BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0529.0009.p
         (215 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6GCN4.1 A6GCN4_9DELT Trypsin-like serine protease                     59   4e-07
B9XRC3.1 B9XRC3_9BACT Peptidase S1 and S6 chymotrypsin/Hap             56   2e-06
B8CZR8.1 B8CZR8_HALOH 2-alkenal reductase EC=1.3.1.74                  55   5e-06

>A6GCN4.1 A6GCN4_9DELT Trypsin-like serine protease
          Length = 400

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 2/153 (1%)

Query: 60  ATAYHVVKGAERMEGIMADGTVISPIKVTTFDEXXXXXXXXXXXXXXXXXXGNGFAYLSM 119
           AT +HV++GA R+E  + DGT I  +++ T D                         L  
Sbjct: 235 ATNHHVIEGAGRIEVELIDGTTIDSVELLTSDPEVDLALLRIDPERVPESVALTVTTLG- 293

Query: 120 RKDAVRHGEAVFALGYPLKNTNIITEGIVNSPDAEINGRSRILASAQVASGMSGGPLIDA 179
             +AV  GE V  +G PL   + +T G+V++      G   I  SA ++ G SGGP+ D 
Sbjct: 294 DSEAVAVGEPVSVIGNPLGLDHTLTTGVVSA-RRIYEGERYIQMSAPISPGNSGGPVFDT 352

Query: 180 HGQLAGIISGSLRTMNNIHLIINMEDLRSLLPA 212
           HGQ+ G+    L    N++L + +  L  L+ A
Sbjct: 353 HGQVIGVSVAGLIGGQNLNLAVPVSQLSELIAA 385


>B9XRC3.1 B9XRC3_9BACT Peptidase S1 and S6 chymotrypsin/Hap
          Length = 287

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/65 (43%), Positives = 41/65 (63%)

Query: 122 DAVRHGEAVFALGYPLKNTNIITEGIVNSPDAEINGRSRILASAQVASGMSGGPLIDAHG 181
           DA+  GE+VFA+G PL     +TEGIV++   E+ G   +  +AQ+  G SGGPL +  G
Sbjct: 163 DALAVGESVFAIGSPLGLERTVTEGIVSTKTRELQGELYMQTTAQINPGNSGGPLFNMRG 222

Query: 182 QLAGI 186
           ++ GI
Sbjct: 223 EVVGI 227


>B8CZR8.1 B8CZR8_HALOH 2-alkenal reductase EC=1.3.1.74
          Length = 264

 Score = 54.7 bits (130), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 13/156 (8%)

Query: 61  TAYHVVKGAERMEGIMADGTVISPIKVTTFDEXXXXXXXXXXXXXXXXXXGNGFAYLSMR 120
           T YHVV+GAE++  ++ D   +   K+   D                      F  LS  
Sbjct: 112 TNYHVVQGAEKISVVIPDREKVYSGKMVGADAKNDLALIKINEKELP------FLELSTS 165

Query: 121 KDAVRHGEAVFALGYPLKNTNIITEGIVNSPDAEI---NG---RSRILASAQVASGMSGG 174
           +  +R GE V ALGYPL   N +T G+V++ +  I   NG   R+ I     +  G SGG
Sbjct: 166 R-RLRAGELVIALGYPLGLENTLTVGVVSALNRNIYTENGQKLRNLIQVDVAINPGNSGG 224

Query: 175 PLIDAHGQLAGIISGSLRTMNNIHLIINMEDLRSLL 210
           PL++  GQ+ GI +  +R    I   I +  +R  L
Sbjct: 225 PLLNDQGQVIGINTAIIRQGFGIGFAIPISTVRGFL 260


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.133    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 979,987,145
Number of extensions: 30756847
Number of successful extensions: 87874
Number of sequences better than 1.0e-05: 14
Number of HSP's gapped: 89302
Number of HSP's successfully gapped: 14
Length of query: 215
Length of database: 3,060,696,203
Length adjustment: 130
Effective length of query: 85
Effective length of database: 1,835,964,253
Effective search space: 156056961505
Effective search space used: 156056961505
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 128 (53.9 bits)