BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0523.0026.p
         (123 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K6H2.1 B3K6H2_9BACI Putative uncharacterized protein                159   6e-38
A8MF26.1 A8MF26_ALKOO Conserved domain protein, histidine-rich        116   7e-25
C0D4R0.1 C0D4R0_9CLOT Putative uncharacterized protein                110   5e-23
A8S1X7.1 A8S1X7_9CLOT Putative uncharacterized protein                107   3e-22
C5EKA8.1 C5EKA8_9FIRM Putative uncharacterized protein                106   8e-22

>B3K6H2.1 B3K6H2_9BACI Putative uncharacterized protein
          Length = 138

 Score =  159 bits (403), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 68/117 (58%), Positives = 95/117 (81%)

Query: 1   MFDLTGTVIPIFLAVVIGIIAVSAGRGLLQWNRNNKSPIMTIPARIVSKRSEVRQQQLQD 60
           MFD  G+V+P+F  VVIGII +SAG+G+LQW++NN+ P++++ ++IVSKR+EV+  Q  D
Sbjct: 8   MFDFFGSVMPVFFIVVIGIILLSAGKGILQWSQNNRQPLLSVDSKIVSKRTEVKHTQQTD 67

Query: 61  DSNNSRTSTTYYLTYESDRGERMEFKVDGNEYGMSAEGDRGILTYQGTRYHGFRRQP 117
           D+ +SRT TTYYLT+E + G+RMEF V+G E+GM AEGD G+L +QGTRY+GF R P
Sbjct: 68  DTMSSRTRTTYYLTFEVESGDRMEFAVNGEEFGMCAEGDEGLLRFQGTRYYGFVRHP 124


>A8MF26.1 A8MF26_ALKOO Conserved domain protein, histidine-rich
          Length = 122

 Score =  116 bits (290), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 76/117 (64%), Gaps = 1/117 (0%)

Query: 1   MFDLTGTVIPIFLAVVIGIIAVSAGRGLLQWNRNNKSPIMTIPARIVSKRSEV-RQQQLQ 59
            + +   + P+F   +  II  +  +G+ +W+ NNK P++++PA+IV+KR+   R     
Sbjct: 5   FYGIMDLMFPLFFITIFSIIVFAFFKGIREWSNNNKQPVLSVPAKIVAKRNHTSRSTSNH 64

Query: 60  DDSNNSRTSTTYYLTYESDRGERMEFKVDGNEYGMSAEGDRGILTYQGTRYHGFRRQ 116
           D  ++  TST YY+T+E + G+RMEF V G EYG+ AEGD G LT+QGTRYH F R+
Sbjct: 65  DGHHHHSTSTNYYITFEVESGDRMEFYVSGKEYGLLAEGDIGKLTFQGTRYHKFERE 121


>C0D4R0.1 C0D4R0_9CLOT Putative uncharacterized protein
          Length = 127

 Score =  110 bits (274), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 81/120 (67%), Gaps = 5/120 (4%)

Query: 2   FDLTGTVIPIFLA----VVIGIIAVSAGRGLLQWNRNNKSPIMTIPARIVSKRSEVRQQQ 57
           F +  T+ P+       +++G++ ++  R   +W+ NN SP++++ AR+VSKR+ + +  
Sbjct: 6   FGIMDTIFPLMFGAVFLLIVGVMILALVRSASEWSSNNSSPVLSVDARVVSKRTNITRHM 65

Query: 58  LQDDSNN-SRTSTTYYLTYESDRGERMEFKVDGNEYGMSAEGDRGILTYQGTRYHGFRRQ 116
            Q DS++ +R ST YY T++ + G+RME ++ G EYG+ AEGDRG LT+QGTRY GF R+
Sbjct: 66  SQADSSHMTRNSTVYYATFQVESGDRMELRMSGREYGLLAEGDRGKLTFQGTRYRGFERR 125


>A8S1X7.1 A8S1X7_9CLOT Putative uncharacterized protein
          Length = 148

 Score =  107 bits (268), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 74/115 (64%), Gaps = 7/115 (6%)

Query: 8   VIPIFLAVVIGIIAVSAGRGLLQWNRNNKSPIMTIPARIVSKRSEVRQQQLQDDSN---- 63
           +  +   ++IGI  V+A +GL QWN+NN  P +++ A +VSKR+ V +    +  +    
Sbjct: 27  MFTLVFVLIIGIFVVTAVKGLSQWNKNNHCPRLSVTASVVSKRTNVSRHSHPNAGDATGA 86

Query: 64  ---NSRTSTTYYLTYESDRGERMEFKVDGNEYGMSAEGDRGILTYQGTRYHGFRR 115
              +S TST+YY T++ + G+RME  V G EYG+ AEGDRG LT+QGTRY GF R
Sbjct: 87  HGFHSTTSTSYYATFQVESGDRMELSVTGTEYGLLAEGDRGKLTFQGTRYLGFER 141


>C5EKA8.1 C5EKA8_9FIRM Putative uncharacterized protein
          Length = 134

 Score =  106 bits (264), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 48/115 (41%), Positives = 75/115 (65%), Gaps = 7/115 (6%)

Query: 8   VIPIFLAVVIGIIAVSAGRGLLQWNRNNKSPIMTIPARIVSKRSEVRQQQLQDDSN---- 63
           +  +   +VIG+  V A +G+ QWN+NN+SP +T+PA + +KR+ V   +  +  +    
Sbjct: 13  IFSLMFVIVIGMFVVVAVKGIGQWNKNNQSPRLTVPASVTAKRTNVSHHRHANAGDMTGA 72

Query: 64  ---NSRTSTTYYLTYESDRGERMEFKVDGNEYGMSAEGDRGILTYQGTRYHGFRR 115
              +S +ST+YY+T++ + G+RME  V G EYGM +EGD G L++QGTRY GF R
Sbjct: 73  HGFHSTSSTSYYVTFQVESGDRMELSVTGREYGMLSEGDTGKLSFQGTRYLGFER 127


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.318    0.134    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 745,425,298
Number of extensions: 28240637
Number of successful extensions: 73038
Number of sequences better than 1.0e-05: 30
Number of HSP's gapped: 73099
Number of HSP's successfully gapped: 30
Length of query: 123
Length of database: 3,060,696,203
Length adjustment: 89
Effective length of query: 34
Effective length of database: 2,222,225,868
Effective search space: 75555679512
Effective search space used: 75555679512
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)