BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0523.0032.p
         (107 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K6F7.1 B3K6F7_9BACI Putative uncharacterized protein                154   3e-36
B1DIX1.1 B1DIX1_9BACL Putative uncharacterized protein                114   3e-24
C0Z4Y0.1 C0Z4Y0_BREBN Conserved hypothetical membrane protein         100   6e-20
C0ZGW1.1 C0ZGW1_BREBN Conserved hypothetical membrane protein          90   6e-17
B3KBL2.1 B3KBL2_9BACI Putative uncharacterized protein                 88   2e-16

>B3K6F7.1 B3K6F7_9BACI Putative uncharacterized protein
          Length = 439

 Score =  154 bits (388), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 75/109 (68%), Positives = 95/109 (87%), Gaps = 2/109 (1%)

Query: 1   MEEIVGEIQDEFDEERPGVEKLGEDEFSIDGLMLIEEINDRLGLNMETDDYDTIGGWLYS 60
           MEEIVGEIQDEFDEERPG+EK+GEDE+SIDGLMLI+EIND+ GLN++T+DYDTIGGWL +
Sbjct: 331 MEEIVGEIQDEFDEERPGIEKVGEDEYSIDGLMLIDEINDQFGLNVDTEDYDTIGGWLSA 390

Query: 61  KLEVNPPQKGQTVEFDSHLFVVEETDNKRISRIKVMK--VQFLTEEAGA 107
           +LEV  P KGQ+V ++   FV+EET+NKRISRI++++   Q + EEAGA
Sbjct: 391 RLEVLLPHKGQSVIYEDCRFVIEETENKRISRIRLIRQEQQLIQEEAGA 439


>B1DIX1.1 B1DIX1_9BACL Putative uncharacterized protein
          Length = 466

 Score =  114 bits (285), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 55/99 (55%), Positives = 77/99 (77%), Gaps = 2/99 (2%)

Query: 1   MEEIVGEIQDEFDEERPGVEKLGEDEFSIDGLMLIEEINDRLGLNMETDDYDTIGGWLYS 60
           MEEIVGEIQDEFDEER  +EK  E  +SI G+MLIEE+N   G+++E+D+YDTIGGW+YS
Sbjct: 346 MEEIVGEIQDEFDEERAEIEKRDESVYSISGMMLIEEVNSYFGIDIESDNYDTIGGWMYS 405

Query: 61  KLEVNPPQKGQTVEFDS-HLFVVEETDNKRISRIKVMKV 98
           ++E+ PP   Q +++   + F++EETD+ RISR+ V K+
Sbjct: 406 QIEI-PPTSEQRIDYGGEYAFIIEETDHLRISRVLVKKL 443


>C0Z4Y0.1 C0Z4Y0_BREBN Conserved hypothetical membrane protein
          Length = 445

 Score =  100 bits (248), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 47/99 (47%), Positives = 76/99 (76%), Gaps = 2/99 (2%)

Query: 1   MEEIVGEIQDEFDEERPGVEKLGEDEFSIDGLMLIEEINDRLGLNMETDDYDTIGGWLYS 60
           +EEIVG+IQDEFDEERP +EKL ++  S+ G++++ ++ND L   +E++D DTIGGWLYS
Sbjct: 336 LEEIVGDIQDEFDEERPEIEKL-DNGLSVSGMLVLADLNDHLPFELESEDVDTIGGWLYS 394

Query: 61  KLEVNPPQKGQTVEFDSHLFVVEETDNKRISRIKVMKVQ 99
           +LE +    G TVE+++HLF V++ D+ R++R+ +  ++
Sbjct: 395 QLEEDIA-VGATVEWENHLFTVKQMDHHRVTRVLITHME 432


>C0ZGW1.1 C0ZGW1_BREBN Conserved hypothetical membrane protein
          Length = 443

 Score = 90.1 bits (222), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 2/98 (2%)

Query: 1   MEEIVGEIQDEFDEERPGVEKLGEDEFSIDGLMLIEEINDRLGLNMETDDYDTIGGWLYS 60
           MEEIVG+IQDEFD+ERP VE+  +   S+DG ML+EE  D L + +E+ D DT+ GW+Y 
Sbjct: 338 MEEIVGDIQDEFDDERPEVER-SDGMLSLDGRMLLEEAGDYLDIELESSDVDTLAGWIYM 396

Query: 61  KLEVNPPQKGQTVEFDSHLFVVEETDNKRISRIKVMKV 98
           +++ +PP+ G  V    + F+V E D+ RI+R+ V KV
Sbjct: 397 QID-HPPRVGDRVREGKYEFIVGEVDHYRITRVYVKKV 433


>B3KBL2.1 B3KBL2_9BACI Putative uncharacterized protein
          Length = 442

 Score = 88.2 bits (217), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 68/95 (71%), Gaps = 2/95 (2%)

Query: 1   MEEIVGEIQDEFDEERPGVEKLGEDEFSIDGLMLIEEINDRLGLNMETDDYDTIGGWLYS 60
           +EEIVG++ DEF++ERP +E + ++ FS+DG MLIEE+ND  GL ++  D D+IGGWL+ 
Sbjct: 339 LEEIVGDLYDEFEDERPEIE-VYDESFSVDGRMLIEEVNDLTGLMIDEHDVDSIGGWLFK 397

Query: 61  KLEVNPPQKGQTVEFDSHLFVVEETDNKRISRIKV 95
           +LE N P  G+   FD  +F VEE+   R++R+ +
Sbjct: 398 ELEGN-PAVGKRATFDGVVFEVEESTRLRVTRVMI 431


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.313    0.137    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 655,625,734
Number of extensions: 25845329
Number of successful extensions: 50783
Number of sequences better than 1.0e-05: 1419
Number of HSP's gapped: 50200
Number of HSP's successfully gapped: 1419
Length of query: 107
Length of database: 3,060,696,203
Length adjustment: 75
Effective length of query: 32
Effective length of database: 2,354,120,078
Effective search space: 75331842496
Effective search space used: 75331842496
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 125 (52.8 bits)