BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0520.0034.p (186 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q11F09.1 Q11F09_MESSB Putative uncharacterized protein 174 4e-42 Q1MME5.1 Q1MME5_RHIL3 Putative uncharacterized protein 172 9e-42 B5ZYK3.1 B5ZYK3_RHILW Putative uncharacterized protein 172 1e-41 B9J7S2.1 B9J7S2_AGRRK Putative uncharacterized protein 170 6e-41 B0IX24.1 B0IX24_RHILT Putative uncharacterized protein 169 9e-41 >Q11F09.1 Q11F09_MESSB Putative uncharacterized protein Length = 361 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 99/178 (55%), Positives = 123/178 (69%), Gaps = 6/178 (3%) Query: 2 AGGFIAAARHPLPAKYIKEHAALGGISIALELGQAIIQAEPEGPEAVLKAVVRKTKGKIL 61 +GGFIA+ R+PL A Y+K HAALGGIS+ALELG+AII AE +G AV++ + R TKG IL Sbjct: 186 SGGFIASCRNPLRASYVKRHAALGGISLALELGEAIIAAEGKGGTAVIETIARTTKGTIL 245 Query: 62 GRGKVISKNVRYS-GAFDIGTIDVEVAKNVFRLHVMNEYMAVDDRSSKRLATFPDVITTI 120 G++ K+V Y+ AFDIGT+ + + LHVMNEYMAVD R R ATFPDVITT+ Sbjct: 246 CEGRIAKKDVVYTKDAFDIGTVTLAGGE---VLHVMNEYMAVDGRDGVRTATFPDVITTL 302 Query: 121 DAATGLPVSVGDVVEGXXXXAVFAIDKSRIPLSASVKDPTVYPEVEEVLGIDLQSYAF 178 + P+SVG + EG V + KS IPLSASV DPTVYP VE +GI+L YA Sbjct: 303 -SEDAEPLSVGQLHEGMQIF-VLHVPKSVIPLSASVLDPTVYPYVEAQMGIELARYAL 358 >Q1MME5.1 Q1MME5_RHIL3 Putative uncharacterized protein Length = 365 Score = 172 bits (437), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 95/178 (53%), Positives = 120/178 (67%), Gaps = 3/178 (1%) Query: 2 AGGFIAAARHPLPAKYIKEHAALGGISIALELGQAIIQAEPEGPEAVLKAVVRKTKGKIL 61 +GGFIA+ R+PL A Y++ HAALGGIS+AL LG+AII AE G AV+ A+ + T G IL Sbjct: 186 SGGFIASCRNPLRASYVRTHAALGGISMALALGEAIIAAEKRGGSAVIDAICKTTGGHIL 245 Query: 62 GRGKVISKNVRYSG-AFDIGTIDVEVAKNVFRLHVMNEYMAVDDRSSKRLATFPDVITTI 120 G + K+V Y+ AFDIGTI V ++ LHVMNEYMAVDD KRLATFP VITT+ Sbjct: 246 AEGVITRKDVVYTKEAFDIGTITVGASEKSVTLHVMNEYMAVDDADGKRLATFPAVITTL 305 Query: 121 DAATGLPVSVGDVVEGXXXXAVFAIDKSRIPLSASVKDPTVYPEVEEVLGIDLQSYAF 178 + G P+SVG + G + + IPLSASV DPTVYP VE+ +GI++ YA Sbjct: 306 -SPEGEPLSVGQLQSGMHVF-ILHVPMEIIPLSASVLDPTVYPVVEKAMGIEIARYAL 361 >B5ZYK3.1 B5ZYK3_RHILW Putative uncharacterized protein Length = 365 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 95/178 (53%), Positives = 120/178 (67%), Gaps = 3/178 (1%) Query: 2 AGGFIAAARHPLPAKYIKEHAALGGISIALELGQAIIQAEPEGPEAVLKAVVRKTKGKIL 61 +GGFIA+ R+PL A Y++ HAALGGIS+AL LG+AII AE G AV+ A+ + T G IL Sbjct: 186 SGGFIASCRNPLRASYVRSHAALGGISMALALGEAIIAAEKRGGSAVIDAICKTTGGHIL 245 Query: 62 GRGKVISKNVRYSG-AFDIGTIDVEVAKNVFRLHVMNEYMAVDDRSSKRLATFPDVITTI 120 G + K+V Y+ AFDIGT+ V LHVMNEYMAVDD +RLATFP VITT+ Sbjct: 246 AEGVISRKDVVYTKEAFDIGTVIVGSGAKSVTLHVMNEYMAVDDADGRRLATFPAVITTL 305 Query: 121 DAATGLPVSVGDVVEGXXXXAVFAIDKSRIPLSASVKDPTVYPEVEEVLGIDLQSYAF 178 + G P+SVG + EG + + K IPLSASV DPTVYP VE+ +GI++ YA Sbjct: 306 -SPEGEPLSVGQLREGMQVF-ILHVPKDVIPLSASVLDPTVYPVVEKAMGIEIARYAL 361 >B9J7S2.1 B9J7S2_AGRRK Putative uncharacterized protein Length = 366 Score = 170 bits (430), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 93/182 (51%), Positives = 121/182 (66%), Gaps = 3/182 (1%) Query: 2 AGGFIAAARHPLPAKYIKEHAALGGISIALELGQAIIQAEPEGPEAVLKAVVRKTKGKIL 61 +GGFIA+ R+PL A Y++ HAALGGIS+AL LG+AII AE +G AV+ A+ + T G IL Sbjct: 186 SGGFIASCRNPLRASYVRTHAALGGISMALALGEAIIDAEKKGGSAVIDAICKTTGGHIL 245 Query: 62 GRGKVISKNVRYSG-AFDIGTIDVEVAKNVFRLHVMNEYMAVDDRSSKRLATFPDVITTI 120 G + K+V Y+ AFDIGTI V +HVMNEYMAV+D KRLATFP VITT+ Sbjct: 246 AEGVIARKDVIYTKEAFDIGTITVGAGDKAVTMHVMNEYMAVEDTDGKRLATFPSVITTL 305 Query: 121 DAATGLPVSVGDVVEGXXXXAVFAIDKSRIPLSASVKDPTVYPEVEEVLGIDLQSYAFGK 180 + G P+SVG + EG + + IPLSASV DPTVYP VE+ + I++ YA Sbjct: 306 -SPEGEPLSVGQLHEGMHVF-ILHVPMDIIPLSASVLDPTVYPSVEKAMRIEIAKYALAG 363 Query: 181 EK 182 ++ Sbjct: 364 KR 365 >B0IX24.1 B0IX24_RHILT Putative uncharacterized protein Length = 365 Score = 169 bits (429), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 94/178 (52%), Positives = 118/178 (66%), Gaps = 3/178 (1%) Query: 2 AGGFIAAARHPLPAKYIKEHAALGGISIALELGQAIIQAEPEGPEAVLKAVVRKTKGKIL 61 +GGFIA+ R+PL A Y++ HAALGGIS+AL LG+AII AE G V+ A+ + T G IL Sbjct: 186 SGGFIASCRNPLRASYVRSHAALGGISMALALGEAIIAAEKRGGSDVIDAICKTTGGHIL 245 Query: 62 GRGKVISKNVRYSG-AFDIGTIDVEVAKNVFRLHVMNEYMAVDDRSSKRLATFPDVITTI 120 G + K+V Y+ AFDIGTI V + LHVMNEYMAVDD RLATFP VITT+ Sbjct: 246 AEGVITRKDVVYTKEAFDIGTITVGAGETSVTLHVMNEYMAVDDADGGRLATFPAVITTL 305 Query: 121 DAATGLPVSVGDVVEGXXXXAVFAIDKSRIPLSASVKDPTVYPEVEEVLGIDLQSYAF 178 + G P+SVG + EG + + IPLSASV DPTVYP VE+ +GI++ YA Sbjct: 306 -SPEGEPLSVGQLKEGVHVF-ILHVPMDIIPLSASVLDPTVYPVVEKAMGIEIARYAL 361 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.135 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,009,589,610 Number of extensions: 36057464 Number of successful extensions: 90398 Number of sequences better than 1.0e-05: 36 Number of HSP's gapped: 90382 Number of HSP's successfully gapped: 36 Length of query: 186 Length of database: 3,060,696,203 Length adjustment: 128 Effective length of query: 58 Effective length of database: 1,854,806,283 Effective search space: 107578764414 Effective search space used: 107578764414 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 127 (53.5 bits)