BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0520.0024.p (375 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B0N0T3.1 B0N0T3_9FIRM Putative uncharacterized protein 269 3e-70 C3RN66.1 C3RN66_9MOLU ROK family protein (Fragment) 244 9e-63 B8CYI5.1 B8CYI5_HALOH Glucokinase EC=2.7.1.2 166 5e-39 A5CYL2.1 A5CYL2_PELTS Transcriptional regulator/sugar kinase 162 4e-38 Q8RDE9.1 Q8RDE9_THETN Transcriptional regulator 154 2e-35 >B0N0T3.1 B0N0T3_9FIRM Putative uncharacterized protein Length = 318 Score = 269 bits (688), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 143/320 (44%), Positives = 193/320 (60%), Gaps = 5/320 (1%) Query: 51 YTIGVDLGGTNIKAALFDASFNAIGEISLSTEAAKGPAHVLSRIRLAVQQLTEDKGIPLQ 110 Y +GVDLGGT IK LFD + + +T A+ G VL RI ++ L + + Sbjct: 2 YYLGVDLGGTTIKEGLFDEQLQLLKMVQKNTGASLGADIVLKRIEKCLEILVLKNNLSFE 61 Query: 111 SITCMGLGIPGLLDPEEGMSLFSPNFPGWEHIHIVNEMKLYYDFPIFIDNDVRVNLYGEW 170 I +G+G+PGLL+ +G+SLFSPNF W ++ I + + P IDNDVR++LYGE Sbjct: 62 QIDALGIGVPGLLNRNDGISLFSPNFNNWHNVKIKEWFEHKWLIPTVIDNDVRMHLYGEL 121 Query: 171 QYGAARGYKNVVXXXXXXXXXXXIVSDGKVVYGTTFSAGEIGHMNMFXXXXXXXXXXXXX 230 +GA +G+KN++ IV DG V+YG S GEIGHMNM+ Sbjct: 122 YFGAGKGFKNIILIAIGTGLGSGIVVDGHVLYGANDSVGEIGHMNMYRHGRACRCGSSGC 181 Query: 231 XXXYVSAVGMVNTFTEKLAEGRPSIIQAWTNGNNGQITAQMISEAYDLEDPLAAEVMHET 290 YVSAVGM+NTF EK + SI+ W N N +ITA+MI +AYDL D +A + ET Sbjct: 182 LGRYVSAVGMINTFKEKDID-HMSIVNRWVN-NCDEITAKMICQAYDLNDSIAVATLKET 239 Query: 291 GVLLGFGLANVINLLNPEVIVVGGGMSXXXXAGERLLHSVRETVKDHALKLSGSKCSIVQ 350 G +LG+G+ N+INL NPE I++GGG+S AGERLL S RE HAL+++ + C +V Sbjct: 240 GEILGYGITNLINLFNPERIIIGGGVS---NAGERLLASTREVAAIHALEIASNNCDLVV 296 Query: 351 AELGSRAGTLGAAVYAHRRL 370 AELG +AG GAA YA R+L Sbjct: 297 AELGEQAGMYGAAKYAKRKL 316 >C3RN66.1 C3RN66_9MOLU ROK family protein (Fragment) Length = 298 Score = 244 bits (623), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 130/293 (44%), Positives = 177/293 (60%), Gaps = 5/293 (1%) Query: 78 SLSTEAAKGPAHVLSRIRLAVQQLTEDKGIPLQSITCMGLGIPGLLDPEEGMSLFSPNFP 137 S +T A+ G VL RI ++ L + + I +G+G+PGLL+ +G+SLFSPNF Sbjct: 9 SKNTGASLGADIVLKRIEKCLEILVLKNNLSFEQIDALGIGVPGLLNRNDGISLFSPNFN 68 Query: 138 GWEHIHIVNEMKLYYDFPIFIDNDVRVNLYGEWQYGAARGYKNVVXXXXXXXXXXXIVSD 197 W ++ I + + P IDNDVR++LYGE +GA +G+KN++ IV D Sbjct: 69 NWHNVKIKEWFEHKWLIPTVIDNDVRMHLYGELYFGAGKGFKNIILIAIGTGLGSGIVVD 128 Query: 198 GKVVYGTTFSAGEIGHMNMFXXXXXXXXXXXXXXXXYVSAVGMVNTFTEKLAEGRPSIIQ 257 G V+YG S GEIGHMNM+ YVSAVGM+NTF EK + SI+ Sbjct: 129 GHVLYGANDSVGEIGHMNMYRHGRACRCGSSGCLGRYVSAVGMINTFKEKDID-HMSIVN 187 Query: 258 AWTNGNNGQITAQMISEAYDLEDPLAAEVMHETGVLLGFGLANVINLLNPEVIVVGGGMS 317 W N N +ITA+MI +AYDL D + + ETG +LG+G+ N+INL NPE I++GGG+S Sbjct: 188 RWVN-NCDEITAKMICQAYDLNDSIVVATLKETGEILGYGITNLINLFNPERIIIGGGVS 246 Query: 318 XXXXAGERLLHSVRETVKDHALKLSGSKCSIVQAELGSRAGTLGAAVYAHRRL 370 AGERLL S RE HAL+++ + C +V AELG +AG GAA YA R+L Sbjct: 247 ---NAGERLLASTREVAAIHALEIASNNCDLVVAELGEQAGMYGAAKYAKRKL 296 >B8CYI5.1 B8CYI5_HALOH Glucokinase EC=2.7.1.2 Length = 322 Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 96/319 (30%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 48 MKTYTIGVDLGGTNIKAALFDASFNAIGEISLSTEAAKGPAHVLSRIRLAVQQLTEDKGI 107 MK Y +GVDLGGT I AL DA + + L TEA KG V+ I ++ + ++KG+ Sbjct: 1 MKEYYVGVDLGGTKILTALADARGKIVAKKKLPTEARKGEEKVIQNIVSSIDAVLQEKGL 60 Query: 108 PLQSITCMGLGIPGLLDPEEGMSLFSPNFPGWEHIHIVNEMKLYYDFPIFIDNDVRVNLY 167 + + +G+G PG L+ +EG+ +PN GW ++HI + ++ P+ ++ND Sbjct: 61 SREDVITLGVGSPGPLNTQEGIIYLAPNL-GWRNVHIKDILEEETGIPVILENDANAAAL 119 Query: 168 GEWQYGAARGYKNVVXXXXXXXXXXXIVSDGKVVYGTTFSAGEIGHMNMFXXXXXXXXXX 227 GE +GA + N++ I+ + K+ +G AGE+GHM + Sbjct: 120 GEKWFGAGQDVDNLIYITVSTGIGGGIIINKKIFHGINDGAGEVGHMVIEPGGPVCGCGN 179 Query: 228 XXXXXXYVSAVGMVNTFTEKLAEGRPSIIQAWTNGNNGQITAQMISEAYDLEDPLAAEVM 287 S + E + E + +++ + G+ +I +I+ A D +A ++ Sbjct: 180 RGCFEAVASGTAINKMGREAVKENKATLLMELSGGDPEKIDGSLIARAARQGDEVARKIW 239 Query: 288 HETGVLLGFGLANVINLLNPEVIVVGGGMSXXXXAGERLLHSVRETVKDHALKLSGSKCS 347 + G LG GLAN++N+ NPE+I++GGG+ AG+ ++ +++++KDHAL+ + + Sbjct: 240 DKAGYYLGIGLANLLNIFNPEMIILGGGV---MNAGDLIMEPMKKSLKDHALESAFNSVE 296 Query: 348 IVQAELGSRAGTLGAAVYA 366 I QAELG+ G +GA A Sbjct: 297 IRQAELGNDTGVIGAVAVA 315 >A5CYL2.1 A5CYL2_PELTS Transcriptional regulator/sugar kinase Length = 337 Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 109/316 (34%), Positives = 159/316 (50%), Gaps = 4/316 (1%) Query: 51 YTIGVDLGGTNIKAALFDASFNAIGEISLSTEAAKGPAHVLSRIRLAVQQLTEDKGIPLQ 110 Y IGVDLGGT I AL + EI L TEA +G V+ RI +V+Q+ E+ +P Q Sbjct: 5 YVIGVDLGGTKIYTALAADDGRVLSEIKLPTEAGRGLQGVIDRIVHSVEQVRENVAVPPQ 64 Query: 111 SITCMGLGIPGLLDPEEGMSLFSPNFPGWEHIHIVNEMKLYYDFPIFIDNDVRVNLYGEW 170 + + LG PG LD G+ F+PN W ++ I ++ P+ +DND + GE Sbjct: 65 KVLALALGAPGPLDTAGGVIHFAPNLR-WNNVPIRQILEERLSLPVLLDNDANLAALGEH 123 Query: 171 QYGAARGYKNVVXXXXXXXXXXXIVSDGKVVYGTTFSAGEIGHMNMFXXXXXXXXXXXXX 230 +GA RG N+V ++ DGK+ G++ AGEIGHM + Sbjct: 124 VFGAGRGCGNMVYITVSTGVGGGLILDGKLYRGSSDGAGEIGHMTVLPDGPVCSCGNRGC 183 Query: 231 XXXYVSAVGMVNTFTEKLAEGRPSIIQAWTNGNNGQITAQMISEAYDLEDPLAAEVMHET 290 S + E +A G I A G+ G+I A ++ A DP AA ++ Sbjct: 184 LEAMASGTAIARAAAELVASGGGRKILAAAGGDPGRINAAAVAAAAAGGDPEAAAIIDRA 243 Query: 291 GVLLGFGLANVINLLNPEVIVVGGGMSXXXXAGERLLHSVRETVKDHALKLSGSKCSIVQ 350 LG G+A+++NLLNP ++V+GGG+ GE + VR V+ AL+ + S+ +V Sbjct: 244 AGYLGIGVASILNLLNPAMVVLGGGV---MEIGEPVWKGVRREVQARALQAARSRARLVP 300 Query: 351 AELGSRAGTLGAAVYA 366 AELG RAG +GA A Sbjct: 301 AELGGRAGVMGAIALA 316 >Q8RDE9.1 Q8RDE9_THETN Transcriptional regulator Length = 315 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 96/316 (30%), Positives = 154/316 (48%), Gaps = 5/316 (1%) Query: 48 MKTYTIGVDLGGTNIKAALFDASFNAIGEISLSTEAAKGPAHVLSRIRLAVQQLTEDKGI 107 MK + GVDLGGT I + D + N I I + T A KGP V+ RI ++ Q+ +D G+ Sbjct: 1 MKKFLCGVDLGGTKISTGIVDENGNIIKSIKIPTMAEKGPDVVIERIEESIYQVLKDTGL 60 Query: 108 PLQSITCMGLGIPGLLDPEEGMSLFSPNFPGWEHIHIVNEMKLYYDFPIFIDNDVRVNLY 167 + ++ +G+G PG L+ ++G+ + PN P W ++ IV + + ++ND Sbjct: 61 EMSNLKGIGIGSPGPLNAKKGIVISPPNLPHWSNVPIVEILSKRLGIEVRLENDANAAAI 120 Query: 168 GEWQYGAARGYKNVVXXXXXXXXXXXIVSDGKVVYGTTFSAGEIGHMNMFXXXXXXXXXX 227 GE +G+ RG N V ++ +GK+ G +A EIGH + Sbjct: 121 GEHLFGSGRGVDNFVYITVSTGIGGGVIIEGKLYSGENSNAAEIGHHTINFDGPRCNCGN 180 Query: 228 XXXXXXYVSAVGMVNTFTEKLAEGRPSIIQAWTNGNNGQITAQMISEAYDLEDPLAAEVM 287 Y S + E + +G + I+ G++ A+ + EA L D A E++ Sbjct: 181 YGCFEAYASGTAIARFAREGIEKGIKTKIKELA--GEGEVKAEHVFEAAKLGDEFAKELV 238 Query: 288 HETGVLLGFGLANVINLLNPEVIVVGGGMSXXXXAGERLLHSVRETVKDHALKLSGSKCS 347 + LG G+AN++ NP I +GGG+S + L + ETV+ ALK + C Sbjct: 239 EKEAFYLGVGIANIMAFYNPRKIAIGGGVSAQW---DMLYEKMMETVRKKALKPNAEVCE 295 Query: 348 IVQAELGSRAGTLGAA 363 +V+A+LG G LGAA Sbjct: 296 VVKAQLGENIGVLGAA 311 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.137 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,985,963,483 Number of extensions: 74738362 Number of successful extensions: 177087 Number of sequences better than 1.0e-05: 2235 Number of HSP's gapped: 173603 Number of HSP's successfully gapped: 2258 Length of query: 375 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 238 Effective length of database: 1,770,017,148 Effective search space: 421264081224 Effective search space used: 421264081224 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 132 (55.5 bits)