BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0515.0036.p (373 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q65UU2.1 Q65UU2_MANSM Glf protein 530 e-149 B0BR59.1 B0BR59_ACTPJ UDP-galactopyranose mutase 528 e-148 A8SAW9.1 A8SAW9_9FIRM Putative uncharacterized protein 527 e-148 A6VMJ4.1 A6VMJ4_ACTSZ UDP-galactopyranose mutase EC=5.4.99.9 526 e-147 B0N1W0.1 B0N1W0_9FIRM Putative uncharacterized protein 523 e-147 >Q65UU2.1 Q65UU2_MANSM Glf protein Length = 367 Score = 530 bits (1365), Expect = e-149, Method: Compositional matrix adjust. Identities = 244/365 (66%), Positives = 304/365 (83%), Gaps = 2/365 (0%) Query: 2 KYDYLIVGAGPYGAIFAHEAMKCNKTCLVIDKRDHIGGNIYTEQVEGINVHKYGAHIFHT 61 KYDYLIVGAG +G+IFA+EA K K CLVI+KRDHIGGN YT+ VEGINVHKYGAHIFHT Sbjct: 3 KYDYLIVGAGLFGSIFAYEATKRGKKCLVIEKRDHIGGNCYTQNVEGINVHKYGAHIFHT 62 Query: 62 NDKEVWEYVNRFATFNRYTNSPIANFNGEIYNLPFNMNTFYRLWGVSDPTEAEKIIETQ- 120 ++K VW+Y+ +FA FNR+TNSPIA + E+Y+LPFNM TF ++WGV P EAE I+ Q Sbjct: 63 SNKVVWDYIQQFAEFNRFTNSPIARYKDELYSLPFNMLTFNKMWGVITPQEAEAKIKEQI 122 Query: 121 -RLKCEEPQNLEEQALSLVGRDIYEKLIKGYTEKQWGRDCKDLPAFIIKRLPVRFTWDNN 179 + EP+NLEEQA+SLVGRDIYEKLIKGYTEKQWGR C +LPAFIIKRLPVR+T+DNN Sbjct: 123 AQESITEPKNLEEQAISLVGRDIYEKLIKGYTEKQWGRKCTELPAFIIKRLPVRYTYDNN 182 Query: 180 YFNDQYQGIPVGGYTGIIKKLLEGSEVRLNTDYFAQRDYFDHIATKTIYTGMLDEFFNYQ 239 YF D YQGIP+GGYTGI +++L+G EV+L D+F +R+Y++++A K ++TGM+DE+F YQ Sbjct: 183 YFYDTYQGIPIGGYTGIFERMLDGIEVKLGVDFFTEREYYENLADKIVFTGMIDEYFGYQ 242 Query: 240 FGPLEYRTLRFDSEILDQPNFQGNAVVNYTDKETPFTRIIEHKHFEFGTQPKTVVTREYS 299 FG LEYR+LRFD+E+LD PN+QGNAVVNYT+ E P+TRIIEHKHFE+GTQPKTV+TRE+S Sbjct: 243 FGKLEYRSLRFDNEVLDMPNYQGNAVVNYTEAEVPYTRIIEHKHFEYGTQPKTVITREHS 302 Query: 300 KEYENGDEPYYPVNDLKNSARYLSYKELAEGEENVIFGGRLAEYKYYDMWQIVRNSLDAA 359 KEYE GDEPYYP+ND +N+ Y YKELA+ + NVIFGGRLA+YKY+DM I+ +L+ Sbjct: 303 KEYEEGDEPYYPINDARNNELYAKYKELADEKSNVIFGGRLAQYKYFDMHNIIAEALECV 362 Query: 360 RKELK 364 + Sbjct: 363 NAHFR 367 >B0BR59.1 B0BR59_ACTPJ UDP-galactopyranose mutase Length = 365 Score = 528 bits (1359), Expect = e-148, Method: Compositional matrix adjust. Identities = 243/362 (67%), Positives = 302/362 (83%), Gaps = 2/362 (0%) Query: 1 MKYDYLIVGAGPYGAIFAHEAMKCNKTCLVIDKRDHIGGNIYTEQVEGINVHKYGAHIFH 60 MKYDYLIVGAG +G+IFA EA K K CLVI+KRDHIGGN YT+ VEGINVHKYGAHIFH Sbjct: 1 MKYDYLIVGAGLFGSIFAREATKRGKKCLVIEKRDHIGGNCYTQNVEGINVHKYGAHIFH 60 Query: 61 TNDKEVWEYVNRFATFNRYTNSPIANFNGEIYNLPFNMNTFYRLWGVSDPTEAEKIIETQ 120 T++K VW+Y+ +FA FNR+TNSP+A + E+Y+LPFNM TF ++WGV P EAE I+ Q Sbjct: 61 TSNKVVWDYIQQFAEFNRFTNSPVARYKDELYSLPFNMLTFNKMWGVITPQEAEAKIKEQ 120 Query: 121 RLK--CEEPQNLEEQALSLVGRDIYEKLIKGYTEKQWGRDCKDLPAFIIKRLPVRFTWDN 178 K +P+NLEEQA+SLVGRDIYEKLIKGYTEKQWGR C +LPAFIIKRLPVR+T+DN Sbjct: 121 IAKENITDPKNLEEQAISLVGRDIYEKLIKGYTEKQWGRKCTELPAFIIKRLPVRYTYDN 180 Query: 179 NYFNDQYQGIPVGGYTGIIKKLLEGSEVRLNTDYFAQRDYFDHIATKTIYTGMLDEFFNY 238 NYF D YQGIP+GGYTGI +++LEG EV+L D+FA+R++++ +A K ++TGM+DE+F Y Sbjct: 181 NYFYDTYQGIPIGGYTGIFERMLEGIEVKLGVDFFAEREHYESLAEKIVFTGMIDEYFGY 240 Query: 239 QFGPLEYRTLRFDSEILDQPNFQGNAVVNYTDKETPFTRIIEHKHFEFGTQPKTVVTREY 298 QFG LEYR+LRFD+E+L+ PN+QGNAVVNYT+ E P+TRIIEHKHFE+GTQPKTV+TRE+ Sbjct: 241 QFGKLEYRSLRFDNEVLNIPNYQGNAVVNYTEAEVPYTRIIEHKHFEYGTQPKTVITREH 300 Query: 299 SKEYENGDEPYYPVNDLKNSARYLSYKELAEGEENVIFGGRLAEYKYYDMWQIVRNSLDA 358 SKEYE GDEPYYP+ND +N+ Y YK LA+ NVIFGGRLA+YKY+DM I+ +L+ Sbjct: 301 SKEYEEGDEPYYPINDARNNELYAKYKALADATPNVIFGGRLAQYKYFDMHNIIAEALEC 360 Query: 359 AR 360 + Sbjct: 361 VK 362 >A8SAW9.1 A8SAW9_9FIRM Putative uncharacterized protein Length = 367 Score = 527 bits (1357), Expect = e-148, Method: Compositional matrix adjust. Identities = 250/364 (68%), Positives = 298/364 (81%), Gaps = 2/364 (0%) Query: 2 KYDYLIVGAGPYGAIFAHEAMKCNKTCLVIDKRDHIGGNIYTEQVEGINVHKYGAHIFHT 61 +YDYLIVGAG +GA+FAHEA K K CLVIDKRDHI GNIYTE VEGINVH+YGAHIFHT Sbjct: 3 QYDYLIVGAGLFGAVFAHEAKKAGKKCLVIDKRDHIAGNIYTENVEGINVHRYGAHIFHT 62 Query: 62 NDKEVWEYVNRFATFNRYTNSPIANFNGEIYNLPFNMNTFYRLWGVSDPTEAEKIIETQR 121 N+K VW+YVN+FA FNRYTNSP+AN++G+IYNLPFNMNTF ++WGV P EA+ IE Q+ Sbjct: 63 NNKAVWQYVNQFAEFNRYTNSPVANYHGQIYNLPFNMNTFNKMWGVVTPAEAKAKIEEQK 122 Query: 122 LKC--EEPQNLEEQALSLVGRDIYEKLIKGYTEKQWGRDCKDLPAFIIKRLPVRFTWDNN 179 +PQNLEEQA+SLVG DIYEKLIKGYT KQWGR C +LPAFIIKRLPVRFT+D+N Sbjct: 123 AAAGITDPQNLEEQAISLVGTDIYEKLIKGYTGKQWGRPCTELPAFIIKRLPVRFTYDDN 182 Query: 180 YFNDQYQGIPVGGYTGIIKKLLEGSEVRLNTDYFAQRDYFDHIATKTIYTGMLDEFFNYQ 239 YFN YQGIP GGYT +++K+L +EVRLN DY A + D +A K +YTG +D +F Y+ Sbjct: 183 YFNALYQGIPNGGYTAMVEKMLADTEVRLNVDYLADKAALDALAEKVVYTGPVDAYFGYR 242 Query: 240 FGPLEYRTLRFDSEILDQPNFQGNAVVNYTDKETPFTRIIEHKHFEFGTQPKTVVTREYS 299 G L+YR++RF++E+LD N+QGNAVVNYTD ETP+TRIIEHKHFEFGTQPKTV++REYS Sbjct: 243 LGALQYRSVRFETEVLDTDNYQGNAVVNYTDAETPYTRIIEHKHFEFGTQPKTVISREYS 302 Query: 300 KEYENGDEPYYPVNDLKNSARYLSYKELAEGEENVIFGGRLAEYKYYDMWQIVRNSLDAA 359 E++ GDEPYYPVND KN A Y YK LA+ E VIFGGRL EYKYYDM +++ +LD A Sbjct: 303 AEWKKGDEPYYPVNDEKNGALYAQYKALADAEPGVIFGGRLGEYKYYDMDKVIEVALDVA 362 Query: 360 RKEL 363 KEL Sbjct: 363 AKEL 366 >A6VMJ4.1 A6VMJ4_ACTSZ UDP-galactopyranose mutase EC=5.4.99.9 Length = 367 Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust. Identities = 240/361 (66%), Positives = 302/361 (83%), Gaps = 2/361 (0%) Query: 2 KYDYLIVGAGPYGAIFAHEAMKCNKTCLVIDKRDHIGGNIYTEQVEGINVHKYGAHIFHT 61 KYDYLIVGAG +G+IFAHEA K K CLVI+KRDHIGGN YT+ +EGINVHKYGAHIFHT Sbjct: 3 KYDYLIVGAGLFGSIFAHEATKRGKKCLVIEKRDHIGGNCYTQNIEGINVHKYGAHIFHT 62 Query: 62 NDKEVWEYVNRFATFNRYTNSPIANFNGEIYNLPFNMNTFYRLWGVSDPTEAEKIIETQR 121 ++K VW+Y+ +FA FNR+TNSP+A + E+Y+LPFNM TF ++WGV P EAE I+ Q Sbjct: 63 SNKVVWDYIQQFAEFNRFTNSPVARYKDELYSLPFNMLTFNKMWGVITPQEAEAKIKAQI 122 Query: 122 LK--CEEPQNLEEQALSLVGRDIYEKLIKGYTEKQWGRDCKDLPAFIIKRLPVRFTWDNN 179 + +PQNLEEQA+SLVGRDIYEKLIKGYTEKQWGR C +LPAFIIKRLPVR+T+DNN Sbjct: 123 AQENITDPQNLEEQAISLVGRDIYEKLIKGYTEKQWGRKCTELPAFIIKRLPVRYTYDNN 182 Query: 180 YFNDQYQGIPVGGYTGIIKKLLEGSEVRLNTDYFAQRDYFDHIATKTIYTGMLDEFFNYQ 239 YF D YQGIP+GGYT I +++L+G EV+L D+FA+R++++++A K ++TGM+DE+F YQ Sbjct: 183 YFYDTYQGIPIGGYTAIFERMLDGIEVKLGVDFFAEREHYENLAEKIVFTGMIDEYFGYQ 242 Query: 240 FGPLEYRTLRFDSEILDQPNFQGNAVVNYTDKETPFTRIIEHKHFEFGTQPKTVVTREYS 299 FG LEYR+LRFD+E+LD PN+QGNAVVNYT+ E P+TRIIEHKHFE+GTQ KTV+TRE+S Sbjct: 243 FGKLEYRSLRFDNEVLDMPNYQGNAVVNYTEAEVPYTRIIEHKHFEYGTQSKTVITREHS 302 Query: 300 KEYENGDEPYYPVNDLKNSARYLSYKELAEGEENVIFGGRLAEYKYYDMWQIVRNSLDAA 359 KEYE GDEPYYP+ND +N+ Y YK LA+ + NVIFGGRLA+YKY+DM I+ +L+ Sbjct: 303 KEYEEGDEPYYPINDGRNNELYAKYKALADEKSNVIFGGRLAQYKYFDMHNIIAEALECV 362 Query: 360 R 360 + Sbjct: 363 K 363 >B0N1W0.1 B0N1W0_9FIRM Putative uncharacterized protein Length = 368 Score = 523 bits (1348), Expect = e-147, Method: Compositional matrix adjust. Identities = 240/364 (65%), Positives = 305/364 (83%), Gaps = 2/364 (0%) Query: 2 KYDYLIVGAGPYGAIFAHEAMKCNKTCLVIDKRDHIGGNIYTEQVEGINVHKYGAHIFHT 61 KYDYL+VG+G +G+IFA+EA K K CLVIDKR+H+GGNIYTE +EGINVHKYGAHIFHT Sbjct: 3 KYDYLVVGSGLFGSIFAYEANKKGKKCLVIDKRNHVGGNIYTENIEGINVHKYGAHIFHT 62 Query: 62 NDKEVWEYVNRFATFNRYTNSPIANFNGEIYNLPFNMNTFYRLWGVSDPTEAEKIIETQR 121 ++KEVW+Y+N+FA FNRYTNSP+A + E+YN+PFNMNTF RLW + P EA++IIE Q+ Sbjct: 63 SNKEVWDYINQFAIFNRYTNSPVAFYKDEVYNMPFNMNTFSRLWNIKTPKEAKEIIEKQK 122 Query: 122 LKCE--EPQNLEEQALSLVGRDIYEKLIKGYTEKQWGRDCKDLPAFIIKRLPVRFTWDNN 179 + EP NLEEQA+SLVG+DIYEKL+KGYT+KQWGR+C DLPAFIIKRLPVRFT+DNN Sbjct: 123 KESGIIEPCNLEEQAISLVGKDIYEKLVKGYTQKQWGRECTDLPAFIIKRLPVRFTYDNN 182 Query: 180 YFNDQYQGIPVGGYTGIIKKLLEGSEVRLNTDYFAQRDYFDHIATKTIYTGMLDEFFNYQ 239 YFND YQGIP+GGYT II+K+L+G +VRLN DYF ++ D +A K ++TGM+D+F++Y+ Sbjct: 183 YFNDLYQGIPMGGYTKIIEKMLDGIDVRLNCDYFKNKEELDGLANKILFTGMIDQFYDYK 242 Query: 240 FGPLEYRTLRFDSEILDQPNFQGNAVVNYTDKETPFTRIIEHKHFEFGTQPKTVVTREYS 299 FG LEYR+L+F++E+LD+ N+QGNAVVNYT+ E P+TRIIEHKHFE+GTQ KTV+TREY Sbjct: 243 FGTLEYRSLKFETEVLDEENYQGNAVVNYTEYEIPYTRIIEHKHFEYGTQTKTVITREYP 302 Query: 300 KEYENGDEPYYPVNDLKNSARYLSYKELAEGEENVIFGGRLAEYKYYDMWQIVRNSLDAA 359 + GDEPYYP+ND KN+A Y Y++LA+ E N+IFGGRL +YKYYDM ++ +L Sbjct: 303 ANWSKGDEPYYPMNDDKNNALYGKYEQLAKQESNIIFGGRLGQYKYYDMHNVIAEALKCV 362 Query: 360 RKEL 363 KEL Sbjct: 363 AKEL 366 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.139 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,517,884,989 Number of extensions: 115937481 Number of successful extensions: 263218 Number of sequences better than 1.0e-05: 489 Number of HSP's gapped: 261571 Number of HSP's successfully gapped: 491 Length of query: 373 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 236 Effective length of database: 1,770,017,148 Effective search space: 417724046928 Effective search space used: 417724046928 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)