BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0526.0001.p (476 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7F2.1 B3K7F2_9BACI Glycosyl transferase family 2 256 3e-66 B7GKZ3.1 B7GKZ3_ANOFW Glycosyl transferase fused to TPR repeats 199 5e-49 A6M2I5.1 A6M2I5_CLOB8 Glycosyl transferase, family 2 183 3e-44 Q3ADF5.1 Q3ADF5_CARHZ Glycosyl transferase, group 2 family 179 5e-43 B1DEM9.1 B1DEM9_9BACL Glycosyl transferase family 2 162 5e-38 >B3K7F2.1 B3K7F2_9BACI Glycosyl transferase family 2 Length = 641 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 136/345 (39%), Positives = 197/345 (57%), Gaps = 4/345 (1%) Query: 4 LSVCMIVKDEEALLSRCLESVKGIADEIIIVDTGSTDRTKQIAENFGAKIYDYVWSNDFA 63 +S+CMIVKDEE ++SRCL+SV+G+ DEIII+DTGS D TK +A + +YD+ W NDF+ Sbjct: 5 ISLCMIVKDEEEVISRCLDSVQGLVDEIIIIDTGSVDNTKTVARRYTNHVYDFEWINDFS 64 Query: 64 AARNESLRHAAGKWILVLDADEYLGSNDHSKWIEFLQKEKP--QAQLAYTLPVINFTGEK 121 AARNESLR+A GKWILVLDADEY+ S+D I L+ + ++ LP+ NFTG+ Sbjct: 65 AARNESLRNATGKWILVLDADEYMNSSDIEGLITDLRATPTDKDSLKSFMLPIHNFTGQT 124 Query: 122 DYQEEMTTAPVTRLFPNFKGIHFERPIHEQLTRGGKEKLLHKKISLEIYHTGYQIQRVTE 181 + + R+F N KGI++ PIHEQLT + K+ + I+H GY RV Sbjct: 125 VDPSRVMISQGARIFENQKGIYYSNPIHEQLTSDHR-KITFNNLPYPIFHDGYTEIRVEN 183 Query: 182 KSKHERNMSIFNEMKKANKL-SAYDWFTLGNQYRFGKEDEEALQCYERAAKGATAKEAWY 240 +K ERN+SI MK KL Y F LGN + E A+Q Y + + +WY Sbjct: 184 HNKTERNLSILESMKTEEKLRDPYFCFILGNACTSDNQLERAIQLYRTSIASSAPSHSWY 243 Query: 241 SHCLMGLISLYFKNGRLDSSWRWTEKELYKYKDFSEYHTIKGVHFETLGFFDDAIASYLQ 300 H L LIS K ++ + + +Y + S+Y+ G+ +E G F AI ++ Q Sbjct: 244 VHLLDSLISTEIKLNNYVEAYHLILQAMTEYPEISDYYCHLGILYEQFGMFQQAIHNFEQ 303 Query: 301 AINTAEQRAKRNQEIWLVDPMYSFETPVQQLVDIYFRLNDNQQAI 345 A+ AE ++N+ W V P Y P+Q L +++ +L + A+ Sbjct: 304 ALTLAEMAVRQNRPYWNVQPSYGSSVPLQMLFNLHVQLGNKTDAV 348 >B7GKZ3.1 B7GKZ3_ANOFW Glycosyl transferase fused to TPR repeats Length = 651 Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 108/246 (43%), Positives = 155/246 (63%), Gaps = 4/246 (1%) Query: 4 LSVCMIVKDEEALLSRCLESVKGIADEIIIVDTGSTDRTKQIAENFGAKIYDYVWSNDFA 63 LS+CMIVK+EE +L RCL+SV I DEI+IVDTGSTD TK+IA + K+YD+ W+N FA Sbjct: 14 LSLCMIVKNEEKVLQRCLDSVHDIVDEIVIVDTGSTDGTKEIALKYTNKVYDFEWTNSFA 73 Query: 64 AARNESLRHAAGKWILVLDADEYLGSNDHSKWIEFLQKEKPQAQLAYTLPVINFTGEKDY 123 ARN + + A G+WILVLDADEY+ + + I+ L K+ ++ AY + + NF G Y Sbjct: 74 DARNFAQQQATGEWILVLDADEYVDRENLKEMIDIL-KQTDESVEAYDVVIYNFMGV--Y 130 Query: 124 QEEMTTAPVTRLFPNFKGIHFERPIHEQLTRGGKEKLLHKKISLEIYHTGYQIQRVTEKS 183 E + TR++ N + ++R IHEQL R E + + L +YHTGY Q VTEK Sbjct: 131 GERVLQHRHTRIYRNSPHLRYDRAIHEQLRRVDGEYVQASQGILTVYHTGYMHQAVTEKK 190 Query: 184 KHERNMSIFNEMKKANKLSAYDWFTLGNQYRFGKEDEEALQCYERAAK-GATAKEAWYSH 242 KH+RN + + K + A+D+F LGN+Y E E+AL+ + +A K + +W S+ Sbjct: 191 KHDRNAPLLEQEMKVGESVAFDYFNLGNEYLSKGEIEKALESFIKAYKEKKDIRLSWVSY 250 Query: 243 CLMGLI 248 CL+ +I Sbjct: 251 CLVQII 256 >A6M2I5.1 A6M2I5_CLOB8 Glycosyl transferase, family 2 Length = 595 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 100/251 (39%), Positives = 150/251 (59%), Gaps = 10/251 (3%) Query: 2 TQLSVCMIVKDEEALLSRCLESVKGIADEIIIVDTGSTDRTKQIAENFGAKIYDYVWSND 61 Q+S+CMIVKDEE L +CL+S+K I DEII+VDTGSTD+T +IA+N+GAKIY + W+N+ Sbjct: 3 NQVSLCMIVKDEEEYLPKCLKSIKDIVDEIIVVDTGSTDKTVEIAQNYGAKIYYFKWNNN 62 Query: 62 FAAARNESLRHAAGKWILVLDADEYLGSNDHSKWIEFLQKEKPQAQLAYTLPVINFTGEK 121 F+ ARNESL++A WI +LDAD+ L + L E + + Y +++ G Sbjct: 63 FSEARNESLKYATKDWIFILDADDELSLEGREAFKVLLDMELDEKAI-YHFETLSYYGSV 121 Query: 122 DYQEEMTTAPVTRLFPNFKGIHFERPIHEQLTR--GGKEKLLHKKISLEIYHTGYQIQRV 179 + RLF N++GIH+E +H QL R G + + ++IYH GY +R+ Sbjct: 122 IENGNIAVNLNPRLFKNYRGIHYEGEVHNQLIRVDGDYNAVCN---DVKIYHYGYLDKRI 178 Query: 180 TEKSKHERNMSIFNEMKKANKLSAYDWFTLGNQYRFGKEDE--EALQCYERAAKGATAKE 237 K K RN+ I NE K + + + +F LGN+Y G ED+ +AL+CY +A + T Sbjct: 179 ISKDKRNRNIPILNEQIKKDPNNKFAYFNLGNEY--GAEDDTNKALECYYKAYENFTPNI 236 Query: 238 AWYSHCLMGLI 248 + S ++ +I Sbjct: 237 GFGSLLILRII 247 >Q3ADF5.1 Q3ADF5_CARHZ Glycosyl transferase, group 2 family Length = 364 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 115/312 (36%), Positives = 179/312 (57%), Gaps = 16/312 (5%) Query: 3 QLSVCMIVKDEEALLSRCLESVKGIADEIIIVDTGSTDRTKQIAENFGAKIYDYVWSNDF 62 +LSVCMIVKDEE + CLESV+ IADEI++VDTGSTD TK IA +FGAKI+D+ W +DF Sbjct: 5 KLSVCMIVKDEERYIRNCLESVQDIADEIVVVDTGSTDNTKAIANDFGAKIFDFPWVDDF 64 Query: 63 AAARNESLRHAAGKWILVLDADEYLGSNDHSKWIEFLQKEKPQAQLAYTLPVINFTGEKD 122 +AARN SL A G W+L+LDADE L + K +E + K + +AY + VINF D Sbjct: 65 SAARNFSLEKATGDWVLLLDADEELDVSSKDKVLELVNKNE---NVAYLVNVINFL---D 118 Query: 123 YQEEMT-TAPVTRLFPNFKGIHFERPIHEQLTRGGKEKLLHKKISLEIYHTGYQIQRVTE 181 + ++ T TA LFP +F PIHEQL K+ + + ++ I H GY + V+ Sbjct: 119 FTKQRTVTAKRMLLFPMRAEPYFINPIHEQLR--FKKNVEIRDSTIIIKHYGYIPETVST 176 Query: 182 KSKHERNMSIF-----NEMKKAN-KLSAYDWFTLGNQYRFGKEDEEALQCYERAAKGATA 235 K K ERN+SI N ++ N ++ A++++ LG +Y +E E+ALQ ++++ Sbjct: 177 KKKSERNISILKKIANNSVENINVEIKAFNYYNLGVEYYRKQEYEKALQNFQKSFLLIRK 236 Query: 236 KEAWYSHCLM-GLISLYFKNGRLDSSWRWTEKELYKYKDFSEYHTIKGVHFETLGFFDDA 294 KE + + L+ +++ + + + E Y + + KGV + + + A Sbjct: 237 KEPGFKYALIWHIVNSLINLKKFQEALKVIEDAEQLYPWYVDLVYFKGVVYYSQRSYKKA 296 Query: 295 IASYLQAINTAE 306 I ++++ + E Sbjct: 297 IETFMKCLEIGE 308 >B1DEM9.1 B1DEM9_9BACL Glycosyl transferase family 2 Length = 502 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 114/344 (33%), Positives = 179/344 (52%), Gaps = 13/344 (3%) Query: 3 QLSVCMIVKDEEALLSRCLESVKGIADEIIIVDTGSTDRTKQIAENFGAKIYDYVWSNDF 62 ++S+CMIVK+EE L CL+SV GIADEII+VDTGSTD T IAE +GA++ W +DF Sbjct: 7 RISLCMIVKNEEKHLPGCLDSVLGIADEIIVVDTGSTDETIAIAERYGAQVIRSGWEHDF 66 Query: 63 AAARNESLRHAAGKWILVLDADEYLGSNDHSKWIEFLQKEKPQAQLAYTLPVINFTGEKD 122 A ARN+ + A+G+WIL LDADE L + + +E+ A+L+ L I D Sbjct: 67 AKARNKGVERASGEWILFLDADEQLDAATKPQLLEY----AGHAELSALLLQIRNQVGPD 122 Query: 123 YQEEMTTAPVTRLFPNFKGIHFERPIHEQLTRGGKEKLLHKKISLE---IYHTGYQIQRV 179 + + T PV R+F N FE IHEQ++ K + L I+H GY+ Q V Sbjct: 123 HDQGSTIHPVLRMFRNDPAHRFEGRIHEQISFSILRKNPSARFHLTDVIIHHYGYRTQVV 182 Query: 180 TEKSKHERNMSIFNEMKKANKLSAYDWFTLGNQYRFGKEDEEALQCYERAAKGATAKEAW 239 EK+K +RNM + + + + + +G +Y EEAL+ + A + A ++ Sbjct: 183 AEKNKLQRNMELLELALAEDPDNTFHRYNIGVEYLRNNRAEEALEAFRIAKRSAGFEQLS 242 Query: 240 YSHCLMGLISLYFK-NGRLDSSWRWTEKELYKYKDFSEYHTIKGVHFETLGFFDDAIASY 298 Y+H ++ SL + GR + + ++ + D+++ + + G F +A+ + Sbjct: 243 YAHLVLKYESLSLQLLGRWEEAAAPAKEGSAIFPDYTDLWHYIALCSASTGRFKNAMEAA 302 Query: 299 LQAINTAEQRAKRNQEIWLVDPMYSFETPVQQLVDIYFRLNDNQ 342 +A+ A+ + E D M +F T Q IY L+D Q Sbjct: 303 EKALELGAAPARYHTE----DGMGTFRTAYLQ-GRIYEALHDEQ 341 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.134 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,638,448,144 Number of extensions: 102832260 Number of successful extensions: 237406 Number of sequences better than 1.0e-05: 771 Number of HSP's gapped: 238158 Number of HSP's successfully gapped: 782 Length of query: 476 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 336 Effective length of database: 1,741,754,103 Effective search space: 585229378608 Effective search space used: 585229378608 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 133 (55.8 bits)