BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0521.0001.p (332 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C2W921.1 C2W921_BACCE Putative uncharacterized protein 413 e-113 C0Z5V1.1 C0Z5V1_BREBN Putative uncharacterized protein 410 e-113 Q9KEX3.1 Q9KEX3_BACHD BH0726 protein 405 e-111 A3I643.1 A3I643_9BACI Putative uncharacterized protein 402 e-110 B1HYP0.1 B1HYP0_LYSSC Putative uncharacterized protein 402 e-110 >C2W921.1 C2W921_BACCE Putative uncharacterized protein Length = 343 Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust. Identities = 191/340 (56%), Positives = 247/340 (72%), Gaps = 21/340 (6%) Query: 14 LKMITYPVIKKGAAIGVTAASAGVGPQSVELFGQAITRMEEKGYHVLCGDTVFRHDKAKS 73 + MI YP ++KGA IGVTA S+GV + +F QA ME KGY V+CGDTV+ +KAKS Sbjct: 4 IDMIKYPFLEKGATIGVTAPSSGVNVELHSMFKQACESMERKGYKVVCGDTVWTQEKAKS 63 Query: 74 ASGLVRGKEFNQMMSSDEVDLILPPWGGELLIEMLEHIDFSQVKNKWIMGFSDISLLLLV 133 +S R E +MM + +D+I+PPWGGELLIEML+ IDF ++ KWI+G+SD+S+LLL Sbjct: 64 SSAKKRANELIEMMQDENIDIIIPPWGGELLIEMLDKIDFDKINQKWILGYSDVSVLLLA 123 Query: 134 ITLRTGIATAHGPSLGDLRGEVIDKTTAKWETVLSTASGESVIQRSSP------------ 181 ITL+TGIATAHG +L DLRGE D+TTA W++VLST +G ++ Q SS Sbjct: 124 ITLKTGIATAHGTNLVDLRGEYSDETTAMWQSVLSTEAGTAITQYSSEKYQMKWQHNNPS 183 Query: 182 ---------TDWKTVSGEAVTLQGRLLGGCIDVIRHIIGTPYGDVRHFQENFIHQEPILW 232 T+WKTV+ + + ++GRLLGGCIDVIRH+IGTP+G V F+E EP++W Sbjct: 184 PCVFHLTENTNWKTVATDKIKMKGRLLGGCIDVIRHLIGTPFGKVEDFREKHFDHEPLIW 243 Query: 233 YLENCELNTADLRRSLVQMKLAGWFDNCSGVMFGRSGSNTPMENYTAEDVYRELTEELQV 292 Y ENCEL T DLRRSLVQMK AGWFDNCSG++FGRS +N +E YTAEDVY EL +ELQ+ Sbjct: 244 YFENCELTTTDLRRSLVQMKQAGWFDNCSGILFGRSAANYTVEGYTAEDVYEELADELQI 303 Query: 293 PVVYDLDYGHIPPQMTLINGAYAEVKVSGGAGTITQYFYE 332 P+VYD+D GH+PPQ+T INGA+AE++V G G I Q+F + Sbjct: 304 PIVYDIDCGHVPPQITFINGAFAEIEVGDGKGVIIQHFQQ 343 >C0Z5V1.1 C0Z5V1_BREBN Putative uncharacterized protein Length = 339 Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust. Identities = 198/337 (58%), Positives = 252/337 (74%), Gaps = 22/337 (6%) Query: 16 MITYPVIKKGAAIGVTAASAGVGPQSVELFGQAITRMEEKGYHVLCGDTVFRHDKAKSAS 75 MITYP +KKGA IGVTA S+GV EL A +RME +GY ++C DTV+ +KAKSA Sbjct: 1 MITYPSLKKGATIGVTAPSSGVPEYLHELIRLACSRMESRGYSIVCKDTVWTQEKAKSAP 60 Query: 76 GLVRGKEFNQMMSSDEVDLILPPWGGELLIEMLEHIDFSQVKNKWIMGFSDISLLLLVIT 135 + R EFN +M ++VD+I+PPWGGELLIE+L+ +DF ++ KW++G+SD+S+LLL IT Sbjct: 61 AINRAAEFNSLMQEEDVDIIIPPWGGELLIEILDKLDFDAMQPKWVLGYSDVSVLLLAIT 120 Query: 136 LRTGIATAHGPSLGDLRGEVIDKTTAKWETVLSTASGESVIQRSSP-------------- 181 L+TG+ATAHG +L DLRG +D+TTA WETVLST GESV+Q SSP Sbjct: 121 LKTGMATAHGTNLIDLRGADMDETTAMWETVLSTQKGESVLQYSSPMYQKEWQHTNPSPH 180 Query: 182 -------TDWKTV-SGEAVTLQGRLLGGCIDVIRHIIGTPYGDVRHFQENFIHQEPILWY 233 T WKT + V +QGRLLGGCID+IRH+IGTPYGDV+ FQ+ I E I+WY Sbjct: 181 IFHLTEPTVWKTTETTPHVNMQGRLLGGCIDIIRHVIGTPYGDVQTFQKEQIGNEAIIWY 240 Query: 234 LENCELNTADLRRSLVQMKLAGWFDNCSGVMFGRSGSNTPMENYTAEDVYRELTEELQVP 293 LENCEL+T DLRRSLVQMKLAGWFD+C+G+MFGRS +N ++ YT EDVY+EL EELQVP Sbjct: 241 LENCELSTTDLRRSLVQMKLAGWFDHCAGIMFGRSPANQTVDGYTVEDVYQELAEELQVP 300 Query: 294 VVYDLDYGHIPPQMTLINGAYAEVKVSGGAGTITQYF 330 V+YD+D GH+PPQ+T INGA+AEV++S G++ QYF Sbjct: 301 VLYDIDCGHMPPQITFINGAFAEVELSFEKGSVRQYF 337 >Q9KEX3.1 Q9KEX3_BACHD BH0726 protein Length = 338 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 192/338 (56%), Positives = 246/338 (72%), Gaps = 21/338 (6%) Query: 16 MITYPVIKKGAAIGVTAASAGVGPQSVELFGQAITRMEEKGYHVLCGDTVFRHDKAKSAS 75 MI YPV+K+GA IGVTA S+GV +L A RMEE+G+ V+CG+TV+ +KAKS+ Sbjct: 1 MIRYPVLKEGATIGVTAPSSGVPKDLHDLVKAACERMEERGFRVVCGETVWTQEKAKSSE 60 Query: 76 GLVRGKEFNQMMSSDEVDLILPPWGGELLIEMLEHIDFSQVKNKWIMGFSDISLLLLVIT 135 R E MM D +DL++PPWGG+LLIE+L+ +DF Q + KWI+G+SD SLLLL IT Sbjct: 61 AKKRATELQAMMEDDAIDLMIPPWGGQLLIEVLQFLDFEQWEPKWILGYSDTSLLLLAIT 120 Query: 136 LRTGIATAHGPSLGDLRGEVIDKTTAKWETVLSTASGESVIQRSSP-------------- 181 L TGIATAHG +L DLRGE D TTA W+ VLST G+S++Q SS Sbjct: 121 LNTGIATAHGTNLVDLRGEYSDDTTAMWQPVLSTKIGDSIVQHSSKKYQKEWDFERPTPC 180 Query: 182 -------TDWKTVSGEAVTLQGRLLGGCIDVIRHIIGTPYGDVRHFQENFIHQEPILWYL 234 T W+ V + +++ GRLLGGCIDVIRH+IGTPYGDV FQ + I PI+W+ Sbjct: 181 VFHLTEKTKWQGVPKQTLSINGRLLGGCIDVIRHLIGTPYGDVTRFQADVIKGAPIIWFF 240 Query: 235 ENCELNTADLRRSLVQMKLAGWFDNCSGVMFGRSGSNTPMENYTAEDVYRELTEELQVPV 294 ENCEL T DLRR+LVQMKLAGWFD+CSG+MFGRS +NTP+E+YT +DV+R+L EEL+VP+ Sbjct: 241 ENCELTTTDLRRTLVQMKLAGWFDHCSGIMFGRSPTNTPVEDYTVDDVFRDLYEELKVPL 300 Query: 295 VYDLDYGHIPPQMTLINGAYAEVKVSGGAGTITQYFYE 332 + D+D GH+PPQ+TLINGAYAEVK++ G G +TQ+F E Sbjct: 301 MTDIDCGHVPPQLTLINGAYAEVKLNDGKGIVTQFFKE 338 >A3I643.1 A3I643_9BACI Putative uncharacterized protein Length = 340 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 195/338 (57%), Positives = 253/338 (74%), Gaps = 21/338 (6%) Query: 14 LKMITYPVIKKGAAIGVTAASAGVGPQSVELFGQAITRMEEKGYHVLCGDTVFRHDKAKS 73 + +I YP +KK IGVTA S+GV + +L A TRME KG+ V+CG+T + DKAKS Sbjct: 2 IHLINYPFLKKDMTIGVTAPSSGVPAELHDLLKTACTRMENKGFRVICGETAWTQDKAKS 61 Query: 74 ASGLVRGKEFNQMMSSDEVDLILPPWGGELLIEMLEHIDFSQVKNKWIMGFSDISLLLLV 133 A + R +EF+ MM++D++D+I+PPWGGELLIE+LE+IDFS ++ KW++G+SD+SLLLL Sbjct: 62 APAIKRAEEFHHMMANDDIDIIIPPWGGELLIEILEYIDFSNIQPKWVLGYSDVSLLLLA 121 Query: 134 ITLRTGIATAHGPSLGDLRGEVIDKTTAKWETVLSTASGESVIQRSS------------- 180 ITL TGIATAHG +L DLRGE D TTA W+TVLS GES++Q SS Sbjct: 122 ITLTTGIATAHGTNLVDLRGEYSDDTTAMWQTVLSLKKGESIVQHSSDHYQKEWQFDSPS 181 Query: 181 --------PTDWKTVSGEAVTLQGRLLGGCIDVIRHIIGTPYGDVRHFQENFIHQEPILW 232 T W++ S E + +QGRLLGGCID IRH+IGT +GDV+ FQE IH E I+W Sbjct: 182 PYVFNFTEKTKWQSTSLERLKIQGRLLGGCIDTIRHLIGTKFGDVQSFQETHIHGESIIW 241 Query: 233 YLENCELNTADLRRSLVQMKLAGWFDNCSGVMFGRSGSNTPMENYTAEDVYRELTEELQV 292 YLENCEL+T DLRR+LVQMKLAGWF+NCSG++FGRS +NT + NYT EDVY+EL+EELQ+ Sbjct: 242 YLENCELSTTDLRRTLVQMKLAGWFNNCSGILFGRSTANTSVGNYTIEDVYQELSEELQI 301 Query: 293 PVVYDLDYGHIPPQMTLINGAYAEVKVSGGAGTITQYF 330 P++YD+D GH+PPQ+T INGAYA+++ G GTI Q+F Sbjct: 302 PIIYDIDCGHVPPQITFINGAYAKLESYNGKGTIVQHF 339 >B1HYP0.1 B1HYP0_LYSSC Putative uncharacterized protein Length = 345 Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust. Identities = 198/336 (58%), Positives = 248/336 (73%), Gaps = 21/336 (6%) Query: 16 MITYPVIKKGAAIGVTAASAGVGPQSVELFGQAITRMEEKGYHVLCGDTVFRHDKAKSAS 75 M+ YP++K+G IGVTA S+GV + +L A RME KGY V+CG+T + DKAKSA Sbjct: 9 MMKYPLLKEGITIGVTAPSSGVPVELHDLLKTACMRMENKGYKVVCGETAWTQDKAKSAP 68 Query: 76 GLVRGKEFNQMMSSDEVDLILPPWGGELLIEMLEHIDFSQVKNKWIMGFSDISLLLLVIT 135 + R +EFN MMS+DE+D+I+PPWGGELLIEMLE+IDFS ++ KWI+G+SD+SLLLL +T Sbjct: 69 AIKRAEEFNNMMSNDEIDIIIPPWGGELLIEMLEYIDFSNIQTKWILGYSDVSLLLLAMT 128 Query: 136 LRTGIATAHGPSLGDLRGEVIDKTTAKWETVLSTASGESVIQRSS--------------- 180 L TGIATAHG +L DLRGE D TTA W++VLS GES++Q SS Sbjct: 129 LTTGIATAHGTNLVDLRGEYSDDTTAMWQSVLSLKKGESILQHSSNQYQKEWQFDNPTPY 188 Query: 181 ------PTDWKTVSGEAVTLQGRLLGGCIDVIRHIIGTPYGDVRHFQENFIHQEPILWYL 234 T W+T S V +QGRLLGGCID IRH+IGT +G+V+ FQE I E I+W+ Sbjct: 189 VFNFTEKTRWQTTSDHRVNIQGRLLGGCIDTIRHLIGTKFGNVQSFQETHIQGESIVWFF 248 Query: 235 ENCELNTADLRRSLVQMKLAGWFDNCSGVMFGRSGSNTPMENYTAEDVYRELTEELQVPV 294 ENCEL T DLRRSLVQMKLAGWF NCSG+MFGRS +NT + NYT EDVY+EL++ELQ+P+ Sbjct: 249 ENCELFTTDLRRSLVQMKLAGWFTNCSGMMFGRSAANTSVGNYTIEDVYQELSKELQIPI 308 Query: 295 VYDLDYGHIPPQMTLINGAYAEVKVSGGAGTITQYF 330 +YD+D GH+PPQ+TLINGAYAE+ G GTI Q+F Sbjct: 309 IYDMDCGHVPPQITLINGAYAEIDSYNGKGTIYQHF 344 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,017,218,188 Number of extensions: 82114233 Number of successful extensions: 225781 Number of sequences better than 1.0e-05: 737 Number of HSP's gapped: 224718 Number of HSP's successfully gapped: 743 Length of query: 332 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 196 Effective length of database: 1,779,438,163 Effective search space: 348769879948 Effective search space used: 348769879948 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)