BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0523.0044.p (303 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A7GUN6.1 A7GUN6_BACCN UDP-N-acetylenolpyruvoylglucosamine reduct... 347 1e-93 Q72Y09.1 MURB2_BACC1 UDP-N-acetylenolpyruvoylglucosamine reducta... 339 2e-91 C2MT01.1 C2MT01_BACCE UDP-N-acetylenolpyruvoylglucosamine reductase 338 4e-91 C1EYG8.1 C1EYG8_BACC3 UDP-N-acetylenolpyruvoylglucosamine reduct... 338 5e-91 B9J4H2.1 B9J4H2_BACCQ UDP-N-acetylenolpyruvoylglucosamine reductase 338 5e-91 >A7GUN6.1 A7GUN6_BACCN UDP-N-acetylenolpyruvoylglucosamine reductase EC=1.1.1.158 Length = 304 Score = 347 bits (889), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 163/289 (56%), Positives = 213/289 (73%) Query: 1 MNISKIYEDLQQLVPTGMVKRGEVLESHVFTRIGGRADILAAPATYEELQSIVTYARVNE 60 MN+ ++Y+ L +++P VK+ E+L++H ++GG+AD+ P +Y E+Q +V YA + Sbjct: 1 MNMQEVYKYLSEILPENHVKQDEMLKNHTHIKVGGKADVFIMPTSYTEIQKVVKYASEHN 60 Query: 61 IPLTVLGNGSNVXXXXXXXXXXVLQTSDLTEMGLRDNVLYAQCGAKIIDVSRFALEKQLA 120 IP+T LGNGSNV L + +T++ ++ + AQ GA IIDVSR ALE L Sbjct: 61 IPITFLGNGSNVIIKDGGIRGITLSLTHITDITVQGTSIIAQSGAAIIDVSRTALEYSLT 120 Query: 121 GLEFACGIPGTVGGALYMNAGAYGGEIKDVLESALAISKAGRIVTLQGEELEWGYRKSVF 180 GLEFACGIPG+VGGALYMNAGAYGGEI VL AL +++AG ++TL ++ E+GYRKS F Sbjct: 121 GLEFACGIPGSVGGALYMNAGAYGGEISYVLTKALVMTEAGELITLTKDDFEFGYRKSTF 180 Query: 181 ASSEFIVLEARFALQPGDPAAIKAAMDDLTHQRESKQPLEYPSCGSVFKRPPGRFAGQLI 240 A++ +I+LE F L+ G+ A IKA MDDLT++RESKQPLEYPSCGSVFKRPP FAG+LI Sbjct: 181 ANNHYIILEGTFELEKGNYAEIKAKMDDLTYKRESKQPLEYPSCGSVFKRPPNHFAGKLI 240 Query: 241 QESGLQGTRIGGAEVSRKHAGFIVNTDHATAKDYIGLIQHVQATVKNKF 289 Q+SGLQG RIGG EVS KHAGF+VN D+ TA+DYI LI VQ TV+ KF Sbjct: 241 QDSGLQGKRIGGVEVSTKHAGFMVNVDNGTAQDYIDLIHFVQKTVEEKF 289 >Q72Y09.1 MURB2_BACC1 UDP-N-acetylenolpyruvoylglucosamine reductase 2 EC=1.1.1.158 Length = 305 Score = 339 bits (870), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 167/289 (57%), Positives = 207/289 (71%) Query: 1 MNISKIYEDLQQLVPTGMVKRGEVLESHVFTRIGGRADILAAPATYEELQSIVTYARVNE 60 MN+ ++YE L ++P G VK+ E+L++H ++GG+AD+ AP Y+E+Q ++ YA Sbjct: 1 MNMQEVYEYLSTVLPEGHVKQDEMLKNHTHIKVGGKADVFVAPTNYDEIQEVIKYANKYN 60 Query: 61 IPLTVLGNGSNVXXXXXXXXXXVLQTSDLTEMGLRDNVLYAQCGAKIIDVSRFALEKQLA 120 IP+T LGNGSNV + +T + + + AQCGA IIDVSR ALE L Sbjct: 61 IPVTFLGNGSNVIIKDGGIRGITVSLIHITGVTVTGTTIVAQCGAAIIDVSRIALEHNLT 120 Query: 121 GLEFACGIPGTVGGALYMNAGAYGGEIKDVLESALAISKAGRIVTLQGEELEWGYRKSVF 180 GLEFACGIPG+VGGALYMNAGAYGGEI VL A+ ++ G + TL E E+GYRKSVF Sbjct: 121 GLEFACGIPGSVGGALYMNAGAYGGEISYVLTEAVVMTGDGELRTLTKEAFEFGYRKSVF 180 Query: 181 ASSEFIVLEARFALQPGDPAAIKAAMDDLTHQRESKQPLEYPSCGSVFKRPPGRFAGQLI 240 A++ +I+LEARF L+ G IKA MDDLT +RESKQPLEYPSCGSVFKRPP FAG+LI Sbjct: 181 ANNHYIILEARFELEEGVYEEIKAKMDDLTFKRESKQPLEYPSCGSVFKRPPNNFAGKLI 240 Query: 241 QESGLQGTRIGGAEVSRKHAGFIVNTDHATAKDYIGLIQHVQATVKNKF 289 QESGLQG RIGG EVS KHAGF+VN D+ TA+DYI LI VQ TV+ KF Sbjct: 241 QESGLQGKRIGGVEVSLKHAGFMVNVDNGTAQDYIDLIHFVQKTVEEKF 289 >C2MT01.1 C2MT01_BACCE UDP-N-acetylenolpyruvoylglucosamine reductase Length = 305 Score = 338 bits (866), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 166/289 (57%), Positives = 207/289 (71%) Query: 1 MNISKIYEDLQQLVPTGMVKRGEVLESHVFTRIGGRADILAAPATYEELQSIVTYARVNE 60 MN+ ++YE L ++P G VK+ E+L++H ++GG+AD+ AP Y+E+Q ++ YA Sbjct: 1 MNMQEVYEYLSTVLPEGHVKQDEMLKNHTHIKVGGKADVFVAPTNYDEIQEVIKYANKYN 60 Query: 61 IPLTVLGNGSNVXXXXXXXXXXVLQTSDLTEMGLRDNVLYAQCGAKIIDVSRFALEKQLA 120 IP+T LGNGSNV + +T + + + AQCGA IIDVSR ALE L Sbjct: 61 IPVTFLGNGSNVIIKDGGIRGITVSLIHITGVTVTGTTIVAQCGAAIIDVSRIALEHNLT 120 Query: 121 GLEFACGIPGTVGGALYMNAGAYGGEIKDVLESALAISKAGRIVTLQGEELEWGYRKSVF 180 GLEFACGIPG+VGGALYMNAGAYGGEI VL A+ ++ G + TL E E+GYRKSVF Sbjct: 121 GLEFACGIPGSVGGALYMNAGAYGGEISYVLTEAVVMTGDGELRTLTKEAFEFGYRKSVF 180 Query: 181 ASSEFIVLEARFALQPGDPAAIKAAMDDLTHQRESKQPLEYPSCGSVFKRPPGRFAGQLI 240 A++ +I+LEARF L+ G IKA MDDLT +RESKQPLEYPSCGSVFKRPP FAG+LI Sbjct: 181 ANNHYIILEARFELEEGVHEEIKAKMDDLTFKRESKQPLEYPSCGSVFKRPPNNFAGKLI 240 Query: 241 QESGLQGTRIGGAEVSRKHAGFIVNTDHATAKDYIGLIQHVQATVKNKF 289 Q+SGLQG RIGG EVS KHAGF+VN D+ TA+DYI LI VQ TV+ KF Sbjct: 241 QDSGLQGKRIGGVEVSLKHAGFMVNVDNGTAQDYIDLIHFVQKTVEEKF 289 >C1EYG8.1 C1EYG8_BACC3 UDP-N-acetylenolpyruvoylglucosamine reductase EC=1.1.1.158 Length = 305 Score = 338 bits (866), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 166/289 (57%), Positives = 207/289 (71%) Query: 1 MNISKIYEDLQQLVPTGMVKRGEVLESHVFTRIGGRADILAAPATYEELQSIVTYARVNE 60 MN+ ++YE L ++P G VK+ E+L++H ++GG+AD+ AP Y+E+Q ++ YA Sbjct: 1 MNMQEVYEYLSTVLPEGHVKQDEMLKNHTHIKVGGKADVFVAPTNYDEIQKVIKYANKYN 60 Query: 61 IPLTVLGNGSNVXXXXXXXXXXVLQTSDLTEMGLRDNVLYAQCGAKIIDVSRFALEKQLA 120 IP+T LGNGSNV + +T + + + AQCGA IIDVSR AL+ L Sbjct: 61 IPVTFLGNGSNVIIKDGGIRGITVSLIHITGVTVTGTTIVAQCGAAIIDVSRIALDHNLT 120 Query: 121 GLEFACGIPGTVGGALYMNAGAYGGEIKDVLESALAISKAGRIVTLQGEELEWGYRKSVF 180 GLEFACGIPG+VGGALYMNAGAYGGEI VL A+ ++ G + TL E E+GYRKSVF Sbjct: 121 GLEFACGIPGSVGGALYMNAGAYGGEISYVLTEAVVMTGDGELRTLTKEAFEFGYRKSVF 180 Query: 181 ASSEFIVLEARFALQPGDPAAIKAAMDDLTHQRESKQPLEYPSCGSVFKRPPGRFAGQLI 240 A++ +I+LEARF L+ G IKA MDDLT +RESKQPLEYPSCGSVFKRPP FAG+LI Sbjct: 181 ANNHYIILEARFELEEGVYEEIKAKMDDLTFKRESKQPLEYPSCGSVFKRPPNNFAGKLI 240 Query: 241 QESGLQGTRIGGAEVSRKHAGFIVNTDHATAKDYIGLIQHVQATVKNKF 289 QESGLQG RIGG EVS KHAGF+VN D+ TA+DYI LI VQ TV+ KF Sbjct: 241 QESGLQGKRIGGVEVSLKHAGFMVNVDNGTAQDYIDLIHFVQKTVEEKF 289 >B9J4H2.1 B9J4H2_BACCQ UDP-N-acetylenolpyruvoylglucosamine reductase Length = 305 Score = 338 bits (866), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 166/289 (57%), Positives = 207/289 (71%) Query: 1 MNISKIYEDLQQLVPTGMVKRGEVLESHVFTRIGGRADILAAPATYEELQSIVTYARVNE 60 MN+ ++YE L ++P G VK+ E+L++H ++GG+AD+ AP Y+E+Q ++ YA Sbjct: 1 MNMQEVYEYLSTVLPEGHVKQDEMLKNHTHIKVGGKADVFVAPTNYDEIQKVIKYANKYN 60 Query: 61 IPLTVLGNGSNVXXXXXXXXXXVLQTSDLTEMGLRDNVLYAQCGAKIIDVSRFALEKQLA 120 IP+T LGNGSNV + +T + + + AQCGA IIDVSR AL+ L Sbjct: 61 IPVTFLGNGSNVIIKDGGIRGITVSLIHITGVTVTGTTIVAQCGAAIIDVSRIALDHNLT 120 Query: 121 GLEFACGIPGTVGGALYMNAGAYGGEIKDVLESALAISKAGRIVTLQGEELEWGYRKSVF 180 GLEFACGIPG+VGGALYMNAGAYGGEI VL A+ ++ G + TL E E+GYRKSVF Sbjct: 121 GLEFACGIPGSVGGALYMNAGAYGGEISYVLTEAVVMTGDGELRTLTKEAFEFGYRKSVF 180 Query: 181 ASSEFIVLEARFALQPGDPAAIKAAMDDLTHQRESKQPLEYPSCGSVFKRPPGRFAGQLI 240 A++ +I+LEARF L+ G IKA MDDLT +RESKQPLEYPSCGSVFKRPP FAG+LI Sbjct: 181 ANNHYIILEARFELEEGVYEEIKAKMDDLTFKRESKQPLEYPSCGSVFKRPPNNFAGKLI 240 Query: 241 QESGLQGTRIGGAEVSRKHAGFIVNTDHATAKDYIGLIQHVQATVKNKF 289 QESGLQG RIGG EVS KHAGF+VN D+ TA+DYI LI VQ TV+ KF Sbjct: 241 QESGLQGKRIGGVEVSLKHAGFMVNVDNGTAQDYIDLIHFVQKTVEEKF 289 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.135 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,579,736,810 Number of extensions: 61166452 Number of successful extensions: 147267 Number of sequences better than 1.0e-05: 1381 Number of HSP's gapped: 145486 Number of HSP's successfully gapped: 1384 Length of query: 303 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 168 Effective length of database: 1,788,859,178 Effective search space: 300528341904 Effective search space used: 300528341904 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)