BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0515.0039.p (214 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0F021.1 C0F021_9FIRM Putative uncharacterized protein 145 3e-33 A3ZGM2.1 A3ZGM2_CAMJE Putative sugar transferase 143 1e-32 A3YLZ8.1 A3YLZ8_CAMJE Putative sugar transferase 143 1e-32 Q0P8I0.1 Q0P8I0_CAMJE Putative sugar transferase 143 1e-32 Q5M6S2.1 Q5M6S2_CAMJE Putative sugar transferase 141 4e-32 >C0F021.1 C0F021_9FIRM Putative uncharacterized protein Length = 382 Score = 145 bits (365), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 79/199 (39%), Positives = 113/199 (56%), Gaps = 3/199 (1%) Query: 1 MPSLNIATYIKECMDSVVAQTLQDIEIICVDAGSTDGTREILQEYATXXXXXXXXXXXXK 60 +P+ N+ Y+ ECM+SVV QTL+DIEIIC++ GSTDG+ EIL+ YA Sbjct: 8 IPTYNVEMYLVECMESVVNQTLKDIEIICINDGSTDGSLEILKSYAQKDDRIVLVDKENG 67 Query: 61 SYGYQVNWGFDVAKGKYLGIVETDDYIEPEMFQTLYDVAIXXXXXADFVKSDFFFFA-DV 119 YG +N G D A G+Y+GIVE DD+I M+ LY+ A+ DF+K+DF+ F D Sbjct: 68 GYGIGMNIGLDKATGEYIGIVEPDDFIPLNMYSDLYEKAV--ENDLDFIKADFYRFKRDS 125 Query: 120 PKGRQTLEYKLFGSSSTSVKRVSHTDYTNRLVPIDTFMWNGIYKRQFIQKYNIRLNETQG 179 L Y + V + T + + W+GIYKR FI++++IR NET G Sbjct: 126 ETEDMELVYNHLSPNKEDYNIVFNPSETPKAIRYIMNTWSGIYKRSFIEEFHIRHNETPG 185 Query: 180 AAYQDAGFRYQVALLVEKG 198 A++QD GF +Q ++G Sbjct: 186 ASFQDNGFWFQTFAYAKRG 204 >A3ZGM2.1 A3ZGM2_CAMJE Putative sugar transferase Length = 444 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/207 (40%), Positives = 118/207 (57%), Gaps = 26/207 (12%) Query: 1 MPSLNIATYIKECMDSVVAQTLQDIEIICVDAGSTDGTREILQEYATXXXXXXXXXXXXK 60 +PSLN +YI+EC+DS++ QTL+DIEI+C+DA STDGT E+L+ Y K Sbjct: 12 VPSLNSISYIRECIDSILNQTLKDIEILCIDANSTDGTLEVLKNYEKKDKRLRVIISDKK 71 Query: 61 SYGYQVNWGFDVAKGKYLGIVETDDYIEPEMFQTLYDVAIXXXXXADFVKSDFFFFADVP 120 SYGYQ+N G AKG+YLGIVE+DDYI+ M++ LY++A + VK DF+ FA Sbjct: 72 SYGYQMNLGIKEAKGEYLGIVESDDYIKTNMYERLYEIA--KKNDCEVVKGDFYIFA--- 126 Query: 121 KGRQTLEYKLFGSSS-TSVKRVSHTDYTNRLV----PIDTFMWN------GIYKRQFIQK 169 +G + +V R S D N V I F+ + GIY+ ++ Sbjct: 127 ----------YGKTEYVNVLRNSCEDIYNYKVNWNKDIRIFLGSDGINPIGIYRLDLLRT 176 Query: 170 YNIRLNETQGAAYQDAGFRYQVALLVE 196 I+LNET GA+YQD G +Q+ L + Sbjct: 177 NQIKLNETPGASYQDNGLWFQIFALAK 203 >A3YLZ8.1 A3YLZ8_CAMJE Putative sugar transferase Length = 444 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/207 (40%), Positives = 118/207 (57%), Gaps = 26/207 (12%) Query: 1 MPSLNIATYIKECMDSVVAQTLQDIEIICVDAGSTDGTREILQEYATXXXXXXXXXXXXK 60 +PSLN +YI+EC+DS++ QTL+DIEI+C+DA STDGT E+L+ Y K Sbjct: 12 VPSLNSISYIRECIDSILNQTLKDIEILCIDANSTDGTLEVLKNYEKKDKRLRVIISDKK 71 Query: 61 SYGYQVNWGFDVAKGKYLGIVETDDYIEPEMFQTLYDVAIXXXXXADFVKSDFFFFADVP 120 SYGYQ+N G AKG+YLGIVE+DDYI+ M++ LY++A + VK DF+ FA Sbjct: 72 SYGYQMNLGIKEAKGEYLGIVESDDYIKTNMYERLYEIA--KKNDCEVVKGDFYIFA--- 126 Query: 121 KGRQTLEYKLFGSSS-TSVKRVSHTDYTNRLV----PIDTFMWN------GIYKRQFIQK 169 +G + +V R S D N V I F+ + GIY+ ++ Sbjct: 127 ----------YGKTEYVNVLRNSCEDIYNYKVNWNKDIRIFLGSDGINQIGIYRLDLLRT 176 Query: 170 YNIRLNETQGAAYQDAGFRYQVALLVE 196 I+LNET GA+YQD G +Q+ L + Sbjct: 177 NQIKLNETPGASYQDNGLWFQIFALAK 203 >Q0P8I0.1 Q0P8I0_CAMJE Putative sugar transferase Length = 445 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 84/207 (40%), Positives = 118/207 (57%), Gaps = 26/207 (12%) Query: 1 MPSLNIATYIKECMDSVVAQTLQDIEIICVDAGSTDGTREILQEYATXXXXXXXXXXXXK 60 +PSLN +YI+EC+DS++ QTL+DIEI+C+DA STDGT E+L+ Y K Sbjct: 13 VPSLNSISYIRECIDSILNQTLKDIEILCIDANSTDGTLEVLKNYEKKDKRLRVIISDKK 72 Query: 61 SYGYQVNWGFDVAKGKYLGIVETDDYIEPEMFQTLYDVAIXXXXXADFVKSDFFFFADVP 120 SYGYQ+N G AKG+YLGIVE+DDYI+ M++ LY++A + VK DF+ FA Sbjct: 73 SYGYQMNLGIKEAKGEYLGIVESDDYIKTNMYERLYEIA--KKNDCEVVKGDFYIFA--- 127 Query: 121 KGRQTLEYKLFGSSS-TSVKRVSHTDYTNRLV----PIDTFMWN------GIYKRQFIQK 169 +G + +V R S D N V I F+ + GIY+ ++ Sbjct: 128 ----------YGKTEYVNVLRNSCEDIYNYKVNWNKDIRIFLGSDGINPIGIYRLDLLRT 177 Query: 170 YNIRLNETQGAAYQDAGFRYQVALLVE 196 I+LNET GA+YQD G +Q+ L + Sbjct: 178 NQIKLNETPGASYQDNGLWFQIFALAK 204 >Q5M6S2.1 Q5M6S2_CAMJE Putative sugar transferase Length = 349 Score = 141 bits (355), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 81/196 (41%), Positives = 114/196 (58%), Gaps = 6/196 (3%) Query: 1 MPSLNIATYIKECMDSVVAQTLQDIEIICVDAGSTDGTREILQEYATXXXXXXXXXXXXK 60 +PS N A YIKEC+DSV+ Q+L++IEI+C+DA S DGT +IL+ Y K Sbjct: 16 IPSYNSAKYIKECLDSVIFQSLKEIEILCIDAYSIDGTIDILKSYEKQDSRIKIIFSKKK 75 Query: 61 SYGYQVNWGFDVAKGKYLGIVETDDYIEPEMFQTLYDVAIXXXXXADFVKSDFFFFADVP 120 S GYQ+N G AKG+Y IVE+DDY++ +M + LY A+ VKSDF F D Sbjct: 76 SLGYQINLGLKEAKGEYFTIVESDDYVKLDMCEKLY--ALACNYDCQVVKSDFIGFKDKR 133 Query: 121 KGRQTLEYKLFGSSSTSVKRVSHTDYTNRLVPIDTFMWN--GIYKRQFIQKYNIRLNETQ 178 R + + K+++ Y N + I+++ N +YK FI+KY+IR NETQ Sbjct: 134 SQRVFKNLSICYDQTLYNKKINS--YLNLNIIINSWNMNQSSLYKMDFIKKYDIRANETQ 191 Query: 179 GAAYQDAGFRYQVALL 194 GA+YQD G +Q+ L Sbjct: 192 GASYQDIGLWFQILSL 207 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.137 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,073,180,081 Number of extensions: 37935740 Number of successful extensions: 70740 Number of sequences better than 1.0e-05: 940 Number of HSP's gapped: 71061 Number of HSP's successfully gapped: 947 Length of query: 214 Length of database: 3,060,696,203 Length adjustment: 130 Effective length of query: 84 Effective length of database: 1,835,964,253 Effective search space: 154220997252 Effective search space used: 154220997252 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 128 (53.9 bits)