +C+V+ W Sbjct: 78 DSTAVAVGWNKHEQCDVNDWHNIVAVAAGWRRTIGLKSDGTVVAVGRNKEGECNVSSWQG 137 Query: 169 IVAVAAG 175 IVAV AG Sbjct: 138 IVAVTAG 144 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.131 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,191,805,190 Number of extensions: 46112542 Number of successful extensions: 101829 Number of sequences better than 1.0e-05: 133 Number of HSP's gapped: 100307 Number of HSP's successfully gapped: 570 Length of query: 207 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 78 Effective length of database: 1,845,385,268 Effective search space: 143940050904 Effective search space used: 143940050904 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 128 (53.9 bits)