BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0522.0001.p
         (124 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A9VRB6.1 A9VRB6_BACWK UDP-glucose 6-dehydrogenase EC=1.1.1.22         142   1e-32
B8D170.1 B8D170_HALOH UDP-glucose 6-dehydrogenase EC=1.1.1.22         125   2e-27
A3DF55.1 A3DF55_CLOTH UDP-glucose 6-dehydrogenase EC=1.1.1.22         123   7e-27
B4BH32.1 B4BH32_CLOTM Nucleotide sugar dehydrogenase EC=1.1.1.22      117   3e-25
C4C280.1 C4C280_9FUSO Nucleotide sugar dehydrogenase                  107   4e-22

>A9VRB6.1 A9VRB6_BACWK UDP-glucose 6-dehydrogenase EC=1.1.1.22
          Length = 440

 Score =  142 bits (357), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/80 (82%), Positives = 75/80 (93%)

Query: 36  KAMIQETLISRGLEYAFDVVSNPEFLREGSAVQDFTHPDRVVIGAESDRAFEVMKEVYRV 95
           K+ +QETL  RG++Y FDVVSNPEFLREGSAV+DFTHPDRVVIGAES+RA E+MK+VYRV
Sbjct: 132 KSTVQETLDKRGIQYDFDVVSNPEFLREGSAVRDFTHPDRVVIGAESERALELMKDVYRV 191

Query: 96  LYINETPFVETNIETAEMIK 115
           LY+NETPFVETNIETAEMIK
Sbjct: 192 LYLNETPFVETNIETAEMIK 211


>B8D170.1 B8D170_HALOH UDP-glucose 6-dehydrogenase EC=1.1.1.22
          Length = 460

 Score =  125 bits (313), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/79 (73%), Positives = 69/79 (87%)

Query: 37  AMIQETLISRGLEYAFDVVSNPEFLREGSAVQDFTHPDRVVIGAESDRAFEVMKEVYRVL 96
           A+IQE L  RG++Y FDVVSNPEFLREG AV DFTHPDRVVIG ES++A +++KEVYR L
Sbjct: 135 AVIQEELDKRGVDYKFDVVSNPEFLREGKAVYDFTHPDRVVIGTESEKARDILKEVYRAL 194

Query: 97  YINETPFVETNIETAEMIK 115
           Y+N+TPFV TN+ETAEMIK
Sbjct: 195 YLNDTPFVFTNLETAEMIK 213


>A3DF55.1 A3DF55_CLOTH UDP-glucose 6-dehydrogenase EC=1.1.1.22
          Length = 443

 Score =  123 bits (308), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 59/80 (73%), Positives = 67/80 (83%)

Query: 36  KAMIQETLISRGLEYAFDVVSNPEFLREGSAVQDFTHPDRVVIGAESDRAFEVMKEVYRV 95
           K +I + L  RG+EY+FDVVSNPEFLREG A+ DFTHPDRVVIG ES+   E+MK+VYR 
Sbjct: 135 KKIIADKLKERGVEYSFDVVSNPEFLREGKALYDFTHPDRVVIGVESEEVAEIMKKVYRP 194

Query: 96  LYINETPFVETNIETAEMIK 115
           LYINETPFV TNIETAEMIK
Sbjct: 195 LYINETPFVITNIETAEMIK 214


>B4BH32.1 B4BH32_CLOTM Nucleotide sugar dehydrogenase EC=1.1.1.22
          Length = 445

 Score =  117 bits (294), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 55/80 (68%), Positives = 65/80 (81%)

Query: 36  KAMIQETLISRGLEYAFDVVSNPEFLREGSAVQDFTHPDRVVIGAESDRAFEVMKEVYRV 95
           K +I + +  RG EY FD+VSNPEFLREG A+ DFTHPDRVVIG ES  A ++MK+VYR 
Sbjct: 137 KKIISDKVKERGAEYRFDIVSNPEFLREGKALYDFTHPDRVVIGVESKEAAKIMKKVYRP 196

Query: 96  LYINETPFVETNIETAEMIK 115
           LY+NETPF+ TNIETAEMIK
Sbjct: 197 LYLNETPFIITNIETAEMIK 216


>C4C280.1 C4C280_9FUSO Nucleotide sugar dehydrogenase
          Length = 440

 Score =  107 bits (267), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 54/77 (70%), Positives = 59/77 (76%)

Query: 39  IQETLISRGLEYAFDVVSNPEFLREGSAVQDFTHPDRVVIGAESDRAFEVMKEVYRVLYI 98
           IQ  L  R  +  FDVVSNPEFLREG AV D   PDRV+IG ES +A E+MK+VY VLYI
Sbjct: 134 IQNKLNQREKKLDFDVVSNPEFLREGKAVNDCLRPDRVIIGTESKKAEEMMKKVYNVLYI 193

Query: 99  NETPFVETNIETAEMIK 115
           NETPFV TNIETAEMIK
Sbjct: 194 NETPFVFTNIETAEMIK 210


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.322    0.137    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 469,288,478
Number of extensions: 22553617
Number of successful extensions: 33371
Number of sequences better than 1.0e-05: 1052
Number of HSP's gapped: 33201
Number of HSP's successfully gapped: 1052
Length of query: 124
Length of database: 3,060,696,203
Length adjustment: 90
Effective length of query: 34
Effective length of database: 2,212,804,853
Effective search space: 75235365002
Effective search space used: 75235365002
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 125 (52.8 bits)