BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0529.0025.p
         (315 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KJT8.1 B3KJT8_9BACI Putative uncharacterized protein                147   2e-33
B8I1F2.1 B8I1F2_CLOCE Putative uncharacterized protein                 77   3e-12

>B3KJT8.1 B3KJT8_9BACI Putative uncharacterized protein
          Length = 301

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 140/246 (56%), Gaps = 2/246 (0%)

Query: 71  TAAKVADEINSVSMSKELFTSRKADSSSAIILENSVGEVKVTSGSSDSITVKATVVTHLG 130
           +A  ++D++       E  T+++A ++  ++++++VG +++ + S + I VK TV  +  
Sbjct: 54  SAIAISDQVKREGKEFEWTTAQEAGAAEGLVIDHAVGNIELIAASGNEINVKTTVWFNES 113

Query: 131 L--NKETERKILDNAEVTVQADGDELKVSTHAKNEPQKNLWAWAQKKYGASNFTIDYEIE 188
              N     ++ + A  ++      L++ TH +++   +LW W+QK++G S F IDY IE
Sbjct: 114 FFKNDNIRTQVTEQAATSLTLQDGMLELRTHPRDDSGISLWDWSQKQFGDSGFMIDYVIE 173

Query: 189 VPATIDEYDISNNVGAIQLKGLQGTFHIASDVGAIVMDNARFSGNSTVESNTGSIELDIR 248
           VP  +    I N+VG +++  L+G F +    G + ++    +G+S + S  GSI+LDI 
Sbjct: 174 VPEALQNIRIKNDVGKVRVNELKGAFELQLGAGEVQLNQTEITGSSRIVSEAGSIKLDIG 233

Query: 249 GMKTGSSLKASSDIGKVKAGLEDSLKCTVSAKTELGHITGTGSGNTDINGGGPLVSLSTQ 308
            +    SL A++  G + A    S+K T+  +TELG ITG   G +D+NGGG  +SL+T 
Sbjct: 234 QIDPDGSLTANTSAGSITAAFAPSMKYTLDTETELGQITGASRGQSDVNGGGAKISLTTS 293

Query: 309 IGSITV 314
           +GSI V
Sbjct: 294 VGSIKV 299


>B8I1F2.1 B8I1F2_CLOCE Putative uncharacterized protein
          Length = 300

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 25/228 (10%)

Query: 107 GEVKVTSGSSDSITVKATVVTHL---------GLNKETERKILDNAEVTVQADGDELKVS 157
           GEV     S+ +IT+K +  + L         GL  E  +    +  + ++ +G +L V 
Sbjct: 75  GEVLNIDNSAGNITIKESDDSKLVVEIQKKINGLPSEQIKDAFRSMNLCLEREGKDLNVV 134

Query: 158 THAKNEPQKNLWAWAQKKYGASNFTIDYEIEVPATIDEYDISNNVGAIQLKGLQGTFHIA 217
              K+    + W W + K G    ++++ + VP  I E + +   G I +K +      +
Sbjct: 135 LKTKD--GNDFWDWNKLKLGLFKGSVNFTVLVPKGIKEINTNTGAGNIDIKRISSQISAS 192

Query: 218 SDVGAIVMDNARFSGNSTVESNTGSIEL--DIRGMKTGSSLKASSDIGKVKAGLEDSLKC 275
           +  G I +D+    G + +E+ TG+++   DI  +   +S KAS+ +G V   + +  K 
Sbjct: 193 TGAGNIDLDDISAYGETVLETGTGNVDFNGDIDKV---TSFKASTGVGNVSLEVPEETKM 249

Query: 276 TVSAKTELGHITG---------TGSGNTDINGGGPLVSLSTQIGSITV 314
           +++A+T LGH++G           S N DINGGGP V L+T +G+  V
Sbjct: 250 SLNAETGLGHLSGFFISSDDKVKKSFNEDINGGGPEVKLTTGVGNTEV 297


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.307    0.123    0.327 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,639,101,390
Number of extensions: 63170623
Number of successful extensions: 179023
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 179038
Number of HSP's successfully gapped: 18
Length of query: 315
Length of database: 3,060,696,203
Length adjustment: 135
Effective length of query: 180
Effective length of database: 1,788,859,178
Effective search space: 321994652040
Effective search space used: 321994652040
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 131 (55.1 bits)