BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0523.0004.p (426 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B8GJF1.1 B8GJF1_METPE Amino acid permease-associated region 398 e-109 Q2FQG6.1 Q2FQG6_METHJ Amino acid permease-associated region 376 e-102 C0ZGB7.1 C0ZGB7_BREBN Conserved hypothetical membrane protein 366 2e-99 Q2FNH7.1 Q2FNH7_METHJ Amino acid permease-associated region 354 9e-96 Q394Z4.1 Q394Z4_BURS3 Putative amino acid transporter 183 3e-44 >B8GJF1.1 B8GJF1_METPE Amino acid permease-associated region Length = 431 Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust. Identities = 205/419 (48%), Positives = 278/419 (66%), Gaps = 1/419 (0%) Query: 1 MPQAIALYIGAVLGSGVLIVPGLAAEMAGPASLLAWGFMTLLILPLALSMGLLSARFPNA 60 +PQ IALYIGAVLGSG+L++PG+ AE AGPASLLAW M++L++P+AL+MGLLS ++PN+ Sbjct: 13 LPQLIALYIGAVLGSGILMLPGVVAESAGPASLLAWILMSILVIPMALTMGLLSIKYPNS 72 Query: 61 GGVSHFVTLAFGPKAGALVGWFFLMSVPIGGPVAALTGAGYMTAAMGWGDNARIAMAAAM 120 GGVSHFV+ AF P AG+L+GWFFL+SV +G PV AL GAGY AA+G G ++R+ +A + Sbjct: 73 GGVSHFVSKAFNPDAGSLIGWFFLLSVVVGAPVIALVGAGYACAAVGLGGSSRLVLAVFI 132 Query: 121 LGIGLVTNWIGMQXXXXXXXXXXXXXXXXXXXXXXXXLPRMESAHFTPFAPHGWMSVGQA 180 L ++TN+IGM+ + ++ F+PF P+GW SVG A Sbjct: 133 LLTAILTNYIGMKMTSQIQMAVVMTTIVILVCAFAGSVFTVDLNDFSPFMPYGWESVGHA 192 Query: 181 AAILFWCFIGWEAVSHLSEEFKDPQRAAVRGVTIAAIIVGVLYFLSALATVGTQSYLRGG 240 ++FW F+GWEAVSH+SEEF++P+R V+G IAA+++G+LY +A +GT SY G Sbjct: 193 GTLIFWSFLGWEAVSHISEEFENPERDVVKGTIIAALVIGILYIGTAFVVIGTHSYGPGI 252 Query: 241 ADSSLVWIISQPLGSWGGFIAGLTGLFICTATIIAYTGAASRVAFALSRQGYAPKWMGRL 300 +D SL+ +I G +G AGL LFIC A +IAY GAA R+A++LS GYAPK++ L Sbjct: 253 SDISLIQLIKVSFGQYGVVFAGLAALFICIAPVIAYIGAACRLAYSLSITGYAPKFLSCL 312 Query: 301 SSRYQTPTGAIGXXXXXXXXXXXXYGSGLLSITTLIQFPNATFILTYIGGCAAGIRLLKG 360 S R+ TP G + + SG LS++TLIQ PNATFILTY+GGCAAG+ LLK Sbjct: 313 SDRFHTPIGGLWFLGICFTIMLWIFSSGALSLSTLIQLPNATFILTYLGGCAAGVVLLKD 372 Query: 361 NRLGVVISWISFTATAAVFPFTGWAIGYPLVITALF-LLIMYTRTGRQNVRLEPVPGEP 418 + GV S IS TA VF F GW + YP++IT ++ +MY R + EP G P Sbjct: 373 RKFGVQFSVISLVMTAVVFLFVGWTVIYPVIITLVWGGFMMYRRRTDERGCEEPGSGYP 431 >Q2FQG6.1 Q2FQG6_METHJ Amino acid permease-associated region Length = 425 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 195/412 (47%), Positives = 268/412 (65%) Query: 1 MPQAIALYIGAVLGSGVLIVPGLAAEMAGPASLLAWGFMTLLILPLALSMGLLSARFPNA 60 + +ALY+G+VLG GVLI+PGL+AE+AGP SLL+W F+ +L P+AL+MG LSARFPN Sbjct: 12 LHHIVALYVGSVLGCGVLILPGLSAEIAGPGSLLSWIFIIVLAFPMALTMGFLSARFPND 71 Query: 61 GGVSHFVTLAFGPKAGALVGWFFLMSVPIGGPVAALTGAGYMTAAMGWGDNARIAMAAAM 120 GGVS+FVTLAF + GAL+GWFFL+S IG P+ ALTGAGY+ AA G + RI +A ++ Sbjct: 72 GGVSYFVTLAFNEQLGALIGWFFLVSGIIGVPILALTGAGYIAAAYGLSEVFRILIAVSI 131 Query: 121 LGIGLVTNWIGMQXXXXXXXXXXXXXXXXXXXXXXXXLPRMESAHFTPFAPHGWMSVGQA 180 + G+ N+IGM+ ++ +HFTP PHGWMS+G A Sbjct: 132 ILAGIFLNYIGMRVSSQVQIIVVLGTICILLGACIGSYRIVDPSHFTPLIPHGWMSIGYA 191 Query: 181 AAILFWCFIGWEAVSHLSEEFKDPQRAAVRGVTIAAIIVGVLYFLSALATVGTQSYLRGG 240 A +LFW +IGWEAV+H++EEF+DP+R VRG IA+II+G LY L+A VGT Y G Sbjct: 192 ATLLFWSYIGWEAVTHIAEEFEDPKRDVVRGTIIASIIIGSLYLLTAYVVVGTHMYGPGI 251 Query: 241 ADSSLVWIISQPLGSWGGFIAGLTGLFICTATIIAYTGAASRVAFALSRQGYAPKWMGRL 300 +D SLV++I + G G + G+TGLF+C A I+Y GAASR++++L+ GYAP ++ RL Sbjct: 252 SDVSLVYLIEKSFGQSGMILTGMTGLFVCLAPSISYIGAASRLSYSLAVTGYAPSFLARL 311 Query: 301 SSRYQTPTGAIGXXXXXXXXXXXXYGSGLLSITTLIQFPNATFILTYIGGCAAGIRLLKG 360 S RY T G + Y +GLLS+ LIQ PN+TFILTYIGGCAAG+ LLK Sbjct: 312 SERYYTHIGGLIFLAGCFSIVFIMYSTGLLSLAFLIQLPNSTFILTYIGGCAAGLVLLKD 371 Query: 361 NRLGVVISWISFTATAAVFPFTGWAIGYPLVITALFLLIMYTRTGRQNVRLE 412 +R + +S IS T+ + F WAI +P+ I ++ + + R + L+ Sbjct: 372 SRCALFMSGISLILTSCILLFISWAILFPIGIILIWGIFLMRRRKKMGNLLK 423 >C0ZGB7.1 C0ZGB7_BREBN Conserved hypothetical membrane protein Length = 420 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 191/403 (47%), Positives = 261/403 (64%), Gaps = 1/403 (0%) Query: 1 MPQAIALYIGAVLGSGVLIVPGLAAEMAGPASLLAWGFMTLLILPLALSMGLLSARFPNA 60 +PQ +ALYIGAV+GSGVL++PGLAAE AGPAS+LAW M++L+LP+A++MGLLSAR+P++ Sbjct: 17 LPQIVALYIGAVIGSGVLLIPGLAAEKAGPASILAWLVMSILVLPMAITMGLLSARYPSS 76 Query: 61 GGVSHFVTLAFGPKAGALVGWFFLMSVPIGGPVAALTGAGYMTAAMGWGDNARIAMAAAM 120 GGVS FV A+G + G +VGWFFL+SVPIG P+ ++TGA Y+ + W ++ A + Sbjct: 77 GGVSTFVRTAYGDRFGNMVGWFFLLSVPIGAPILSVTGANYIAILLNWSESQVYVAAGLL 136 Query: 121 LGIGLVTNWIGMQXXXXXXXXXXXXXXXXXXXXXXXXLPRMESAHFTPFAPHGWMSVGQA 180 L L+ N +G+ +P HFTPF P+GW+SV QA Sbjct: 137 LLAVLMMNVVGLHVAARVQTVVVSLIITILILAVVASIPHASVTHFTPFLPNGWLSVVQA 196 Query: 181 AAILFWCFIGWEAVSHLSEEFKDPQRAAVRGVTIAAIIVGVLYFLSALATVGTQSYLRGG 240 A ++FWCFIGWEAV+HLSEEF DP + A+RGV +A IV +LYF A TV T SY G Sbjct: 197 AGLMFWCFIGWEAVTHLSEEFVDPAKNAIRGVLWSAGIVALLYFAVAFMTVATHSYGGGI 256 Query: 241 ADSSLVWIISQPLGSWGGFIAGLTGLFICTATIIAYTGAASRVAFALSRQGYAPKWMGRL 300 + +SL ++ LG GG+I +T LFIC AT AY GAASR+A++L+++ AP+W G L Sbjct: 257 SAASLSVMVQLSLGPIGGWIVAVTALFICIATANAYIGAASRIAYSLAQEKIAPRWFGTL 316 Query: 301 SSRYQTPTGAIGXXXXXXXXXXXXYGSGLLSITTLIQFPNATFILTYIGGCAAGIRLLKG 360 ++Y+TPTG + ++ ++ LI+ PNATF TYIGGC AG+RLL Sbjct: 317 HAKYRTPTGGLLFLSLCFVVVLGVLYFDVIDLSRLIELPNATFFATYIGGCLAGVRLLHN 376 Query: 361 NRLGVVISWISFTATAAVFPFTGWAIGYPLVITALFLLIMYTR 403 +R+G + SW S T ++PF GW+ YPL+I AL L I R Sbjct: 377 SRVGRIASWTSLVCTVGLYPFLGWSALYPLLI-ALVLFICQKR 418 >Q2FNH7.1 Q2FNH7_METHJ Amino acid permease-associated region Length = 416 Score = 354 bits (909), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 188/402 (46%), Positives = 260/402 (64%) Query: 3 QAIALYIGAVLGSGVLIVPGLAAEMAGPASLLAWGFMTLLILPLALSMGLLSARFPNAGG 62 Q I LYIG+VLGSG+L++PGL A+ AGPAS+LAW M++L +P+ALSMG LS RFP+AGG Sbjct: 15 QIIPLYIGSVLGSGILLLPGLTADSAGPASILAWILMSILSIPMALSMGFLSVRFPHAGG 74 Query: 63 VSHFVTLAFGPKAGALVGWFFLMSVPIGGPVAALTGAGYMTAAMGWGDNARIAMAAAMLG 122 VS+FVT A+ G LVGWFFL+S + P+ ALTGAGY A G G+ R+ + ++ Sbjct: 75 VSYFVTRAWNADIGMLVGWFFLLSAIMAVPIIALTGAGYAATAFGLGETGRLIITGIIIF 134 Query: 123 IGLVTNWIGMQXXXXXXXXXXXXXXXXXXXXXXXXLPRMESAHFTPFAPHGWMSVGQAAA 182 I + TN+ GM+ + +E ++F PF PHGW SVG AA Sbjct: 135 IAVGTNFFGMRLTGGVQMAVVAATIAILIGAVVGSIHAIEPSNFVPFMPHGWPSVGHAAT 194 Query: 183 ILFWCFIGWEAVSHLSEEFKDPQRAAVRGVTIAAIIVGVLYFLSALATVGTQSYLRGGAD 242 ++FWCF+GWEA+SH++EEF+DP R VRG IA++I+ +LY +A A +GT+SY G ++ Sbjct: 195 LIFWCFLGWEAISHVTEEFEDPGRDVVRGTIIASVIISILYLATACAVIGTKSYGPGISE 254 Query: 243 SSLVWIISQPLGSWGGFIAGLTGLFICTATIIAYTGAASRVAFALSRQGYAPKWMGRLSS 302 SL+ +I G+ G IAG+ LFI TA IAYTGAA R+A+A+S+ GYAP+ L S Sbjct: 255 VSLIHLIHLSFGTSGVIIAGIITLFITTAPAIAYTGAAGRLAYAISKAGYAPRQFSLLHS 314 Query: 303 RYQTPTGAIGXXXXXXXXXXXXYGSGLLSITTLIQFPNATFILTYIGGCAAGIRLLKGNR 362 YQTP G + Y SG++++ LIQ PNATFILTY GCAAG+ L+K + Sbjct: 315 VYQTPVGGLAFLFCCFYLILGIYISGIITLDVLIQIPNATFILTYFAGCAAGLVLMKDSW 374 Query: 363 LGVVISWISFTATAAVFPFTGWAIGYPLVITALFLLIMYTRT 404 G+ +S +S T +F FTGWA+ +P ++ +F + + TRT Sbjct: 375 SGMGVSAVSLVLTGIIFCFTGWAMIWPAILIIIFAVYLKTRT 416 >Q394Z4.1 Q394Z4_BURS3 Putative amino acid transporter Length = 424 Score = 183 bits (464), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 143/387 (36%), Positives = 198/387 (51%) Query: 3 QAIALYIGAVLGSGVLIVPGLAAEMAGPASLLAWGFMTLLILPLALSMGLLSARFPNAGG 62 Q ALYIGAVLG+GV+ +P LAAE+AGPASLLAW + +L PLA + L AR+P+AGG Sbjct: 20 QGAALYIGAVLGTGVIALPALAAEVAGPASLLAWAALVVLSGPLAATFAALGARYPDAGG 79 Query: 63 VSHFVTLAFGPKAGALVGWFFLMSVPIGGPVAALTGAGYMTAAMGWGDNARIAMAAAMLG 122 VS + AFGPKA A+VGW F +VP G P AA+ G Y+ A G G I AAA++ Sbjct: 80 VSTYARRAFGPKAAAIVGWCFYFAVPAGAPAAAMFGGAYVAAVTGGGHTTIIVTAAALIA 139 Query: 123 IGLVTNWIGMQXXXXXXXXXXXXXXXXXXXXXXXXLPRMESAHFTPFAPHGWMSVGQAAA 182 N G+ P +A+ PFAPHGW++VGQAAA Sbjct: 140 TVSAANAFGVTVSGRMQLVLSALLVTLLLAAVLASAPHARTANLHPFAPHGWLAVGQAAA 199 Query: 183 ILFWCFIGWEAVSHLSEEFKDPQRAAVRGVTIAAIIVGVLYFLSALATVGTQSYLRGGAD 242 +L W F GWEA++HL+ EF+ P R IA ++VG LY A A+V GG+ Sbjct: 200 LLVWSFAGWEAITHLAAEFRRPAHDMPRSAGIAVVVVGFLYLSVAAASVTVLGPTAGGSG 259 Query: 243 SSLVWIISQPLGSWGGFIAGLTGLFICTATIIAYTGAASRVAFALSRQGYAPKWMGRLSS 302 + L +I+ +G +A + L + T+ AY A+++ AL R G P W+ + S Sbjct: 260 APLAELIAGGIGGHAQVLAAVAALLLTLGTMNAYFAGAAKLGAALGRDGALPAWLAQGSQ 319 Query: 303 RYQTPTGAIGXXXXXXXXXXXXYGSGLLSITTLIQFPNATFILTYIGGCAAGIRLLKGNR 362 P ++G + L+ + F++ Y G AA ++LL Sbjct: 320 VGGVPRRSLGVIALLAVVALAATTLSDVGPKPLVLVTSGCFVMVYGLGAAAALKLLPRGG 379 Query: 363 LGVVISWISFTATAAVFPFTGWAIGYP 389 + +WIS A A +F TGW I P Sbjct: 380 IAYRCAWISLVAVAGLFLTTGWYILCP 406 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.326 0.140 0.442 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,352,010,562 Number of extensions: 93119353 Number of successful extensions: 417398 Number of sequences better than 1.0e-05: 2320 Number of HSP's gapped: 418490 Number of HSP's successfully gapped: 2554 Length of query: 426 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 288 Effective length of database: 1,760,596,133 Effective search space: 507051686304 Effective search space used: 507051686304 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 133 (55.8 bits)