BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0520.0049.p (527 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K3R0.1 B3K3R0_9BACI Extracellular solute-binding protein family 5 370 e-100 A4IPU7.1 A4IPU7_GEOTN ABC transporter peptide-binding protein 361 1e-97 B6FU32.1 B6FU32_9CLOT Putative uncharacterized protein 358 7e-97 B4BNQ0.1 B4BNQ0_9BACI Extracellular solute-binding protein family 5 358 8e-97 C1P9U9.1 C1P9U9_BACCO Extracellular solute-binding protein family 5 350 2e-94 >B3K3R0.1 B3K3R0_9BACI Extracellular solute-binding protein family 5 Length = 532 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 200/484 (41%), Positives = 287/484 (59%), Gaps = 5/484 (1%) Query: 47 ELHFPLAQQVPTLDPHLSLN-TNVYIGLNIFEGLFAFDANFQPVPMLAESYELSDDAKTY 105 EL+ L Q PTLD L+++ + NIFE L+ +AN++PVP LAES E S+D TY Sbjct: 51 ELNIALTAQPPTLDTALTVSAVALDTAGNIFEQLYTLNANYEPVPALAESVERSEDGLTY 110 Query: 106 TFHLRHGVQFHNGKEMKAEDVTASLNRWKSITGRAQASLGESEFTIKDDYTVELKLDHPR 165 TF LR GV+FHNGKEM +EDV AS+NRW + RA+ L ++F D YTV+L ++ P Sbjct: 111 TFALRQGVKFHNGKEMTSEDVVASMNRWLVTSSRAKVLLTNAKFEAVDTYTVKLTVESPT 170 Query: 166 NDILAQLSHVLNNAAIMPKEIVEAAGPDGVSEYIGTGPFKFVEWKQDQYVHVAKFDDYQS 225 +D+L ++ +IMPKEIV+AA DG+ EYIGTGP+KF EWKQDQY+H+ + DDYQ Sbjct: 171 SDVLILIASQAQFPSIMPKEIVDAAPADGIKEYIGTGPYKFQEWKQDQYIHLVRNDDYQQ 230 Query: 226 VETAA-SGLSGKKEALLQDVYFDIVPDSATRFSSFLAGTYDYVD-VSLDNLPQVEGSPDV 283 V A SG G+KEA +D+YF V D +TR + G YD D + +++ ++ ++ Sbjct: 231 VSDAEPSGFDGRKEAPAKDLYFHFVTDHSTRIAGVKTGQYDVADSIPIESYDELAADNNI 290 Query: 284 KVNKVLGSDINLVFNKKSPLFSNLKNREAVAAVIDADEILLGTVNSPDLYRLNSSYMYPE 343 + G + FN L +K R+A+ A + +EI+L + PDLY L Y+ Sbjct: 291 NLLSFPGGALTAFFNTSEGLLKEVKIRQAILAAFNNEEIMLASFAKPDLYSLAPGYLNTN 350 Query: 344 NKTWYSEAGQENYNQKNPDKAKALLKESGYNGEEVVLLTTKELGGSFYNATIVVQKELES 403 W +EAG E YNQ NP+KAK LL+E+GYNGEE+ LLTTK+ Y AT+V+Q++L Sbjct: 351 QVQWSTEAGAEYYNQSNPEKAKQLLQEAGYNGEEITLLTTKDY-NEMYTATLVIQEQLRQ 409 Query: 404 IGVKTKLDINDFATLLQKRADPNAWDIYVGLFTMPSTPSQLLYLNPSYGFADDAKLAELT 463 IG+ K++ DF T L+ + D + WDI+V TP QLL +NP + D+ + + Sbjct: 410 IGMNVKVENFDFPTFLETKNDRSKWDIFVASTGYQLTPPQLLAVNPDWAGLDNETVKQAL 469 Query: 464 VKLTSAVSPEEIKAANDALQQYEWEYLAAVKIGDTYSQSATRDKLVGLTTLAGYPNLANT 523 + + A +PE K + LQ + +E+ ++ IG AT KL G P + N Sbjct: 470 IDIRGAATPEAAKQEWEKLQGFLYEFASSTVIGHYNGVVATTKKLEGFELFEA-PVVWNA 528 Query: 524 KLLK 527 K+ K Sbjct: 529 KVAK 532 >A4IPU7.1 A4IPU7_GEOTN ABC transporter peptide-binding protein Length = 529 Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 200/477 (41%), Positives = 283/477 (59%), Gaps = 9/477 (1%) Query: 55 QVPTLDPHLSLNTNVY-IGLNIFEGLFAFDANFQPVPMLAESYELSDDAKTYTFHLRHGV 113 Q TLDP ++ + ++E L D N+ P LAESY +SDD K YTF LR G+ Sbjct: 54 QPDTLDPTVTTSGATKDTARLMYESLLTLDENWTVAPQLAESYNVSDDGKVYTFKLRQGI 113 Query: 114 QFHNGKEMKAEDVTASLNRWKSITGRAQASLGESEFTIKDDYTVELKLDHPRNDILAQLS 173 +FHNGKEM A+DV AS+ RW + + ++ L +E+ DDYTVEL L + L+ Sbjct: 114 KFHNGKEMTADDVVASMERWTTNSSLTKSILEGAEWKKVDDYTVELHLTKSSALVPFALA 173 Query: 174 HVLNNAAIMPKEIVEAAGPDGVSEYIGTGPFKFVEWKQDQYVHVAKFDDYQSVETAASGL 233 AAIMPKE+ E AGP G +EY+GTGPFKFVEWK +QY+H KF+DYQ SGL Sbjct: 174 DQNQLAAIMPKEVAEKAGPTGATEYVGTGPFKFVEWKTNQYIHFTKFEDYQPRSEQTSGL 233 Query: 234 SGKKEALLQDVYFDIVPDSATRFSSFLAGTYDY-VDVSLDNLPQVEGSPDVKVNKVLGSD 292 +GKKEAL+ D+Y+ VPD +TR + ++G YD VS D + Q+E +P VN Sbjct: 234 AGKKEALVNDIYWHFVPDESTRNAGLISGQYDIATGVSYDTVEQLENTPGTGVNIHTYGI 293 Query: 293 INLVFNKKSPLFSNLKNREAVAAVIDADEILLGTVNSPDLYRLNSSYMYPENKTWYSEAG 352 LVFNKK LFS++K R+AV +D + +L + Y+L S PE WYS+AG Sbjct: 294 QMLVFNKKQGLFSDVKARQAVNYALDKELVLRSSFGDERFYKLEPSLFRPEQTDWYSDAG 353 Query: 353 QENYNQKNPDKAKALLKESGYNGEEVVLLTTKELGGSFYNATIVVQKELESIGVKTKLDI 412 ++ YN+K+ + AK LLKE+ YNGEE+V+LT+++ YNA + Q+ LE IG+K KL++ Sbjct: 354 KDVYNKKDLELAKKLLKEANYNGEEIVILTSRDYAYQ-YNAAVATQQLLEKIGIKAKLEV 412 Query: 413 NDFATLLQKRADPNAWDIYVGLFTMPSTPSQLLYLNPSY---GFADDAKLAELTVKLTSA 469 D+ TLL++R DP WDI+ + P Q +L+ G+ + ++ +L ++ +A Sbjct: 413 YDWGTLLERRGDPALWDIFFTGWDTSVIPHQYGFLDSKAQWPGWTNSPEIDKLLSEIQAA 472 Query: 470 VSPEEIKAANDALQQYEWEYLAAVKIGDTYSQ-SATRDKLVGLTTLAGYPNLANTKL 525 + +E K LQQ WEYL + IG TYS+ + DK+ G G P L N + Sbjct: 473 KTQDEAKELYSQLQQKMWEYLPIINIG-TYSKVTGVSDKVKGFRDFIG-PVLWNVSV 527 >B6FU32.1 B6FU32_9CLOT Putative uncharacterized protein Length = 522 Score = 358 bits (919), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 184/453 (40%), Positives = 291/453 (64%), Gaps = 5/453 (1%) Query: 47 ELHFPLAQQVPTLDPHLSLNTNVY--IGLNIFEGLFAFDANFQPVPMLAESYELSDDAKT 104 E+H ++ P+LDP S+N+N+ IG++++E LFA D N++P P+LAESYE+SDD T Sbjct: 42 EIHIAISANPPSLDPQ-SVNSNIVGGIGIHVYESLFAMDENYEPTPVLAESYEVSDDGMT 100 Query: 105 YTFHLRHGVQFHNGKEMKAEDVTASLNRWKSITGRAQASLGESEFTIKDDYTVELKLDHP 164 YT LR GV+FHNG+EM A+DV AS+NRW + +A +G S F DDYTV LK++ Sbjct: 101 YTIKLRQGVKFHNGEEMTADDVVASMNRWIETSPKANTLIGGSTFEKVDDYTVNLKVNQA 160 Query: 165 RNDILAQLSHVLNNAAIMPKEIVEAAGPDGVSEYIGTGPFKFVEWKQDQYVHVAKFDDYQ 224 +DI+ L+ + AAI P E+VE+AG DG+SEYIGTGP+K EWKQDQYV + K +DYQ Sbjct: 161 SSDIIMILASPIQFAAIYPAEVVESAGADGISEYIGTGPYKVSEWKQDQYVKLEKNEDYQ 220 Query: 225 SVETAASGLSGKKEALLQDVYFDIVPDSATRFSSFLAGTYDYV-DVSLDNLPQVEGSPDV 283 + A++G++G+K+A + +YFD+V D+ATR + G YD ++ DN ++ + Sbjct: 221 PSKDASTGIAGEKKAATETLYFDVVTDAATRIAGLQNGQYDIAEEIPADNYEELSKDESL 280 Query: 284 KVNKVLGSDINLVFNKKSPLFSNLKNREAVAAVIDADEILLGTVNSPDLYRLNSSYMYPE 343 K++ G +NL N + +++ R+A+ A ++ D+ILL + + DLY +N+ + P Sbjct: 281 KMSVERGGTLNLFLNTTEGIMADVNMRQAILAALNCDDILLASYGNKDLYEVNAGWCVPT 340 Query: 344 NKTWYSEAGQENYNQKNPDKAKALLKESGYNGEEVVLLTTKELGGSFYNATIVVQKELES 403 + W ++AG+E YNQ + +KAK LLK++GYN E++VL+TT + YNAT+VVQ++L+ Sbjct: 341 DTQWGTDAGKEYYNQNDVEKAKELLKKAGYNNEKIVLVTTPDY-AEMYNATLVVQEQLKK 399 Query: 404 IGVKTKLDINDFATLLQKRADPNAWDIYVGLFTMPSTPSQLLYLNPSYGFADDAKLAELT 463 G+ +++ DF+T ++ RADP + +++ + P QL L+ + D ++ + Sbjct: 400 AGINAEVESYDFSTFMEHRADPKQFSMFITSNSYNMLPIQLSVLDKGWAGLDRQEVTDGI 459 Query: 464 VKLTSAVSPEEIKAANDALQQYEWEYLAAVKIG 496 + SA + E+ AA LQ + +EY AA +G Sbjct: 460 AAIRSAATAEDASAAWADLQTFLYEYGAATVLG 492 >B4BNQ0.1 B4BNQ0_9BACI Extracellular solute-binding protein family 5 Length = 532 Score = 358 bits (919), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 199/477 (41%), Positives = 283/477 (59%), Gaps = 9/477 (1%) Query: 55 QVPTLDPHLSLNTNVY-IGLNIFEGLFAFDANFQPVPMLAESYELSDDAKTYTFHLRHGV 113 Q TLDP ++ + ++E L D N+ P LAESY +SDD K YTF LR G+ Sbjct: 57 QPDTLDPTVTTSGATKDTARLMYESLLTLDENWTVAPQLAESYNVSDDGKVYTFKLRQGI 116 Query: 114 QFHNGKEMKAEDVTASLNRWKSITGRAQASLGESEFTIKDDYTVELKLDHPRNDILAQLS 173 +FHNGKEM A+DV AS+ RW + + ++ L +E+ DDYTVEL L + L+ Sbjct: 117 KFHNGKEMTADDVVASMERWTTNSSLTKSILEGAEWKKVDDYTVELHLTKSSALVPFALA 176 Query: 174 HVLNNAAIMPKEIVEAAGPDGVSEYIGTGPFKFVEWKQDQYVHVAKFDDYQSVETAASGL 233 AAIMPKE+ E AGP G +EY+GTGPFKFVEWK +QY++ KF+DYQ SGL Sbjct: 177 DQNQLAAIMPKEVAEKAGPTGATEYVGTGPFKFVEWKTNQYIYFTKFEDYQPRSEQTSGL 236 Query: 234 SGKKEALLQDVYFDIVPDSATRFSSFLAGTYDY-VDVSLDNLPQVEGSPDVKVNKVLGSD 292 +GKKEAL+ D+Y+ VPD +TR + ++G YD VS D + Q+E +P VN Sbjct: 237 AGKKEALVNDIYWHFVPDESTRNAGLISGQYDIATGVSYDTVEQLENTPGTGVNIHTYGI 296 Query: 293 INLVFNKKSPLFSNLKNREAVAAVIDADEILLGTVNSPDLYRLNSSYMYPENKTWYSEAG 352 LVFNKK LFS++K R+AV +D + +L + Y+L S PE WYS+AG Sbjct: 297 QMLVFNKKQGLFSDVKARQAVNYALDKELVLRSSFGDERFYKLEPSLFRPEQTDWYSDAG 356 Query: 353 QENYNQKNPDKAKALLKESGYNGEEVVLLTTKELGGSFYNATIVVQKELESIGVKTKLDI 412 ++ YN+K+ + AK LLKE+ YNGEE+V+LT+++ YNA + Q+ LE IG+K KL++ Sbjct: 357 KDVYNKKDLELAKKLLKEANYNGEEIVILTSRDYAYQ-YNAAVATQQLLEKIGIKAKLEV 415 Query: 413 NDFATLLQKRADPNAWDIYVGLFTMPSTPSQLLYLNPSY---GFADDAKLAELTVKLTSA 469 D+ TLL++R DP WDI+ + P Q +L+ G+ + ++ +L ++ +A Sbjct: 416 YDWGTLLERRGDPALWDIFFTGWDTSVIPHQYGFLDSKAQWPGWTNSPEIDKLLSEIQAA 475 Query: 470 VSPEEIKAANDALQQYEWEYLAAVKIGDTYSQ-SATRDKLVGLTTLAGYPNLANTKL 525 + +E K LQQ WEYL + IG TYS+ + DK+ G G P L N + Sbjct: 476 KTQDEAKELYSQLQQKMWEYLPIINIG-TYSKVTGVSDKVKGFRDFIG-PVLWNVSV 530 >C1P9U9.1 C1P9U9_BACCO Extracellular solute-binding protein family 5 Length = 483 Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 198/480 (41%), Positives = 283/480 (58%), Gaps = 10/480 (2%) Query: 53 AQQVP-TLDPHLSL-NTNVYIGLNIFEGLFAFDANFQPVPMLAESYELSDDAKTYTFHLR 110 AQ P TLDP ++ +FE L D N++ P LAESY+ S D KT TF LR Sbjct: 5 AQAQPDTLDPTVTTAEATAQPARLVFESLVTLDKNYKVAPQLAESYKTSSDGKTVTFKLR 64 Query: 111 HGVQFHNGKEMKAEDVTASLNRWKSITGRAQASLGESEFTIKDDYTVELKLDHPRNDILA 170 GV+FHNGKEMKA+DV AS+ +W+ ++ + +++ KDDYTVEL L P + + Sbjct: 65 KGVKFHNGKEMKADDVIASMQKWEKNASLTKSIMDGAKWEKKDDYTVELVLKKPSSVAMT 124 Query: 171 QLSHVLNNAAIMPKEIVEAAGPDGVSEYIGTGPFKFVEWKQDQYVHVAKFDDYQSVETAA 230 L+ AA+MPKEI E+AGP G EY+GTGPFKF WK+DQY+H KF YQ V A Sbjct: 125 ILADQTQLAAVMPKEIAESAGPTGAKEYVGTGPFKFSGWKKDQYLHFTKFKIYQPVNKPA 184 Query: 231 SGLSGKKEALLQDVYFDIVPDSATRFSSFLAGTYDY-VDVSLDNLPQVEGSPDVKVNK-V 288 SG++GKK A ++D+Y+ PD++TR + ++G YD + V D + Q+E +P K+ Sbjct: 185 SGVAGKKAAKVKDIYWYFAPDASTRSAGLISGQYDIALSVPYDAVKQIESTPGKKIQPYT 244 Query: 289 LGSDINLVFNKKSPLFSNLKNREAVAAVIDADEILLGTVNSPDLYRLNSSYMYPENKTWY 348 G +I LVFNKK LF N+K R+AV +D +L Y+L PE K Y Sbjct: 245 YGMEI-LVFNKKQGLFKNVKARQAVNDALDKKVVLQSAFTDKRFYKLEPGLFRPEQKVLY 303 Query: 349 SEAGQENYNQKNPDKAKALLKESGYNGEEVVLLTTKELGGSFYNATIVVQKELESIGVKT 408 S+AG+E YN KN D++K LL+ SGY GE + +LT+++ YNA I Q++LE IG+K Sbjct: 304 SDAGKEVYNSKNLDRSKQLLQASGYKGETIKVLTSRDY-PHHYNAAIATQQQLEKIGMKV 362 Query: 409 KLDINDFATLLQKRADPNAWDIYVGLFTMPSTPSQLLYLNPSY---GFADDAKLAELTVK 465 KLD+ D+ATLL+ R +P +DI+ + P Q +L+ G+ +D K+ +L + Sbjct: 363 KLDVYDWATLLEHRENPGDYDIFFTGWDTGIVPHQYGFLDSKANWPGWTNDPKIDQLLDQ 422 Query: 466 LTSAVSPEEIKAANDALQQYEWEYLAAVKIGDTYSQSATRDKLVGLTTLAGYPNLANTKL 525 ++SA + +E KA LQQ W+YL + +G + +A DK+ G G P L N + Sbjct: 423 ISSAKTQDETKALIRELQQEFWQYLPVINLGTYKNVNACSDKVKGFKWFIG-PVLWNVSI 481 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.132 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,025,741,714 Number of extensions: 127540656 Number of successful extensions: 278350 Number of sequences better than 1.0e-05: 5089 Number of HSP's gapped: 271902 Number of HSP's successfully gapped: 5095 Length of query: 527 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 386 Effective length of database: 1,732,333,088 Effective search space: 668680571968 Effective search space used: 668680571968 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 134 (56.2 bits)