BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0520.0006.p
         (141 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KIS3.1 B3KIS3_9BACI Putative uncharacterized protein                150   3e-35
A4VZV0.1 A4VZV0_STRS2 Cell division initiation protein                 55   3e-06
A4VTL4.1 A4VTL4_STRSY Cell division initiation protein                 55   3e-06
B9WXH0.1 B9WXH0_STRSU DivIVA family protein                            55   3e-06
Q24TG9.1 Q24TG9_DESHY Putative uncharacterized protein                 54   3e-06

>B3KIS3.1 B3KIS3_9BACI Putative uncharacterized protein
          Length = 125

 Score =  150 bits (380), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/132 (59%), Positives = 99/132 (75%), Gaps = 9/132 (6%)

Query: 11  MDEHMKRRLDKQRKLFSQLGITLDALTIHEKEFSMKLRGYDAEEVDTFLDSVIKDYERFY 70
           MDEHMKRRLDKQ+KLF QLGI LDAL+IHEK FS KLRGYD EEVD+FLD VI+DYERFY
Sbjct: 1   MDEHMKRRLDKQKKLFRQLGIQLDALSIHEKNFSNKLRGYDQEEVDSFLDEVIQDYERFY 60

Query: 71  ATIADLMDKWQEQQIELRELKEKSK-QAEXXXXXXXXXRGIDPMDLEDVILKLEANVRQL 129
           ATI+DLMDKWQEQQI +R+L+   K +AE           ++P ++E+ + KLEA++R L
Sbjct: 61  ATISDLMDKWQEQQITIRDLRAGVKPEAERP--------ALNPEEIEETVAKLEADLRLL 112

Query: 130 KDRLPRSSESYL 141
           K ++      Y+
Sbjct: 113 KKQIRPEQRFYI 124


>A4VZV0.1 A4VZV0_STRS2 Cell division initiation protein
          Length = 229

 Score = 54.7 bits (130), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 7/63 (11%)

Query: 31 ITLDALTIHEKEFSMKLRGYDAEEVDTFLDSVIKDYERFYATIADLMDKWQEQQIELREL 90
          + L AL + +K F+ K RGYDA+EVD FLD V +DYE       DL+ K  +Q++EL+ L
Sbjct: 1  MALTALELKDKTFATKFRGYDADEVDDFLDIVTRDYE-------DLIRKNHDQELELKNL 53

Query: 91 KEK 93
          +E+
Sbjct: 54 RER 56


>A4VTL4.1 A4VTL4_STRSY Cell division initiation protein
          Length = 229

 Score = 54.7 bits (130), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 7/63 (11%)

Query: 31 ITLDALTIHEKEFSMKLRGYDAEEVDTFLDSVIKDYERFYATIADLMDKWQEQQIELREL 90
          + L AL + +K F+ K RGYDA+EVD FLD V +DYE       DL+ K  +Q++EL+ L
Sbjct: 1  MALTALELKDKTFATKFRGYDADEVDDFLDIVTRDYE-------DLIRKNHDQELELKNL 53

Query: 91 KEK 93
          +E+
Sbjct: 54 RER 56


>B9WXH0.1 B9WXH0_STRSU DivIVA family protein
          Length = 229

 Score = 54.7 bits (130), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 7/63 (11%)

Query: 31 ITLDALTIHEKEFSMKLRGYDAEEVDTFLDSVIKDYERFYATIADLMDKWQEQQIELREL 90
          + L AL + +K F+ K RGYDA+EVD FLD V +DYE       DL+ K  +Q++EL+ L
Sbjct: 1  MALTALELKDKTFATKFRGYDADEVDDFLDIVTRDYE-------DLIRKNHDQELELKNL 53

Query: 91 KEK 93
          +E+
Sbjct: 54 RER 56


>Q24TG9.1 Q24TG9_DESHY Putative uncharacterized protein
          Length = 170

 Score = 54.3 bits (129), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/62 (43%), Positives = 40/62 (64%)

Query: 31 ITLDALTIHEKEFSMKLRGYDAEEVDTFLDSVIKDYERFYATIADLMDKWQEQQIELREL 90
          + L  + I  KEF   +RGY+ EEV+ FL+S+ K+YE  YA I +L DK Q  + EL++ 
Sbjct: 19 MALTPIDIQNKEFRKGVRGYNTEEVNKFLESISKEYEGVYAEIFELRDKVQRLEAELKQY 78

Query: 91 KE 92
          K+
Sbjct: 79 KQ 80


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.134    0.364 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 697,870,115
Number of extensions: 24213608
Number of successful extensions: 90623
Number of sequences better than 1.0e-05: 83
Number of HSP's gapped: 90655
Number of HSP's successfully gapped: 83
Length of query: 141
Length of database: 3,060,696,203
Length adjustment: 104
Effective length of query: 37
Effective length of database: 2,080,910,643
Effective search space: 76993693791
Effective search space used: 76993693791
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 126 (53.1 bits)