BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0523.0050.p (159 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B5Z5R4.1 B5Z5R4_BACCE Acetyltransferase, gnat family 161 2e-38 A9VJE7.1 A9VJE7_BACWK Isochorismatase hydrolase 143 4e-33 C2SLS7.1 C2SLS7_BACCE Acetyltransferase, GNAT 143 4e-33 C2XVK1.1 C2XVK1_BACCE Acetyltransferase, GNAT 143 5e-33 C2MM74.1 C2MM74_BACCE Acetyltransferase, GNAT 142 7e-33 >B5Z5R4.1 B5Z5R4_BACCE Acetyltransferase, gnat family Length = 178 Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 78/163 (47%), Positives = 109/163 (66%), Gaps = 4/163 (2%) Query: 1 MFSYPDMRLHDEEGVMDRIISLLHKARTAGTPVVYIQHTE---DQEYTKGTPTWEISSHV 57 MFSY L +E+ V+ I SL KA+ + P++YIQHT+ D ++G TWEI V Sbjct: 16 MFSYEGGSLWNEQQVLQNITSLREKAQQSNVPIIYIQHTDPSSDSILSEGKDTWEIHRDV 75 Query: 58 TPQEGELIIEKPTWDAFHLTRLHDELQKRGITDLVICGMQSEFCVDTTTRRAFSMGYS-S 116 P +++I+K +WDAF+ T LH +LQ+ I LV GMQ+EFC+DTT RRA+S+GY + Sbjct: 76 RPLPTDIVIQKSSWDAFYQTTLHKKLQELEIEKLVFAGMQTEFCLDTTCRRAYSLGYKEN 135 Query: 117 VLVEDAHSTFDNGSLSGGEIVKYHNSVLGGRFAKLRTAQEVEF 159 +LV+DAHSTFD LS +IV++HN+ LGGRF L+ E+ F Sbjct: 136 ILVKDAHSTFDTAVLSASKIVEHHNNTLGGRFVTLKEVNEIIF 178 >A9VJE7.1 A9VJE7_BACWK Isochorismatase hydrolase Length = 174 Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 70/152 (46%), Positives = 103/152 (67%), Gaps = 3/152 (1%) Query: 9 LHDEEGVMDRIISLLHKARTAGTPVVYIQHT--EDQEYTKGTPTWEISSHVTPQEGELII 66 +H+ E ++ + L+ + R+ G PV+Y+QH +D KGT W++ + + P+EGEL++ Sbjct: 21 VHNGEKFLETLQELIGECRSNGIPVIYVQHNGPKDHPLEKGTDGWKVHAAIAPREGELVV 80 Query: 67 EKPTWDAFHLTRLHDELQKRGITDLVICGMQSEFCVDTTTRRAFSMGYSSVLVEDAHSTF 126 EK T D+FH T L++ LQ +GI ++I GMQ+E+CVDTTTRRAFS GY LV DAHSTF Sbjct: 81 EKTTPDSFHKTNLNEVLQGKGIEHVIISGMQTEYCVDTTTRRAFSEGYKVTLVSDAHSTF 140 Query: 127 DNGSLSGGEIVKYHNSVLGGRFAKLRTAQEVE 158 D L +IVK+HN V G FA + T ++++ Sbjct: 141 DTDVLRAEDIVKHHNVVFGS-FADVITLKDLK 171 >C2SLS7.1 C2SLS7_BACCE Acetyltransferase, GNAT Length = 174 Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 70/152 (46%), Positives = 103/152 (67%), Gaps = 3/152 (1%) Query: 9 LHDEEGVMDRIISLLHKARTAGTPVVYIQHT--EDQEYTKGTPTWEISSHVTPQEGELII 66 +H+ E ++ + L+ + R+ G PV+Y+QH +D KGT W++ + + P+EGEL++ Sbjct: 21 VHNGEKFLETLQELIGECRSNGIPVIYVQHNGPKDHPLEKGTDGWKVHAAIAPREGELVV 80 Query: 67 EKPTWDAFHLTRLHDELQKRGITDLVICGMQSEFCVDTTTRRAFSMGYSSVLVEDAHSTF 126 EK T D+FH T L++ LQ +GI ++I GMQ+E+CVDTTTRRAFS GY LV DAHSTF Sbjct: 81 EKTTPDSFHKTNLNEVLQGKGIEHVIISGMQTEYCVDTTTRRAFSEGYKVTLVSDAHSTF 140 Query: 127 DNGSLSGGEIVKYHNSVLGGRFAKLRTAQEVE 158 D L +IVK+HN V G FA + T ++++ Sbjct: 141 DTDVLRAEDIVKHHNVVFGS-FADVITLKDLK 171 >C2XVK1.1 C2XVK1_BACCE Acetyltransferase, GNAT Length = 174 Score = 143 bits (360), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 70/152 (46%), Positives = 103/152 (67%), Gaps = 3/152 (1%) Query: 9 LHDEEGVMDRIISLLHKARTAGTPVVYIQHT--EDQEYTKGTPTWEISSHVTPQEGELII 66 +H+ E ++ + L+ + R+ G PV+Y+QH +D KGT W++ + + P+EGEL++ Sbjct: 21 VHNGEKFLETLQELIGECRSNGIPVIYVQHNGPKDHPLEKGTDGWKVHAAIAPREGELVV 80 Query: 67 EKPTWDAFHLTRLHDELQKRGITDLVICGMQSEFCVDTTTRRAFSMGYSSVLVEDAHSTF 126 EK T D+FH T L++ LQ +GI ++I GMQ+E+CVDTTTRRAFS GY LV DAHSTF Sbjct: 81 EKTTPDSFHKTNLNEVLQGKGIEHVIISGMQTEYCVDTTTRRAFSEGYKVTLVSDAHSTF 140 Query: 127 DNGSLSGGEIVKYHNSVLGGRFAKLRTAQEVE 158 D L +IVK+HN V G FA + T ++++ Sbjct: 141 DADVLRAEDIVKHHNVVFGS-FADVITLKDLK 171 >C2MM74.1 C2MM74_BACCE Acetyltransferase, GNAT Length = 176 Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 71/154 (46%), Positives = 100/154 (64%), Gaps = 3/154 (1%) Query: 7 MRLHDEEGVMDRIISLLHKARTAGTPVVYIQHT--EDQEYTKGTPTWEISSHVTPQEGEL 64 M +H+ E ++ + L+ K R+ PV+Y+QH +D KGT W+I + + P EGE Sbjct: 19 MPVHNGEKFLETLQELIEKCRSNDIPVIYVQHNGPKDHPLEKGTDGWKIHAAIAPLEGEC 78 Query: 65 IIEKPTWDAFHLTRLHDELQKRGITDLVICGMQSEFCVDTTTRRAFSMGYSSVLVEDAHS 124 ++EK T D+FH T L + LQ +GI ++I GMQ+E+CVDTTTRRAFS GY LV DAHS Sbjct: 79 VVEKTTPDSFHKTNLKEVLQDKGIDHVIISGMQTEYCVDTTTRRAFSEGYKVTLVSDAHS 138 Query: 125 TFDNGSLSGGEIVKYHNSVLGGRFAKLRTAQEVE 158 TFD L +IVK+HN V G FA + T ++++ Sbjct: 139 TFDTEVLRAEDIVKHHNVVFGA-FANVVTLKDLK 171 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.134 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 975,988,919 Number of extensions: 37978045 Number of successful extensions: 91032 Number of sequences better than 1.0e-05: 1368 Number of HSP's gapped: 90659 Number of HSP's successfully gapped: 1370 Length of query: 159 Length of database: 3,060,696,203 Length adjustment: 120 Effective length of query: 39 Effective length of database: 1,930,174,403 Effective search space: 75276801717 Effective search space used: 75276801717 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 125 (52.8 bits)