BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0529.0006.p (1587 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B8I5D8.1 B8I5D8_CLOCE Putative uncharacterized protein 97 2e-17 C1VX85.1 C1VX85_9EURY GLUG motif-containing protein 79 3e-12 A6VSI9.1 A6VSI9_MARMS Filamentous haemagglutinin family outer me... 76 3e-11 Q18DN4.1 HMU_HALWD Halomucin 70 2e-09 B6ISD4.1 B6ISD4_RHOCS The GLUG motif domain protein, putative 67 2e-08 >B8I5D8.1 B8I5D8_CLOCE Putative uncharacterized protein Length = 1977 Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 135/563 (23%), Positives = 232/563 (41%), Gaps = 120/563 (21%) Query: 1034 SYVDIDITGKAAGSASQSVFLGGLIGRNSAGSVEQSYSSSKVTANGKYTVVGGLVGE--- 1090 SY D+TG + +GGL+G AG++ + Y+ V+ + VGGLVG+ Sbjct: 1057 SYAAGDVTGNGSS-------IGGLVGS-CAGNIAECYAVGNVSG---VSYVGGLVGQANL 1105 Query: 1091 -------HTGGSIKNSYVAKSVNALGEQSYAGGFIGRITNGKVTNAYSAAEVTAKLDNNS 1143 + SI NS+ +V +YAGG +G + +G + N Y +T+K N Sbjct: 1106 NIYYNSTYYTCSISNSFSLGNVIGTDANAYAGGLLGYVYSGVLKNCYCTGSITSKGSN-- 1163 Query: 1144 YAGGFAGRYDNASKELLYKSYYIKDEARNINKDLPDFAEGKHRWLDVHVRLTTILSETLR 1203 GG G S + YY + I +DL D L+ ++ Sbjct: 1164 -TGGIIGY---GSPGTMTGCYYDSVASGYIPQDLYDVGR---------------LTSGMK 1204 Query: 1204 DREVFPGLSGWDFSRAWKYGSLNAEYKYPEVNREANTGG--------DAGGGVNSNINWY 1255 + + F WDF+ W ++ YP + G + GG ++ N Y Sbjct: 1205 EEDTF---GSWDFTSIW---TIETGSSYPYLRSLQKPTGVSSDLPSNEVAGGNGTSANPY 1258 Query: 1256 M----KDKDAIRFQISSEAELAGLAAIVNGTIAGVDKFDFADRTITVMNPIHIQSKQWTP 1311 + + ++I++ + S +L G I +++K+W P Sbjct: 1259 IIKTPQQLNSIKYDLQSYYKLGG--------------------------NIDLENKEWIP 1292 Query: 1312 IGDEEEHAFQGTLDGGGHLIDGLTMRSAVFSHSGLFGVIGAGGTVKNINLEPLTIAGSQF 1371 IG + AF G DG G+ I L++ + G FG T+KN+ + I G + Sbjct: 1293 IG-KNGVAFTGRFDGNGYTISNLSINQPTLDYVGFFGYT-ENATIKNLKIVNANITGRNY 1350 Query: 1372 AGAVAGRNLGTVSNI-DLKLLNGSKISG-GTVGSIIGENTGSVSALHLTLDGGSRIETVY 1429 G + G + G+ NI + + I G G VG ++G +G++S + T++ Sbjct: 1351 IGTLTGYSAGSSGNIMNCNVTGEGTIYGTGYVGGLVGSFSGNISGCYSTVN-----VVCG 1405 Query: 1430 TGGIAGGIIGDNTSELVYTADSDSTKALAASTYLLTAIDGSIGSSADQ------------ 1477 TGG AGG++G + + + + A+ T ++I G +GS Sbjct: 1406 TGGYAGGLVGYCINNTNFIPSINRSYAVGDVTGNGSSIGGLVGSCTGNIAECYAVGNVSG 1465 Query: 1478 -AVIGGIVGRQSGNV----TGMNEEVSSKY---RITSTGADSITGGLIGRYVSGSAKQLS 1529 + +GG+VG+ + N+ T +S+ + + T A++ GGL+G SG K Sbjct: 1466 VSYVGGLVGQANLNIYYNSTYYTCSISNSFSLGNVIGTNANAYAGGLLGYVYSGVLKNCY 1525 Query: 1530 LTFTDGRLEASGLDSVLGGVIGH 1552 T G + + G S GG+IG+ Sbjct: 1526 CT---GSITSKG--SYTGGIIGY 1543 Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 139/543 (25%), Positives = 228/543 (41%), Gaps = 99/543 (18%) Query: 1048 ASQSVFLGGLIGRNSAGSVEQSYSSSKVTANGKYTVVGGLVGEHT----------GGSIK 1097 +S S +GG+ G S G++ +SY++ V + +GGLVG+ +I Sbjct: 689 SSTSSIVGGIAGYCS-GNITESYATGNVKGT---SYIGGLVGQANLAFSYSSITYACTIS 744 Query: 1098 NSYVAKSVNALGEQSYAGGFIGRITNGKVTNAYSAAEVTAKLDNNSYAGGFAGRYDNASK 1157 NS+ SV SYAGG +G ++ G + N Y T + +S G G S Sbjct: 745 NSFSLGSVTGTDTNSYAGGLLGYVSGGTLKNCY----CTGSIITSSKGGYTGGIIGYISS 800 Query: 1158 ELLYKSYYIKDEARNINKDLPDFAEGKHRWLDVHVRLTTILSETLRDREVFPGLSGWDFS 1217 + YY +R I +D D RLT+ +++ + F SGWDFS Sbjct: 801 VTMTGCYYDSFASRYIPQDSYDIG-----------RLTSGMTK----KSTF---SGWDFS 842 Query: 1218 RAWK------YGSLNAEYKYPEVNREANTGGDAGGGVNSNINWYMKDKDAIRFQISSEAE 1271 W Y L K V+ TG D GG + N Y+ I + A+ Sbjct: 843 SVWSVEKGISYPYLKGLPKPARVSINLPTG-DVAGGDGTPENPYV---------IENAAQ 892 Query: 1272 LAGLAAIVNGTIAGVDKFDFADRTITVMNPIHIQSKQWTPIGDEEEHAFQGTLDGGGHLI 1331 + + KFD I + N +++++ +WTPIG AF G+ DG G I Sbjct: 893 INNI------------KFDIQSSYI-LYNDVNLENMEWTPIGTNGA-AFIGSFDGNGFTI 938 Query: 1332 DGLTMRSAVFSHSGLFGVIGAGGTVKNINLEPLTIAGSQFAGAVAGR--NLGTVSNIDLK 1389 L++ + G FG +KN+N+ +I G + GA+ G + Sbjct: 939 SNLSINQPTLDNIGFFGYTN-NAVIKNLNIINASITGRNYVGALTGYAAGSSGSIDDSSV 997 Query: 1390 LLNGSKISGGTVGSIIGENTGSVSALHLTLDGGSRIETVYTGGIAGGIIGDNTSELVYTA 1449 G+ G VG ++G +G++S + T++ S TGG AGG++G + + Sbjct: 998 SGTGTVTGTGYVGGLVGSFSGNISGCYSTINVVSG-----TGGYAGGLVGYCINNTNFIP 1052 Query: 1450 DSDSTKALAASTYLLTAIDGSIGSSADQ-------------AVIGGIVGRQSGNV----T 1492 + + A T ++I G +GS A + +GG+VG+ + N+ T Sbjct: 1053 SINRSYAAGDVTGNGSSIGGLVGSCAGNIAECYAVGNVSGVSYVGGLVGQANLNIYYNST 1112 Query: 1493 GMNEEVSSKY---RITSTGADSITGGLIGRYVSGSAKQLSLTFTDGRLEASGLDSVLGGV 1549 +S+ + + T A++ GGL+G SG K T G + + G ++ GG+ Sbjct: 1113 YYTCSISNSFSLGNVIGTDANAYAGGLLGYVYSGVLKNCYCT---GSITSKGSNT--GGI 1167 Query: 1550 IGH 1552 IG+ Sbjct: 1168 IGY 1170 Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 100/405 (24%), Positives = 168/405 (41%), Gaps = 80/405 (19%) Query: 1034 SYVDIDITGKAAGSASQSVFLGGLIGRNSAGSVEQSYSSSKVTANGKYTVVGGLVGE--- 1090 SY D+TG + +GGL+G G++ + Y+ V+ + VGGLVG+ Sbjct: 1430 SYAVGDVTGNGSS-------IGGLVGS-CTGNIAECYAVGNVSG---VSYVGGLVGQANL 1478 Query: 1091 -------HTGGSIKNSYVAKSVNALGEQSYAGGFIGRITNGKVTNAYSAAEVTAKLDNNS 1143 + SI NS+ +V +YAGG +G + +G + N Y +T+K S Sbjct: 1479 NIYYNSTYYTCSISNSFSLGNVIGTNANAYAGGLLGYVYSGVLKNCYCTGSITSK---GS 1535 Query: 1144 YAGGFAGRYDNASKELLYKSYYIKDEARNINKDLPDFAEGKHRWLDVHVRLTTILSETLR 1203 Y GG G S + YY + + +DL D RLT+ +++ Sbjct: 1536 YTGGIIGY---GSPGTMTGCYYDGVASGYMPQDLYDVG-----------RLTSAMTK--- 1578 Query: 1204 DREVFPGLSGWDFSRAW------KYGSLNAEYKYPEVNREANTGGDAGGGVNSNINWYMK 1257 + F GWDF+ W Y L K N N + GG ++ N Y+ Sbjct: 1579 -QSTF---GGWDFTSVWTIEPGISYPYLRNITKPHMSNIPMN---EVAGGDGTSANPYI- 1630 Query: 1258 DKDAIRFQISSEAELAGLAAIVNGTIAGVDKFDFADRTITVMNPIHIQSKQWTPIGDEEE 1317 I + A+L + K+D + + I +++ +WTPIG Sbjct: 1631 --------IENAAQLNSM------------KYDL-QSSYRLNGNIDLENIEWTPIGTYGA 1669 Query: 1318 HAFQGTLDGGGHLIDGLTMRSAVFSHSGLFGVIGAGGTVKNINLEPLTIAGSQFAGAVAG 1377 +F G+ DG G+ I L + ++G FG +K++ + ++I G + G++ G Sbjct: 1670 -SFTGSFDGNGYTISNLAINKPTSDYTGFFGYTN-NAVIKDLQINNVSILGKSYVGSLIG 1727 Query: 1378 RNLGTVSNIDLKLLNGSKISGGT--VGSIIGENTGSVSALHLTLD 1420 G+ NI ++GS GT VG + G G++ T++ Sbjct: 1728 YAAGSSGNIQGCSISGSGTINGTGYVGGLTGYFNGTIDKCSSTIN 1772 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/262 (25%), Positives = 121/262 (46%), Gaps = 37/262 (14%) Query: 1300 NPIHIQSKQWTPIGDEEEHAFQGTLDGGGHLIDGLTMRSAVFSHSGLFGVIGAGGTVKNI 1359 N ++ ++WTP+G + F G+ DG G+ I L + + G FG + V+N+ Sbjct: 534 NNVNFGGEEWTPVG-SISNPFTGSFDGNGYTISNLVINQPNSDYIGFFGYT-SNAAVRNV 591 Query: 1360 NLEPLTIAGSQFAGAVAGRNLGTVSNID--LKLLNGSKISGGTVGSIIGENTGSVSALHL 1417 N+ ++I+G + G++ G G +I+ G+ G +G ++G GS+ + Sbjct: 592 NISNVSISGRNYVGSIIGYATGGTGSIEGCSVTGTGAVTGTGYIGGLVGSFYGSIRDCYS 651 Query: 1418 TLDGGSRIETVYTGGIAGGIIGDNTSELVYTADSDSTKALAASTYLLTAIDGSIGSSADQ 1477 T++ GS TG AGG++G Y + S+S Y + S+ Sbjct: 652 TMNVGS------TGSYAGGLVG-------YLSYSESNLPGIIRCYTTGNV------SSTS 692 Query: 1478 AVIGGIVGRQSGNVTGMNEEVSSKYRITSTGADSITGGLIGR------YVSGS-AKQLSL 1530 +++GGI G SGN+T Y + S GGL+G+ Y S + A +S Sbjct: 693 SIVGGIAGYCSGNIT-------ESYATGNVKGTSYIGGLVGQANLAFSYSSITYACTISN 745 Query: 1531 TFTDGRLEASGLDSVLGGVIGH 1552 +F+ G + + +S GG++G+ Sbjct: 746 SFSLGSVTGTDTNSYAGGLLGY 767 >C1VX85.1 C1VX85_9EURY GLUG motif-containing protein Length = 2376 Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 131/502 (26%), Positives = 207/502 (41%), Gaps = 91/502 (18%) Query: 939 TIQNSRILGSINAVSPSSVIGGMVGENRSLIANNSITDKLPVSSKGDNAIFGGLAGRN-- 996 TI+N+ + G N +GG+VGE I +S+T ++ N GGLAG N Sbjct: 854 TIENATVTGDSN-------VGGLVGETTGTITGSSVTGRIT-----GNESVGGLAGANGV 901 Query: 997 ----TAAGTLYYTYSNANMTIXXXXXXXXXXXXXXXXQVIGSYVDIDITGKAAGSASQSV 1052 TA GT+ + ++A +T+ G+ + TG + SV Sbjct: 902 ESDDTAGGTIESSTASATVTVNASATAPTQFGGLVGQNYQGTVTTSNATGDVQAGDATSV 961 Query: 1053 FLGGLIGRNS----AGSVEQSYSSSKVTANGKYTVVGGLVGEHTGGSIKNSYVAKSVNAL 1108 GGL+G S + V SY++ VT + + VGG+ G +I +Y VN Sbjct: 962 --GGLVGYTSGTGASAVVNVSYATGNVTGSER---VGGIAGTTINATITQTYATGGVNG- 1015 Query: 1109 GEQSYAGGFIGRIT--NGKVTNAYSAAEVTAKLDNNSYAGGFAGRYDNASKELLYKSYY- 1165 + GG +G +T N +V AY+ VT NS GG G + + + SY+ Sbjct: 1016 --STDLGGLVGNVTGRNSEVVYAYAVGPVTG----NSSVGGLVGTTTDNPR--VANSYWD 1067 Query: 1166 IKDEARNINKDLPDFAEGKHRWLDVHVRLTTILSETLRDREVFPGLSGWDFSRAWKYGSL 1225 ++ ++ + L +F+ G+ + + V L +DF W Sbjct: 1068 VETTGQDNSAGLREFS-GR-------------TTAEMTGPSVRGSLGLFDFDATWDVLIS 1113 Query: 1226 NAEYKYPEVN---REANTGGDA----GGGVNSNI----NWYMKD--KDAIRFQISSEAEL 1272 N YP + +E G G G N NWY D ++ R + Sbjct: 1114 NGTVSYPSLRANPQEPAPGKRTLYADGNGTADNPYEIENWYHLDATRENPRANYT----- 1168 Query: 1273 AGLAAIVNGTIAGVDKFDFADRTITVMNPIHIQSKQWTPIGDEEEHAFQGTLDGGGHLID 1332 L A ++ AG D +V P + PIG + F+G DG GH I Sbjct: 1169 --LVADLDPETAGYD---------SVAAPSANGGHGFDPIG-ADRRGFEGEFDGEGHTIT 1216 Query: 1333 GLTMRSAVFSHSGLFGVIGAG----GTVKNINLEPLTIAGSQFAGAVA---GRNLGTVSN 1385 LT+ GLF ++ AG GTVKN+ L + I G++ G VA G+ T++N Sbjct: 1217 NLTIDRPGEDTVGLFAIVPAGQYADGTVKNLRLSNVDITGARSVGGVAGFHGQAAKTIAN 1276 Query: 1386 IDLK-LLNGSKISGGTVGSIIG 1406 + + ++G++ GG VG+ +G Sbjct: 1277 VSVSGTVDGTENVGGVVGTNLG 1298 Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 176/730 (24%), Positives = 290/730 (39%), Gaps = 125/730 (17%) Query: 848 IGGLVGYNDQSRLERLAGKTLNLTLNGPNVKTGGIAGYHLGTNTAVIANNYITALSLKTN 907 +GGLVG R++ T +++ G + GG+ G G +T+ I S T Sbjct: 404 VGGLVG----DSYGRVSNSTAAVSVTGSE-QVGGLVGLSSGYSTS----KGIVNTSHATG 454 Query: 908 ATAANSVIGGIVGLNAAQAGDPVPNPGTAVSTIQNSRILGSINAVSPSSVIGGMVGENRS 967 S +GG+VG N G P +A ++ S +G + IGG GE ++ Sbjct: 455 TVDGTSYVGGLVGRNYDGGGVPTVKTSSATGSVNGSDYVGGL--------IGGNSGETKT 506 Query: 968 LIANNSITDKLPVSSKGDNAIFGGLAGRN------TAAGTLYYTYSNANMTIXXXXXXXX 1021 A+ ++T V GGL G N T+ G++ + ++ + + Sbjct: 507 SNASGTVTGSESV---------GGLVGANGVESDGTSGGSIEASNASGEVALNANVRAGD 557 Query: 1022 XXXXXXXXQVIGSYVDIDITGKAAGSAS-QSVFLGGLIG----RNSAGSVEQSYSSSKVT 1076 GS + TG +G Q +GGL+G S ++ SY+ Sbjct: 558 KMGGLVGQLYGGSVTRSNATGDISGGFQFQGKNIGGLVGYADGTTSTATITDSYAVGDAL 617 Query: 1077 ANGKYTVVGGLVGEHTGGSIKNSYVAKSVNALGEQSYAGGFIGRIT--NGKVTNAYSAAE 1134 + + VGGLVG I +Y A G QS GG +G T N +V+N+Y+ Sbjct: 618 GDKR---VGGLVGTAIQTEINRTYATGG--ATGTQSNIGGLVGNATGTNTRVSNSYAVGS 672 Query: 1135 VTAKLDNNSYAGGFAGRYDNASKELLYKSYYIKDEARNINKDLPDFAEGKHRWLDVHVRL 1194 VT NS GG G ++ + + D ++N D + G Sbjct: 673 VTG----NSPVGGLIGTSEDGAS--------VTDAYWDLNTTGQDTSAGG---------- 710 Query: 1195 TTILSETLRDREVFPGLSGWDFSRAWKYGSLNAEYKYPEVNREANTGGDAGGGVNSNINW 1254 T + + L+ E L+G+ F+ W E YP + NT G+ S + Sbjct: 711 TGLTTSELKGNE---SLAGFTFTNTWGV-RTGGEVSYPYL---LNTTQSPAPGLES-LFA 762 Query: 1255 YMKDKDAIRFQISSEAELAGLAAIVNGTIAGVDKFDFADRTITVMNPIHIQSKQWTPIGD 1314 +A +++SS L +++ N + D A + +PI + TP Sbjct: 763 GGSGTEADPYELSSPDTLGSVSSAPNASYELTADLDMAGVS---HDPIGTAA---TP--- 813 Query: 1315 EEEHAFQGTLDGGGHLIDGLTMRSAVFSHSGLFGVIGAGGTVKNINLEPLTIAGSQFAGA 1374 F G+ DG G+ I LT+ + GLFG + GTV N+ +E T+ G G Sbjct: 814 -----FNGSFDGNGYTIANLTIDRPGEDNVGLFGHVATNGTVANVTIENATVTGDSNVGG 868 Query: 1375 VAGRNLGTVSNIDLKLLNGSKISGGTVGSIIGENTGSVSALHLTLDGGSRIETVYTGGIA 1434 + G GT++ GS ++G G+ E+ G L G + +E+ T A Sbjct: 869 LVGETTGTIT--------GSSVTGRITGN---ESVGG-------LAGANGVESDDT---A 907 Query: 1435 GGIIGDNTSELVYTADSDSTKALAASTYLLTAIDGSIGSS--------ADQAVIGGIVGR 1486 GG I +T+ T ++ +T + G++ +S D +GG+VG Sbjct: 908 GGTIESSTASATVTVNASATAPTQFGGLVGQNYQGTVTTSNATGDVQAGDATSVGGLVGY 967 Query: 1487 QSGNVTGMNEEVSSKYRITSTGADSITGGLIGRYVSGSAKQLSLTFTDGRLEASGLDSVL 1546 SG TG + V+ Y + GG+ G ++ + Q T+ G + S + L Sbjct: 968 TSG--TGASAVVNVSYATGNVTGSERVGGIAGTTINATITQ---TYATGGVNGS---TDL 1019 Query: 1547 GGVIGHAEAR 1556 GG++G+ R Sbjct: 1020 GGLVGNVTGR 1029 Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 122/485 (25%), Positives = 200/485 (41%), Gaps = 113/485 (23%) Query: 1045 AGSASQSVFLGGLIGRNSAGSVEQSYSSSKVTANGKYTVVGGLVGEHTG---GSIKNSYV 1101 AG ++ LGGL+G+ G+V QS ++ V A G T VGGLVG + +I+ +Y Sbjct: 54 AGDSTDPENLGGLVGQIFQGTVTQSNATGNVNA-GDATNVGGLVGYNDATEPSTIRETYA 112 Query: 1102 A--------------KSVNALGEQSYA----------GGFIGRITN--GKVTNAYSAAEV 1135 KSVN L +SYA GG +G T KV N+Y+A V Sbjct: 113 TGAVDGGNNVGGLVGKSVNDLVTESYAIGSVNGSASVGGLVGNNTGSIAKVNNSYAAGSV 172 Query: 1136 TAKLDNNSYAGGFAGRYDNASKELLYKSYYIKDEARNINKDLPDFAEGKHRWLDV-HVRL 1194 T AGG G +N + + +Y+ + + N+ + G L ++ Sbjct: 173 TGD-----SAGGLVGTIENGAS--VTDAYW---DTQTTNQS---SSAGNATGLTTSQLKA 219 Query: 1195 TTILSETLRDREVFPGLSGWDFSRAWKYGSLNAEYKYPEVNREANT----------GGDA 1244 T L+ +DF W E YP + + + GGD Sbjct: 220 NTSLA--------------FDFETTWAV-KTGVEKSYPYLLKNTQSPAPGLESLFPGGDG 264 Query: 1245 GGGVNSNI-NWYMKDKDAIRFQISSEAELAGLAAIVNGTIAGVDKFDFADRTITVMNPIH 1303 I +W D D +R + + L A ++ AG D +V + Sbjct: 265 TEASPYQIADW--NDLDNVRDALDANYTLV---ADLDENTAGYD---------SVASASA 310 Query: 1304 IQSKQWTPIGDEEEHAFQGTLDGGGHLIDGLTMRSAVFSHSGLFGVIGAGGTVKNINLEP 1363 K + P GD +F GT DG H I LT+ + LFG G GG + N++LE Sbjct: 311 NNDKGFDPFGDRG-ASFSGTFDGQDHTIANLTINRTDRDYVALFGRTG-GGMIVNVSLED 368 Query: 1364 LTIAGSQFAGAVAGRNLGTV--SNIDLKLLNGSKISGGTVGSIIGENTGSVSALHLTLDG 1421 + + G++ G++ G + G V ++ ++GS GG VG G + S +A+ +T G Sbjct: 369 VEVTGNRQVGSLVGSHGGGVVSASSATGTVDGSTSVGGLVGDSYGRVSNSTAAVSVT--G 426 Query: 1422 GSRIETVYTGGIAGGIIGDNTSELVYTADSDSTKALAASTYLLTAIDGSIGSSADQAVIG 1481 ++ GG++G ++ ++K + +++ +DG+ + +G Sbjct: 427 SEQV---------GGLVG-------LSSGYSTSKGIVNTSHATGTVDGT-------SYVG 463 Query: 1482 GIVGR 1486 G+VGR Sbjct: 464 GLVGR 468 >A6VSI9.1 A6VSI9_MARMS Filamentous haemagglutinin family outer membrane protein Length = 2744 Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 149/592 (25%), Positives = 233/592 (39%), Gaps = 138/592 (23%) Query: 869 NLTLNGPNVKTGGIAGYHLGTNTAVIANNYITALSLKTNATAANSVIGGIVGLNAAQAGD 928 NLT+N P+ G+ G + GT I L L + + +GG+VG N Sbjct: 605 NLTINAPDADNVGLIGTNDGT---------IRDLGLVGGSVTGHKNVGGLVGYNNG---- 651 Query: 929 PVPNPGTAVSTIQNSRILGSINAVSPSSVIGGMVGENRSLIANNSITDKLPVSSKGDNAI 988 TI N+ G+ V+ + +GG+VG N I+N T + + Sbjct: 652 ----------TISNAYATGT---VTGTDYVGGLVGYNNGTISNAYATGTVTGTD-----Y 693 Query: 989 FGGLAGRNTAAGTLYYTYSNANMTIXXXXXXXXXXXXXXXXQVIGSYVDIDITGKAAGSA 1048 GGL G+ GT Y+ TG GS Sbjct: 694 VGGLVGQQYTKGTTINAYA---------------------------------TGAVVGST 720 Query: 1049 SQSVFLGGLIGRNSAGSVEQSYSSSKVTANGKYTVVGGLVGEHTGGSIKNSYVAKSVNAL 1108 + GGL+G NS G + +SY++ V N GGLVG + G +I N+Y V+ Sbjct: 721 GSGQYAGGLVGDNS-GIISKSYATGGVVIN---RFAGGLVGRNQG-TISNTYATGMVSV- 774 Query: 1109 GEQSYA-GGFIGRITNGKVTNAYSAAEVTAKLDNNSYAGGFAGRYDNASKELLYKSYYIK 1167 +YA GG +G G ++N+YS V K G G S + S++ K Sbjct: 775 --ANYAVGGLVGE-NQGTISNSYSTGMV--KSGRGEIGGNTGGLVGYNSGGTITASFFDK 829 Query: 1168 DEARNINKDLPDFAEGKHRWLDVHVRLTTILSETLRDREVFPGLSGWDFSRAWKYGSLNA 1227 + + K + V +T + + RD + +GWDFS W Y S + Sbjct: 830 GTTK----------QDKGVSVGSSVGVTGLTTIEARDSSKY---TGWDFSTDW-YQSGDM 875 Query: 1228 EYKYPEVNREANTGGDAGGGVNSNINWYMKDKDAIRFQISSEAELAGLAAIVNGTIAGVD 1287 P + EA T A GGV +S+ ++A + A ++GT Sbjct: 876 R---PILRSEAAT---AVGGV---------------ISVSNLHQMALIGANLSGTYHLTR 914 Query: 1288 KFDFADRTITVMNPIHIQSKQW-----TPIGDEEEHAFQGTLDGGGHLIDGLTMRSAVFS 1342 D + + + S W P+G+ F GT DG H+I LT+ + Sbjct: 915 NIDAS--ATNAESETYSASSIWGSGGFVPLGNVST-PFSGTFDGQSHVISNLTINRPTKN 971 Query: 1343 HSGLFGVIGAGGTVKNINLEPLTIAGSQFAGAVAGRNLGTVSNIDLKLLNGSKISGGT-- 1400 GLFG +G G ++N+ + ++ G G + G N G ++N G+ I G+ Sbjct: 972 DIGLFGYVGTDGIIRNVGINGGSVTGHYNIGDLVGHNKGAINN---AYATGAVIGKGSTA 1028 Query: 1401 -VGSIIGENTGSVSALH----LTLDGGSRIETVYTGGIAGGIIGDNTSELVY 1447 VG ++G N GS++ + +T + SRI GG++G N + Y Sbjct: 1029 YVGGLVGVNDGSINNAYASGTVTGEASSRI---------GGLVGYNQGSISY 1071 >Q18DN4.1 HMU_HALWD Halomucin Length = 9159 Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 80/309 (25%), Positives = 135/309 (43%), Gaps = 56/309 (18%) Query: 1272 LAGLAAIVNGTIAGVDKFDFADRTITVMNPIHIQSKQWT------PIGDEEEHAFQGTLD 1325 LA L AI N T A D++ + ++ W PI + + AF GTL+ Sbjct: 4351 LADLQAIDNSTAAHGDQYTL----VANIDASATDESSWNGGGGFEPIANATDEAFTGTLN 4406 Query: 1326 GGGHLIDGLTMRSAVFSHSGLFGVIGAGGTVKNINLEPLTIAGSQFAGAVAGRNLGTVSN 1385 G GH I L++ + + +GL G +G+ GT++N+ ++ +I G+ G G + GT+ N Sbjct: 4407 GNGHTISNLSVDRSGANRAGLVGTLGSNGTIQNLTIQNASITGNNDVGTAVGTSAGTIQN 4466 Query: 1386 IDLK-LLNGSKISGGTVGSIIGENTGSVSALHLTLDGGSRI------------------E 1426 + +NG+ GG VG + + + S + G I E Sbjct: 4467 VTASGTVNGNDRIGGVVGEVTADGLVTDSTASVNTSGNQAIGGLVGQSSGAVNNASASGE 4526 Query: 1427 TVYTGGIAGGIIGDNTSELVYTADSDSTKALAASTYLLTAIDGSIGSSADQAVIGGIVGR 1486 T AGG+IGD+ ST +T ++ S G+ + + GG++GR Sbjct: 4527 VTATSKYAGGLIGDH-----------------QSTTPVTDVNAS-GTVSGTSSAGGLIGR 4568 Query: 1487 QSGNVTGMNEEVSSKYRITSTGADSITGGLIGRYVSGSAKQLSLTFTDGRLEASGLDSVL 1546 NVT + ++ + ST + GGLIG + +G + + G + + G D + Sbjct: 4569 AQANVT----DATATGDVVSTSGTKV-GGLIGNHQAG--QTIVDVSATGTVSSDGDD--V 4619 Query: 1547 GGVIGHAEA 1555 GG++G A Sbjct: 4620 GGLVGFTRA 4628 >B6ISD4.1 B6ISD4_RHOCS The GLUG motif domain protein, putative Length = 3658 Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 96/336 (28%), Positives = 144/336 (42%), Gaps = 68/336 (20%) Query: 1254 WYMKD---KDAIRFQISSEAELAGLAAIVNGTIAGVDKFDFADRTITVMNPIH-----IQ 1305 WYM D + +R + S A ++ ++ ++D MN + Sbjct: 2024 WYMVDGYTRPFLRMEYSKTISNAHQLQLI--SLDPSAQYDIVANI--TMNELTRTGSLWS 2079 Query: 1306 SKQWTPIG------DEEEHAFQGTLDGGGHLIDGLTMRSAVFSHSGLFGVIGAGGTVKNI 1359 S W PIG + AF G ++GGG+++ G+T+ + ++ GLF +IG GG V N+ Sbjct: 2080 SMGWVPIGFNTAGSNLSPTAFTGIVNGGGYVVSGMTISNGASNNLGLFSLIGPGGQVSNL 2139 Query: 1360 NL---EPLTIAGSQFAGAVAGRNLGTVSNIDLK---LLNGSKISGGTVGSIIGENTGSV- 1412 L T G G AG+N GTV+N+ + L G+ +S G +IG NTG + Sbjct: 2140 TLSNARVTTSTGVSQVGLFAGQNQGTVNNVFVSGALDLAGTAVSS---GGLIGLNTGRIN 2196 Query: 1413 -SALHLTLDGGSRIETVYTGGIAGGIIGDNTSELVYTADSDSTKALAASTYLLTAIDGSI 1471 SA H+T+ R G GG++G N+ +Y + GSI Sbjct: 2197 NSAAHVTVQVSGR------GQFIGGLVGQNSVGSIYGGYA----------------TGSI 2234 Query: 1472 GSSADQAVIGGIVGRQSGNVTG--MNEEVSSKYRITSTGADSITGGLIG----RYVSGSA 1525 S IGG+VG V G +N S+ T ADSI GGL+G +SGS Sbjct: 2235 TSGDGSFRIGGLVGTH---VAGGLINNAYSTVDLSIGTSADSI-GGLVGFNTNSTISGSY 2290 Query: 1526 KQLSLTFTDGRLEASGLDSVLGGVIGHAEARAVLAD 1561 S++ G SGL +G A++ D Sbjct: 2291 AANSISVGAGSSGVSGL-------VGSGSGTAIITD 2319 Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 148/601 (24%), Positives = 236/601 (39%), Gaps = 113/601 (18%) Query: 915 IGGIVGLNAAQAGDPVPNPGTAVSTIQNSRILGSINAVSPSSVIGGMVGENRSLIANNSI 974 +GG+VGLN N GT + +S G+I S S IGG+VG + LI+N Sbjct: 1128 VGGLVGLN---------NSGT----VSDSYATGNITLGSASQRIGGLVGYSTGLISNTYA 1174 Query: 975 TDKLPVSSKGDNAIFGGLAGRNTAAGTLYYTYSNANMTIXXXXXXXXXXXXXXXXQVIGS 1034 T + + +N GGL G L S A +V+ S Sbjct: 1175 TGNISLGGT-NNQYIGGLVGL------LAQPTSGAT-----------------SARVVAS 1210 Query: 1035 YVDIDIT-GKAAGSASQSVFLGGLIGRNSAGSVEQSYSSSKVTANGKYTVVGGLVGE--- 1090 + ++T G ++ + +++GGL+G V SY++ V T VGGLVG Sbjct: 1211 HATGNLTLGNSSAVGTAGIYVGGLVGLMQNAVVSSSYATGNVLMGRTSTYVGGLVGSIEA 1270 Query: 1091 --HTGGSIKNSYVAKSVNALGEQSYAGGFIGRITNGKVTNAYSAAEVTAKLDNNSYAGGF 1148 T S+ SY + +++ + GG +GR G ++ AY+ +TA Sbjct: 1271 FNLTMSSVLGSYASGTISIGSVATDIGGLVGRSNGGLISGAYANGTITAS---------- 1320 Query: 1149 AGRYDNASKELLYKSYYIKDEARNINKDLPDFAEGKHRWLDVHVRLTTILSETLRDREVF 1208 ++ + ++ P W V + + + +S + Sbjct: 1321 ------SAGTITGNGVGGLVGNHTVSGSFPSTL--LQAWSSVAINVPSTVSAGGAIGRML 1372 Query: 1209 PGLSG---WDFS---RAWKYG-SLNAEYKYPEVNREANTGGDAGGGVNSNINWYMKDKDA 1261 G WD R+ YG S Y ++ + G ++ WYM D Sbjct: 1373 AGTVSSAYWDVGVSGRSVGYGTSTGGSYSAAGISGAGAYAVASYGNLDFTNTWYMIDGST 1432 Query: 1262 IRFQISSEAELAGLAAIVNGTIAGVDKFDFADRTITVMN--------PIHIQSKQWTPIG 1313 F + +E + + I+N + F+ + N P + + + P+ Sbjct: 1433 RPF-LQAENQ----STIINAHQLQMIGFNPGGNYVLGANITLAGLTGPSSLWASGYVPL- 1486 Query: 1314 DEEEHAFQGTLDGGGHLIDGLTMRSAVFSHSGLFGVIGAGGTVKNINLEPLTIA-GSQFA 1372 A GTLDG GH I GLT+ S GLF IG+ G+V N+ L ++ G F Sbjct: 1487 -----ALSGTLDGRGHTISGLTLSSTSSGSLGLFSTIGSTGSVANLTLTGGSVTGGGDFL 1541 Query: 1373 GAVAGRNLGTVSNIDLKLLNGSKISGGTVGSIIGENTGSVSALHL--TLDGGSRIETVYT 1430 G +AG N G VS + + S G G ++G NTG++ + + T+ GS + V Sbjct: 1542 GLLAGLNQGRVSAVATNGGVTALGSAGYAGGMVGLNTGTIDSSYATGTVSAGSAAQMV-- 1599 Query: 1431 GGIAGGIIGDNTSELVYTADSDSTKALAASTYLLTAIDGSIGSSADQAVIGGIVGRQSGN 1490 GG+ G N D T + A++T GS A IGG+VGR +G Sbjct: 1600 ----GGLSGRN--------DGIVTNSYASATV-------RAGSGAQD--IGGLVGRNAGT 1638 Query: 1491 V 1491 + Sbjct: 1639 I 1639 Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 119/487 (24%), Positives = 195/487 (40%), Gaps = 120/487 (24%) Query: 939 TIQNSRILGSINAVSPSSVIGGMVGENRSLIANNSITDKLPVSSKGDNAIFGGLAGRNTA 998 TI NS G+++ S +S +GG+VG +S + G + GGLAG + Sbjct: 617 TIFNSYATGTLSITSATSNVGGLVGVQSGGTILSSWSGVTIAGGSGLTQV-GGLAGSLSD 675 Query: 999 AGTLYYTYSNANMTIXXXXXXXXXXXXXXXXQVIGSYVDIDITGKAAGSASQ-------- 1050 G++ +++ N+T+ + +G V +G +GS++ Sbjct: 676 GGSIGKSHAIGNVTVGSAG------------EAVGGLVGWLGSGTVSGSSASGTVRAGDG 723 Query: 1051 SVFLGGLIGRNSAGS--VEQSYSSSKVTANGKYTVVGGLVGEHTGGSIKNSYVAKSVNAL 1108 SV LGGL+G+ A + QSY+ V A + VGGLVGE GG+I +Y +V+ Sbjct: 724 SVKLGGLVGQQIASGTLITQSYADGGVLAGNSVSRVGGLVGE--GGAISAAYALGTVSVG 781 Query: 1109 GEQSYAGGFIGRITNGKVTNAYSAAEVTAKLDNNSYAGGFAGRYDNASKELLYKSYYIKD 1168 + GG +G + G ++ AY+ V + + + GGF G +N S + S+Y D Sbjct: 782 NGATAVGGLVGY-SGGAISGAYATGTVIST--SGTAIGGFIG--ENTSS--IAASFY--D 832 Query: 1169 EARN-INKDLPDFAEGKHRWLDVHVRLTTILSETLRDREVFPGLSGWDFSRAWKYGSLNA 1227 A + ++ D+ G + T LS T +G+DF+ Sbjct: 833 TATSGLSVDVGTVNGGTDAATPIGAN--TTLSATY---------AGFDFTT--------- 872 Query: 1228 EYKYPEVNREANTGGDAGGGVNSNINWYMKDKDAIRFQISSEAELAGLAAIVNGTIAGVD 1287 +W+M D F S + + I Sbjct: 873 -------------------------DWFMVDGRTRPFLRSEYSTI----------ITNAH 897 Query: 1288 KFDFADRTITV---------MNPIHIQSKQW-----TPIG------DEEEHAFQGTLDGG 1327 + +T + + +QS W TPIG + F G+LDG Sbjct: 898 QLQLVSMDVTADYLLGANIDLGRVTLQSDMWSTAGFTPIGFSTVSVNNSPAVFTGSLDGR 957 Query: 1328 GHLIDGLTMRSAVFSHSGLFGVIGAGGTVKNINLE--------PLTIAGSQFAGAVAGRN 1379 G I LT+ +++ GLF IG+ G+V N+ L P T+ + G +AG++ Sbjct: 958 GFTISNLTLNPVGYNNVGLFSSIGSTGSVANLTLSNGRMITGFPGTV--TNGWGLLAGKS 1015 Query: 1380 LGTVSNI 1386 GTVSN+ Sbjct: 1016 SGTVSNV 1022 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.311 0.131 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 9,477,526,729 Number of extensions: 435307544 Number of successful extensions: 1177883 Number of sequences better than 1.0e-05: 644 Number of HSP's gapped: 1162910 Number of HSP's successfully gapped: 2146 Length of query: 1587 Length of database: 3,060,696,203 Length adjustment: 150 Effective length of query: 1437 Effective length of database: 1,647,543,953 Effective search space: 2367520660461 Effective search space used: 2367520660461 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 138 (57.8 bits)