BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0520.0055.p (152 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A4IU28.1 A4IU28_GEOTN Alkane monoxygenase 147 3e-34 A8DC15.1 A8DC15_BACST Alkane monooxygenase 146 5e-34 Q8PP33.1 Q8PP33_XANAC Monooxygenase 144 3e-33 Q4ZSG7.1 Q4ZSG7_PSEU2 Xenobiotic compound monooxygenase, DszA fa... 141 2e-32 Q881B2.1 Q881B2_PSESM Xenobiotic compound monooxygenase, DszA fa... 141 2e-32 >A4IU28.1 A4IU28_GEOTN Alkane monoxygenase Length = 440 Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 93/134 (69%), Gaps = 3/134 (2%) Query: 2 KQIHLGVFEVNSINHLTQGIWAHPEQNRVHYRKIGYWTRIAKILERGKFDFMFFADT--- 58 K+IH+ FE+N + H+ G+W HPE R Y + YWT +A++LE+GKFD +F AD Sbjct: 3 KKIHINAFEMNCVGHIAHGLWRHPENQRHRYTDLNYWTELAQLLEKGKFDALFLADVVGI 62 Query: 59 YGYPKERTELAFREATGLPGNDPMLLIPALSMVTEHLAFTMTTSTSYEAPFANARRFSSL 118 Y ++ + A REA +P NDP++LI A++ VT+HLAF +T ST+YE P+ +ARR S+L Sbjct: 63 YDVYRQSRDTAVREAVQIPVNDPLMLISAMAYVTKHLAFAVTFSTTYEHPYGHARRMSTL 122 Query: 119 DHVTDGRIGWDVGT 132 DH+T GRI W+V T Sbjct: 123 DHLTKGRIAWNVVT 136 >A8DC15.1 A8DC15_BACST Alkane monooxygenase Length = 440 Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 92/134 (68%), Gaps = 3/134 (2%) Query: 2 KQIHLGVFEVNSINHLTQGIWAHPEQNRVHYRKIGYWTRIAKILERGKFDFMFFADT--- 58 K+IH+ FE N + H+ G+W HPE R Y + YWT +A++LE+GKFD +F AD Sbjct: 3 KEIHINAFEKNCVGHIAHGLWRHPENQRHRYTDLNYWTELAQLLEKGKFDALFLADVVGI 62 Query: 59 YGYPKERTELAFREATGLPGNDPMLLIPALSMVTEHLAFTMTTSTSYEAPFANARRFSSL 118 Y ++ + A REA +P NDP++LI A++ VT+HLAF +T ST+YE P+ +ARR S+L Sbjct: 63 YDVYRQSRDTAVREAVQIPVNDPLMLISAMAYVTKHLAFAVTFSTTYEHPYGHARRMSTL 122 Query: 119 DHVTDGRIGWDVGT 132 DH+T GRI W+V T Sbjct: 123 DHLTKGRIAWNVVT 136 >Q8PP33.1 Q8PP33_XANAC Monooxygenase Length = 486 Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 91/134 (67%), Gaps = 3/134 (2%) Query: 2 KQIHLGVFEVNSINHLTQGIWAHPEQNRVHYRKIGYWTRIAKILERGKFDFMFFADTYGY 61 KQ+H+ +FE+N ++H+ G+WAHP+ NR + + YWT +A++LE G FD +F AD G Sbjct: 8 KQLHVNLFEMNCVSHIVHGMWAHPDNNRHRFNDLEYWTELAQLLEYGTFDGIFLADVIGA 67 Query: 62 PKE---RTELAFREATGLPGNDPMLLIPALSMVTEHLAFTMTTSTSYEAPFANARRFSSL 118 + A EA +P NDP+LLIPA++ VT HL F T ST+YE PFA ARR S+L Sbjct: 68 YDSFGHGAKAALEEAVQIPSNDPLLLIPAMAQVTRHLGFGATFSTTYEPPFAFARRMSTL 127 Query: 119 DHVTDGRIGWDVGT 132 DH+T GR+GW++ T Sbjct: 128 DHLTRGRVGWNIVT 141 >Q4ZSG7.1 Q4ZSG7_PSEU2 Xenobiotic compound monooxygenase, DszA family Length = 466 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 89/134 (66%), Gaps = 3/134 (2%) Query: 2 KQIHLGVFEVNSINHLTQGIWAHPEQNRVHYRKIGYWTRIAKILERGKFDFMFFADT--- 58 +QI L F++N + H + G+WAHP Y+ + YWT +AKILERGKFD +F AD Sbjct: 3 RQIRLNAFDMNCVGHQSPGLWAHPRDRSWQYKDLEYWTDLAKILERGKFDGLFIADVLGI 62 Query: 59 YGYPKERTELAFREATGLPGNDPMLLIPALSMVTEHLAFTMTTSTSYEAPFANARRFSSL 118 Y + E A R+AT +P NDP+ LIP +++VTEHL F +T S S+E P+ ARR S+L Sbjct: 63 YDVYRGNGEAAIRQATQVPVNDPLQLIPPMALVTEHLGFGLTASLSFEHPYPFARRLSTL 122 Query: 119 DHVTDGRIGWDVGT 132 DH+T GR GW++ T Sbjct: 123 DHLTKGRAGWNIVT 136 >Q881B2.1 Q881B2_PSESM Xenobiotic compound monooxygenase, DszA family Length = 466 Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 65/134 (48%), Positives = 89/134 (66%), Gaps = 3/134 (2%) Query: 2 KQIHLGVFEVNSINHLTQGIWAHPEQNRVHYRKIGYWTRIAKILERGKFDFMFFADT--- 58 +QI L F++N + H + G+WAHP Y+ + YWT +AKILERGKFD +F AD Sbjct: 3 RQIRLNAFDMNCVGHQSPGLWAHPRDRSWQYKDLEYWTDLAKILERGKFDGLFIADVLGI 62 Query: 59 YGYPKERTELAFREATGLPGNDPMLLIPALSMVTEHLAFTMTTSTSYEAPFANARRFSSL 118 Y + E A R+AT +P NDP+ LIP +++VTEHL F +T S S+E P+ ARR S+L Sbjct: 63 YDVYRGNGEAAIRQATQVPVNDPLQLIPPMALVTEHLGFGLTASLSFEHPYPFARRLSTL 122 Query: 119 DHVTDGRIGWDVGT 132 DH+T GR GW++ T Sbjct: 123 DHLTKGRAGWNIVT 136 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.137 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 884,769,357 Number of extensions: 34417544 Number of successful extensions: 56732 Number of sequences better than 1.0e-05: 876 Number of HSP's gapped: 56043 Number of HSP's successfully gapped: 877 Length of query: 152 Length of database: 3,060,696,203 Length adjustment: 114 Effective length of query: 38 Effective length of database: 1,986,700,493 Effective search space: 75494618734 Effective search space used: 75494618734 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 125 (52.8 bits)