BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0520.0005.p
         (127 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KIS2.1 B3KIS2_9BACI Sporulation protein, yteA family                124   2e-27
B3KGA8.1 B3KGA8_9BACI Sporulation protein, yteA family                107   4e-22
B7GK06.1 B7GK06_ANOFW DnaK suppressor protein                         106   6e-22
Q2B8B9.1 Q2B8B9_9BACI Putative uncharacterized protein                 99   1e-19
Q8ESP2.1 Q8ESP2_OCEIH Hypothetical conserved protein                   99   1e-19

>B3KIS2.1 B3KIS2_9BACI Sporulation protein, yteA family
          Length = 187

 Score =  124 bits (311), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/87 (65%), Positives = 66/87 (75%)

Query: 40  SLRNSTGELSSADNHPADTGTETFERSRDLAINRSLSEELSDIEAALQRMKDGTYGICVV 99
           SLR+STGELS+ADNHPAD GTE FER RDLAI  +L  EL  I+AALQRM  G YG C  
Sbjct: 38  SLRDSTGELSAADNHPADVGTEVFERGRDLAIQETLERELEQIDAALQRMDQGEYGTCAE 97

Query: 100 SSQEIPYERLEAVPYTPYAVEHVPPRE 126
             +EIPYERLEA+PYT Y +EH P ++
Sbjct: 98  CGREIPYERLEALPYTAYCLEHTPRKD 124


>B3KGA8.1 B3KGA8_9BACI Sporulation protein, yteA family
          Length = 246

 Score =  107 bits (267), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 2/123 (1%)

Query: 1   MSHLSNEQLASXXXXXXXXXXXXXQHFSQNGEENSLLGDSLRNSTGELSSADNHPADTGT 60
           MSHL+ EQL +             +    N +    LG+S R+ TGELS  DNHP D GT
Sbjct: 1   MSHLTQEQLHNLQQKLMDRKVELERRMVNNDQHG--LGESERDMTGELSHIDNHPGDVGT 58

Query: 61  ETFERSRDLAINRSLSEELSDIEAALQRMKDGTYGICVVSSQEIPYERLEAVPYTPYAVE 120
           E FER +DLA+   + +EL  +  +L+ +  G YG+C+  SQ IPYERLE +P T Y VE
Sbjct: 59  EVFERGKDLALQDRVDQELQRVIFSLEAIHHGRYGVCLTCSQPIPYERLEVIPDTQYCVE 118

Query: 121 HVP 123
           H P
Sbjct: 119 HTP 121


>B7GK06.1 B7GK06_ANOFW DnaK suppressor protein
          Length = 243

 Score =  106 bits (265), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 53/97 (54%), Positives = 65/97 (67%), Gaps = 1/97 (1%)

Query: 25  QHFSQNGEENSLLGDSLRNSTGELSSADNHPADTGTETFERSRDLAINRSLSEELSDIEA 84
           Q   QN +   L   S  +S GELS+ DNHPADTGTE +ER +D+A+N     EL DIE 
Sbjct: 20  QRLKQN-DHFGLTRTSAHDSVGELSNYDNHPADTGTELYEREKDIALNEHTERELHDIER 78

Query: 85  ALQRMKDGTYGICVVSSQEIPYERLEAVPYTPYAVEH 121
           ALQ M+DGTYGIC V  + IP+ERLEA+P T Y  +H
Sbjct: 79  ALQAMEDGTYGICEVCGKSIPFERLEAIPTTTYCKDH 115


>Q2B8B9.1 Q2B8B9_9BACI Putative uncharacterized protein
          Length = 251

 Score = 99.0 bits (245), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/95 (53%), Positives = 60/95 (63%)

Query: 29  QNGEENSLLGDSLRNSTGELSSADNHPADTGTETFERSRDLAINRSLSEELSDIEAALQR 88
           Q+ +   L  D    S GELSS DNHP D GTE +ER +DLA+N     ELS+I  ALQ 
Sbjct: 26  QSNDNFDLTRDHPHESVGELSSYDNHPGDEGTELYEREKDLALNEHYKLELSNILKALQA 85

Query: 89  MKDGTYGICVVSSQEIPYERLEAVPYTPYAVEHVP 123
           +  GTYGIC V  +EIP ERLEA+P T Y  EH P
Sbjct: 86  IDQGTYGICEVCHKEIPKERLEALPNTTYCKEHSP 120


>Q8ESP2.1 Q8ESP2_OCEIH Hypothetical conserved protein
          Length = 224

 Score = 99.0 bits (245), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/81 (54%), Positives = 57/81 (70%)

Query: 42  RNSTGELSSADNHPADTGTETFERSRDLAINRSLSEELSDIEAALQRMKDGTYGICVVSS 101
           R   GELS+ DNHP DTGTE FER +D+A+     +EL DI AAL  +++GTYGIC V  
Sbjct: 38  REDVGELSNYDNHPGDTGTELFEREKDIALQEHTEKELEDINAALHAIEEGTYGICTVCG 97

Query: 102 QEIPYERLEAVPYTPYAVEHV 122
           ++IP+ERLEA+P T   V+H 
Sbjct: 98  EDIPHERLEAIPTTDRCVKHA 118


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.307    0.124    0.340 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 639,944,721
Number of extensions: 20391504
Number of successful extensions: 47045
Number of sequences better than 1.0e-05: 227
Number of HSP's gapped: 47076
Number of HSP's successfully gapped: 227
Length of query: 127
Length of database: 3,060,696,203
Length adjustment: 92
Effective length of query: 35
Effective length of database: 2,193,962,823
Effective search space: 76788698805
Effective search space used: 76788698805
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 126 (53.1 bits)