BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0515.0016.p (835 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DE94.1 B1DE94_9BACL Protein translocase subunit secA 1299 0.0 C0Z6T7.1 SECA_BREBN Protein translocase subunit secA 1122 0.0 B7GL68.1 B7GL68_ANOFW Protein translocase subunit secA 1105 0.0 A7GUW2.1 A7GUW2_BACCN Protein translocase subunit secA 1102 0.0 Q9K6W8.1 SECA_BACHD Protein translocase subunit secA 1092 0.0 >B1DE94.1 B1DE94_9BACL Protein translocase subunit secA Length = 835 Score = 1299 bits (3362), Expect = 0.0, Method: Compositional matrix adjust. Identities = 621/832 (74%), Positives = 703/832 (84%) Query: 1 MLGLVKKIFGDTNERDVKRLMKTVDVINGLEPDFVSLSDEELRAKTAEFRARIEKGETLE 60 MLGLVKKIFGD NER+VKRL +TV+ INGLE LSD+ELR KT EF+AR+EKGE ++ Sbjct: 1 MLGLVKKIFGDANEREVKRLTRTVEEINGLESKISPLSDDELRNKTEEFKARLEKGEEID 60 Query: 61 ELLPEAFATVREASKRTLGMRHFDVQLVGGMALHEGRISEMKTGEGKTLVGTLPVYLNAL 120 +LPEAFA VREASKRTLGMRHFDVQL+GGM LHEG+I+EM+TGEGKTLV TLP YLNAL Sbjct: 61 SILPEAFAVVREASKRTLGMRHFDVQLMGGMVLHEGKIAEMRTGEGKTLVATLPTYLNAL 120 Query: 121 LGKGVHVVTVNDYLAQRDSAQMGQIYNFLGMTVGVNLNGMDHADKQEAYACDITYGTNNE 180 GKGVHV+TVNDYLA RDS M ++YNFLG+TVG NL+G+ H +KQEAYACDITYGTNNE Sbjct: 121 QGKGVHVITVNDYLASRDSQIMAELYNFLGLTVGCNLHGLTHEEKQEAYACDITYGTNNE 180 Query: 181 FGFDYLRDNMVLYKEQMVQRPLYFCIIDEVDSILIDEARTPLIISGQAEKSTELYYAADR 240 FGFDYLRDNMVLYKEQMVQRPLY+ IIDEVDSIL+DEARTPLIISGQA+KSTELYYAADR Sbjct: 181 FGFDYLRDNMVLYKEQMVQRPLYYAIIDEVDSILVDEARTPLIISGQAQKSTELYYAADR 240 Query: 241 FVKRLTAEEDYTVDIKVKSVALTEKGVATAERAFGVENLYDHSNVTLNHHIVQALKANVI 300 FV RL EEDYTVDIK+++V LTE GV AE+AFG+ENL+DH+NVTLNHH+ QALKA+VI Sbjct: 241 FVTRLKQEEDYTVDIKLRNVTLTEAGVDKAEKAFGIENLFDHANVTLNHHVQQALKAHVI 300 Query: 301 MRRXXXXXXXXXXXXXXXXFTGRLMAGRRYSDGLHQAIEAKEEIQVQNESMTLATITFQN 360 MRR FTGRLMAGRRYSDGLHQAIEAKE+++VQNESMTLATITFQN Sbjct: 301 MRRDVDYVVNEDEVVIVDEFTGRLMAGRRYSDGLHQAIEAKEQLKVQNESMTLATITFQN 360 Query: 361 YFRMYRKLGGMTGTAKTEEEEFKKIYGLEVLQVPTNKPNQRVDMPDVVYKSENGKFNAVV 420 YFRMYRKL GMTGTAKTEEEEFK+IYGLEV+Q+PTN+ R DM DVVYKSENGKF AVV Sbjct: 361 YFRMYRKLSGMTGTAKTEEEEFKRIYGLEVIQIPTNRSLIRKDMQDVVYKSENGKFKAVV 420 Query: 421 EEIVERHKKNQPVLVGTVSIENSERVSEMLKRKGVRHQVLNXXXXXXXXXXXXXXGQPGT 480 EEIVERHK NQPVLVGT+SIENSER++EMLK++GV H+VLN GQ G+ Sbjct: 421 EEIVERHKNNQPVLVGTISIENSERLAEMLKKRGVAHKVLNAKFHAEEAEIISRAGQAGS 480 Query: 481 VTIATNMAGRGTDIVLGEGVTDLGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYL 540 VTIATNMAGRGTDI+LGEGV D+GGLHIIGTERHESRRIDNQLRGRAGRQGDPGS+QFYL Sbjct: 481 VTIATNMAGRGTDILLGEGVHDVGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFYL 540 Query: 541 SLGDELMKRFGADNVLNMMDRLGFEEDQPIESRMITRAVESAQKRVEGNNFDIRKVVLQY 600 SL DELM+RFGA+N++ MMDRLG EEDQPIESR+ITRAVESAQKRVEG+NFD RKVVLQY Sbjct: 541 SLEDELMRRFGAENIMGMMDRLGLEEDQPIESRLITRAVESAQKRVEGSNFDTRKVVLQY 600 Query: 601 DDVMNQQREIIYKQRREILESDNIKDIVVEMIKPVIDRIVNAHCSDDIPENWELQEVADY 660 DDVMNQQRE+IYKQRR++L S+NI++IV+EMI PVI+ +V AH DIPE WELQE+ADY Sbjct: 601 DDVMNQQREVIYKQRRDVLYSENIREIVMEMIVPVIEHVVEAHTEGDIPEEWELQEIADY 660 Query: 661 VNSKLLEEGQLTRDDLWGKEVEELIEYIFNLVLEKYAAREERLGSELVREFEKVIVLRSV 720 NS LL + T+DDLWGKE E++IE I V+ Y RE LG+E +REFEKV+VLR+V Sbjct: 661 ANSNLLPDETFTKDDLWGKEKEDIIELIKGKVVAYYDEREAELGAETMREFEKVVVLRAV 720 Query: 721 DSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFNAMTATIQEEVATYIMKAHI 780 DSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMF M +IQEEVA YIMKA + Sbjct: 721 DSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFKEMIYSIQEEVAKYIMKARV 780 Query: 781 ETNQERQSVVEENKISTNGEPAEKQPVHVQAAIGRNDPCPCGSGKKYKNCHG 832 E+N ERQ V + + + AEK+P + GRND CPCGSGKKYK CHG Sbjct: 781 ESNLERQEVAQGQTTTNSPAEAEKRPAKREERTGRNDLCPCGSGKKYKMCHG 832 >C0Z6T7.1 SECA_BREBN Protein translocase subunit secA Length = 839 Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust. Identities = 546/825 (66%), Positives = 651/825 (78%), Gaps = 9/825 (1%) Query: 1 MLGLVKKIFGDTNERDVKRLMKTVDVINGLEPDFVSLSDEELRAKTAEFRARIEKGETLE 60 MLGLVKKIFGD+NER+VK++ K V+ IN LEP +LSD++LR KTAEF+AR+ GE L+ Sbjct: 1 MLGLVKKIFGDSNEREVKKMFKRVESINALEPTIKALSDDQLREKTAEFKARLANGEELD 60 Query: 61 ELLPEAFATVREASKRTLGMRHFDVQLVGGMALHEGRISEMKTGEGKTLVGTLPVYLNAL 120 ++L EAFA VREAS R LGMRHFDVQ++GGM L EGRISEMKTGEGKTLV TL YLNAL Sbjct: 61 KILNEAFAVVREASIRVLGMRHFDVQMIGGMVLQEGRISEMKTGEGKTLVATLATYLNAL 120 Query: 121 LGKGVHVVTVNDYLAQRDSAQMGQIYNFLGMTVGVNLNGMDHADKQEAYACDITYGTNNE 180 +GKGVHVVTVN+YLA+RDS+ MG++YNFLG+TVG+N NG++ +K+EAYACDITYGTNNE Sbjct: 121 MGKGVHVVTVNEYLAERDSSIMGKLYNFLGLTVGLNKNGLNPEEKREAYACDITYGTNNE 180 Query: 181 FGFDYLRDNMVLYKEQMVQRPLYFCIIDEVDSILIDEARTPLIISGQAEKSTELYYAADR 240 FGFDYLRDNMVLYKEQMVQRPL+F IIDEVDSILIDEARTPLIISG A KSTELYY Sbjct: 181 FGFDYLRDNMVLYKEQMVQRPLFFAIIDEVDSILIDEARTPLIISGSANKSTELYYICSH 240 Query: 241 FVKRLTAEEDYTVDIKVKSVALTEKGVATAERAFGVENLYDHSNVTLNHHIVQALKANVI 300 FVKRL E+D+T+D K+K V LT+ GV+ E+AF ++NLYD +++TLNHHI ALKA V+ Sbjct: 241 FVKRLEEEKDFTIDEKLKIVNLTDDGVSKVEQAFNIDNLYDTAHITLNHHITAALKAQVL 300 Query: 301 MRRXXXXXXXXXXXXXXXXFTGRLMAGRRYSDGLHQAIEAKEEIQVQNESMTLATITFQN 360 +R FTGRLM GRRYSDGLHQAIEAKE ++VQ+ESMTLATIT QN Sbjct: 301 FKRDVDYVVQEGEVVIVDEFTGRLMVGRRYSDGLHQAIEAKEGLRVQSESMTLATITLQN 360 Query: 361 YFRMYRKLGGMTGTAKTEEEEFKKIYGLEVLQVPTNKPNQRVDMPDVVYKSENGKFNAVV 420 YFRMY KL GMTGTAKTEEEEFKKIYGL+V+ +PTNKP QRVD PD+V+K+E K+ AVV Sbjct: 361 YFRMYEKLAGMTGTAKTEEEEFKKIYGLDVVVIPTNKPVQRVDSPDLVFKTEAAKYRAVV 420 Query: 421 EEIVERHKKNQPVLVGTVSIENSERVSEMLKRKGVRHQVLNXXXXXXXXXXXXXXGQPGT 480 +IVERHKK QP+LVGT+SIENSER+S+MLK+KGV H VLN G G Sbjct: 421 NDIVERHKKGQPILVGTISIENSERLSQMLKQKGVPHNVLNAKQHEREAEIVARAGVYGA 480 Query: 481 VTIATNMAGRGTDIVLGEGVTDLGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYL 540 VTIATNMAGRGTDI LGEGV +LGGLHIIGTERHESRRIDNQLRGRAGRQGDPGS+QF+L Sbjct: 481 VTIATNMAGRGTDIQLGEGVAELGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSQFFL 540 Query: 541 SLGDELMKRFGADNVLNMMDRLGFEEDQPIESRMITRAVESAQKRVEGNNFDIRKVVLQY 600 S+ DELM+RFGADN++NMMDRLG EED PIESR++TRAVESAQKRVEG+NFD RK VLQY Sbjct: 541 SMQDELMRRFGADNIMNMMDRLGMEEDMPIESRLVTRAVESAQKRVEGSNFDARKGVLQY 600 Query: 601 DDVMNQQREIIYKQRREILESDNIKDIVVEMIKPVIDRIVNAHC-SDDIPENWELQEVAD 659 DDVMNQQR ++YKQR++ILE +N+ D+ + MI V++R V+ HC +++PE+W+LQ +AD Sbjct: 601 DDVMNQQRLVVYKQRKDILEHENLSDVALNMIYAVMERAVSLHCPKEEVPEDWDLQALAD 660 Query: 660 YVNSKLLEEGQLTRDDLWGKEVEELIEYIFNLVLEKYAAREERLGSELVREFEKVIVLRS 719 N+ L E +T L G E EE++E + V ++Y REE +G E +REFEKV++LR+ Sbjct: 661 AANNGFLYEETITAKMLKGMEAEEILELLKAEVDKQYKQREEEIG-ESIREFEKVVILRA 719 Query: 720 VDSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFNAMTATIQEEVATYIMKAH 779 VDSKWMDHIDAMDQLRQGIHLRAY DPLREYQFEG+EM+ M A +QEEVA YIMKA Sbjct: 720 VDSKWMDHIDAMDQLRQGIHLRAYAQNDPLREYQFEGYEMYQGMLAAVQEEVAMYIMKAE 779 Query: 780 IETNQERQSVVEENKISTNGEPAEKQPVHVQAAIGRNDPCPCGSG 824 + N ERQ V+ G+ + + R DP G Sbjct: 780 VSQNLERQDVI-------RGQGIDMDNLQTSGPSDRPDPETSGDA 817 >B7GL68.1 B7GL68_ANOFW Protein translocase subunit secA Length = 856 Score = 1105 bits (2858), Expect = 0.0, Method: Compositional matrix adjust. Identities = 536/835 (64%), Positives = 658/835 (78%), Gaps = 3/835 (0%) Query: 1 MLGLVKKIFGDTNERDVKRLMKTVDVINGLEPDFVSLSDEELRAKTAEFRARIEKGETLE 60 MLG+ KK+F D N+R + RL K + I+ L LSD+ELR KT EF+AR+EKGETL+ Sbjct: 23 MLGMFKKVF-DPNKRQIARLEKIANEIDALGSQMAQLSDDELRQKTEEFKARLEKGETLD 81 Query: 61 ELLPEAFATVREASKRTLGMRHFDVQLVGGMALHEGRISEMKTGEGKTLVGTLPVYLNAL 120 +LL EAFA VREA+KR LGM + VQL+GG+ALHEG I+EMKTGEGKTL T+PVYLNAL Sbjct: 82 DLLVEAFAVVREAAKRVLGMYPYKVQLMGGIALHEGNIAEMKTGEGKTLTATMPVYLNAL 141 Query: 121 LGKGVHVVTVNDYLAQRDSAQMGQIYNFLGMTVGVNLNGMDHADKQEAYACDITYGTNNE 180 GKGVHVVTVN+YLA RD+ +MG++Y FLG++VG+NLN M +KQ AY DITYGTNNE Sbjct: 142 TGKGVHVVTVNEYLASRDANEMGRLYQFLGLSVGLNLNSMSREEKQAAYHADITYGTNNE 201 Query: 181 FGFDYLRDNMVLYKEQMVQRPLYFCIIDEVDSILIDEARTPLIISGQAEKSTELYYAADR 240 FGFDYLRDNMVLYKE MVQRPL++ IIDEVDSILIDEARTPLIISG A+KST+LY A+ Sbjct: 202 FGFDYLRDNMVLYKEHMVQRPLHYAIIDEVDSILIDEARTPLIISGTAQKSTKLYIQANA 261 Query: 241 FVKRLTAEEDYTVDIKVKSVALTEKGVATAERAFGVENLYDHSNVTLNHHIVQALKANVI 300 FV+ L + DYT D K KSV LTE+G+ AERAFG++NL+D +VTLNHHI QAL+A+V+ Sbjct: 262 FVRTLKRDVDYTYDEKTKSVQLTEEGMNKAERAFGIDNLFDLKHVTLNHHINQALRAHVV 321 Query: 301 MRRXXXXXXXXXXXXXXXXFTGRLMAGRRYSDGLHQAIEAKEEIQVQNESMTLATITFQN 360 M+R FTGRLM GRRYSDGLHQAIEAKE +++QNESMTLATITFQN Sbjct: 322 MQRDVDYVVEDGKIVIVDPFTGRLMRGRRYSDGLHQAIEAKEGLEIQNESMTLATITFQN 381 Query: 361 YFRMYRKLGGMTGTAKTEEEEFKKIYGLEVLQVPTNKPNQRVDMPDVVYKSENGKFNAVV 420 YFRMY KL GMTGTAKTEEEEF+ IY ++V+ +PTNKP R D PD++Y++ GKF AVV Sbjct: 382 YFRMYEKLAGMTGTAKTEEEEFRNIYNMQVVVIPTNKPVIRDDRPDLIYRTMEGKFRAVV 441 Query: 421 EEIVERHKKNQPVLVGTVSIENSERVSEMLKRKGVRHQVLNXXXXXXXXXXXXXXGQPGT 480 E+I ERH K QPVLVGTVSIE SE +S ML ++G+RH VLN GQ G Sbjct: 442 EDIAERHAKGQPVLVGTVSIETSELLSSMLTKRGIRHNVLNAKNHAKEAEIIAQAGQKGA 501 Query: 481 VTIATNMAGRGTDIVLGEGVTDLGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYL 540 VTIATNMAGRGTDI LGEGV +LGGL +IGTERHESRRIDNQLRGR+GRQGDPG +QFYL Sbjct: 502 VTIATNMAGRGTDIKLGEGVRELGGLAVIGTERHESRRIDNQLRGRSGRQGDPGVSQFYL 561 Query: 541 SLGDELMKRFGADNVLNMMDRLGFEEDQPIESRMITRAVESAQKRVEGNNFDIRKVVLQY 600 SL DELM+RFG++N++ MMDRLG ++ QPI+S+++++AVESAQKRVEGNNFD RK +LQY Sbjct: 562 SLEDELMRRFGSENMMAMMDRLGMDDSQPIQSKIVSKAVESAQKRVEGNNFDARKQLLQY 621 Query: 601 DDVMNQQREIIYKQRREILESDNIKDIVVEMIKPVIDRIVNAHCSD-DIPENWELQEVAD 659 DDV+ +QREIIY+QR ++L+S+N++DIV +MI+ VI+R+V H D ++PE W +Q + D Sbjct: 622 DDVLREQREIIYRQRFQVLDSENLRDIVEKMIQSVIERVVRMHTPDEEMPEEWNVQAIVD 681 Query: 660 YVNSKLLEEGQLTRDDLWGKEVEELIEYIFNLVLEKYAAREERLGSELVREFEKVIVLRS 719 YV + LL EG +T +DL GK+ EE+IE I+N V +Y +E R+ +E +REFE+VIVLR+ Sbjct: 682 YVQANLLPEGDVTVNDLRGKDPEEMIELIWNNVRARYDEKESRIPAEQMREFERVIVLRA 741 Query: 720 VDSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFNAMTATIQEEVATYIMKAH 779 VD KWM+HIDAM+QLRQGIHLRAYG DPLREYQ EG+ MF AM A+I+EEVA YIMKA Sbjct: 742 VDMKWMEHIDAMEQLRQGIHLRAYGQIDPLREYQMEGYAMFEAMIASIEEEVARYIMKAE 801 Query: 780 IETNQERQSVVEENKISTN-GEPAEKQPVHVQAAIGRNDPCPCGSGKKYKNCHGQ 833 IE+N ERQ V + + GE +++PV +GRNDPCPCGSGKKYK+C G+ Sbjct: 802 IESNLERQEVAKGEAVHPKEGEEVKRKPVKKAVEVGRNDPCPCGSGKKYKHCCGR 856 >A7GUW2.1 A7GUW2_BACCN Protein translocase subunit secA Length = 836 Score = 1102 bits (2849), Expect = 0.0, Method: Compositional matrix adjust. Identities = 531/834 (63%), Positives = 652/834 (78%), Gaps = 3/834 (0%) Query: 1 MLGLVKKIFGDTNERDVKRLMKTVDVINGLEPDFVSLSDEELRAKTAEFRARIEKGETLE 60 M+G++KK+F D N+R +KR+ K VD I LEP L+DE+L+ KTAEF+ R+ KGET++ Sbjct: 1 MIGILKKVF-DANQRQIKRMQKMVDQIESLEPTIKPLTDEQLKGKTAEFKERLAKGETVD 59 Query: 61 ELLPEAFATVREASKRTLGMRHFDVQLVGGMALHEGRISEMKTGEGKTLVGTLPVYLNAL 120 +LLPEAFA VREA+ R LGMR + VQL+GG+ALHEG I+EMKTGEGKTL TLPVYLNAL Sbjct: 60 DLLPEAFAVVREAAHRVLGMRPYPVQLMGGIALHEGNIAEMKTGEGKTLTSTLPVYLNAL 119 Query: 121 LGKGVHVVTVNDYLAQRDSAQMGQIYNFLGMTVGVNLNGMDHADKQEAYACDITYGTNNE 180 GKGVHVVTVN+YLAQRD+++MG+++ FLG+TVG+NLN M +KQ AYA DITY TNNE Sbjct: 120 AGKGVHVVTVNEYLAQRDASEMGKLHEFLGLTVGINLNSMSREEKQAAYAADITYSTNNE 179 Query: 181 FGFDYLRDNMVLYKEQMVQRPLYFCIIDEVDSILIDEARTPLIISGQAEKSTELYYAADR 240 GFDYLRDNMVLYKEQ VQRPL+F IIDEVDSILIDEARTPLIISGQA+KSTELY A+ Sbjct: 180 LGFDYLRDNMVLYKEQRVQRPLHFAIIDEVDSILIDEARTPLIISGQAQKSTELYMFANA 239 Query: 241 FVKRLTAEEDYTVDIKVKSVALTEKGVATAERAFGVENLYDHSNVTLNHHIVQALKANVI 300 FV+ L E+DYT D+K K+V LTE G+ AE+AF +ENL+D +V L HHI QAL+A+V+ Sbjct: 240 FVRTLENEKDYTFDVKTKNVMLTEDGITKAEKAFHIENLFDLKHVALLHHINQALRAHVV 299 Query: 301 MRRXXXXXXXXXXXXXXXXFTGRLMAGRRYSDGLHQAIEAKEEIQVQNESMTLATITFQN 360 M R FTGRLM GRRYS+GLHQAIEAKE +++QNESMTLATITFQN Sbjct: 300 MHRDTDYVVQEGEIVIVDQFTGRLMKGRRYSEGLHQAIEAKEGVEIQNESMTLATITFQN 359 Query: 361 YFRMYRKLGGMTGTAKTEEEEFKKIYGLEVLQVPTNKPNQRVDMPDVVYKSENGKFNAVV 420 YFRMY+KL GMTGTAKTEEEEF+ IY + V+ +PTN+P R D D+++K+ GKFNAVV Sbjct: 360 YFRMYKKLSGMTGTAKTEEEEFRNIYNMNVIVIPTNRPVIRDDRADLIFKTMEGKFNAVV 419 Query: 421 EEIVERHKKNQPVLVGTVSIENSERVSEMLKRKGVRHQVLNXXXXXXXXXXXXXXGQPGT 480 ++IV+RHK QPVLVGTV+IE SE +S+ML RKGVRH +LN G G Sbjct: 420 QDIVKRHKNGQPVLVGTVAIETSELISKMLTRKGVRHNILNAKNHAREADIIAEAGVKGA 479 Query: 481 VTIATNMAGRGTDIVLGEGVTDLGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYL 540 VTIATNMAGRGTDI LGEGV ++GGL +IGTERHESRRIDNQLRGRAGRQGDPG TQFYL Sbjct: 480 VTIATNMAGRGTDIKLGEGVKEVGGLAVIGTERHESRRIDNQLRGRAGRQGDPGVTQFYL 539 Query: 541 SLGDELMKRFGADNVLNMMDRLGFEEDQPIESRMITRAVESAQKRVEGNNFDIRKVVLQY 600 S+ DELM+RFG+DN+ MMDRLG ++ QPIES+M++RAVESAQKRVEGNN+D RK +LQY Sbjct: 540 SMEDELMRRFGSDNMKTMMDRLGMDDSQPIESKMVSRAVESAQKRVEGNNYDARKQLLQY 599 Query: 601 DDVMNQQREIIYKQRREILESDNIKDIVVEMIKPVIDRIVNAHCSDDIPENWELQEVADY 660 DDV+ QQRE+IYKQR+E++ES+N++ I+ M+K +DR + H +++ E+W ++ + DY Sbjct: 600 DDVLRQQREVIYKQRQEVMESENLRSIIEGMMKSTVDRAIALHTQEEVEEDWNIKGLIDY 659 Query: 661 VNSKLLEEGQLTRDDLWGKEVEELIEYIFNLVLEKYAAREERLGSELVREFEKVIVLRSV 720 +N+ LLEEG + ++L EE+ E I VLE+Y A+E+ L E +REFEKV+V R V Sbjct: 660 LNTTLLEEGDIKEEELRRLAPEEMSEPIMAKVLERYDAKEKLLPEEQMREFEKVVVFRVV 719 Query: 721 DSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFNAMTATIQEEVATYIMKAHI 780 D+KWMDHIDAMDQLR+GIHLRAYG DPLREYQ EGF MF AM A+I+EE++ YIMKA I Sbjct: 720 DTKWMDHIDAMDQLREGIHLRAYGQIDPLREYQMEGFAMFEAMIASIEEEISRYIMKAEI 779 Query: 781 ETNQERQSVVEENKIST--NGEPAEKQPVHVQAAIGRNDPCPCGSGKKYKNCHG 832 E N ERQ V + I +GE A+K+PV + RND CPCGSGKKYKNC G Sbjct: 780 EQNLERQEVAQGEAIHPVDSGEEAKKKPVVKGEQVRRNDLCPCGSGKKYKNCCG 833 >Q9K6W8.1 SECA_BACHD Protein translocase subunit secA Length = 838 Score = 1092 bits (2823), Expect = 0.0, Method: Compositional matrix adjust. Identities = 525/838 (62%), Positives = 654/838 (78%), Gaps = 5/838 (0%) Query: 1 MLGLVKKIFGDTNERDVKRLMKTVDVINGLEPDFVSLSDEELRAKTAEFRARIEKGETLE 60 MLGL+KK+ GD ++R +K+ K D + L + SLSD+ LR KT EF+ R + GE+L+ Sbjct: 1 MLGLLKKVVGDPSQRQLKKNQKIADQVEALSDEMKSLSDDGLRQKTEEFKKRYKNGESLD 60 Query: 61 ELLPEAFATVREASKRTLGMRHFDVQLVGGMALHEGRISEMKTGEGKTLVGTLPVYLNAL 120 +LLPEA+A VREA+ R L M + VQ++G +ALH+G I+EMKTGEGKTLVGT+PVYLNAL Sbjct: 61 DLLPEAYAVVREAATRVLNMTPYPVQILGAIALHQGNIAEMKTGEGKTLVGTMPVYLNAL 120 Query: 121 LGKGVHVVTVNDYLAQRDSAQMGQIYNFLGMTVGVNLNGMDHADKQEAYACDITYGTNNE 180 GKGVHVVTVNDYLA+RDS QMG ++ FLG+TVG+N+ G+ +K+EAY DITYGTNNE Sbjct: 121 AGKGVHVVTVNDYLARRDSEQMGAMFEFLGLTVGLNVPGLSKEEKKEAYQADITYGTNNE 180 Query: 181 FGFDYLRDNMVLYKEQMVQRPLYFCIIDEVDSILIDEARTPLIISGQAEKSTELYYAADR 240 FGFDYLRDNMVLYKEQMVQR L F ++DEVDSILIDEARTPLIISG E+ST+LY A+ Sbjct: 181 FGFDYLRDNMVLYKEQMVQRSLNFALVDEVDSILIDEARTPLIISGSVERSTKLYSQANS 240 Query: 241 FVKRLTAEEDYTVDIKVKSVALTEKGVATAERAFGVENLYDHSNVTLNHHIVQALKANVI 300 FV+ L EEDYT+D K KSV LTE+GV AERAF ++NL+D +V L HHI QA+KA+V+ Sbjct: 241 FVRVLKNEEDYTLDEKTKSVQLTEEGVNKAERAFNIDNLFDQRHVQLLHHINQAMKAHVV 300 Query: 301 MRRXXXXXXXXXXXXXXXXFTGRLMAGRRYSDGLHQAIEAKEEIQVQNESMTLATITFQN 360 M R FTGRLM GRRYSDGLHQAIEAKE +Q+Q ESMTLA+ITFQN Sbjct: 301 MHRDADYVVENGEIVIVDQFTGRLMKGRRYSDGLHQAIEAKEGLQIQRESMTLASITFQN 360 Query: 361 YFRMYRKLGGMTGTAKTEEEEFKKIYGLEVLQVPTNKPNQRVDMPDVVYKSENGKFNAVV 420 YFRMY+KL GMTGTAKTEEEEF+ IYG++V+ +PTNKP R D PD+++K+ + KF AVV Sbjct: 361 YFRMYQKLAGMTGTAKTEEEEFRNIYGMDVMVIPTNKPVIRDDRPDLIFKTMDAKFKAVV 420 Query: 421 EEIVERHKKNQPVLVGTVSIENSERVSEMLKRKGVRHQVLNXXXXXXXXXXXXXXGQPGT 480 EI E +KK QPVLVGTVS+E SE VS +LK++ + H VLN G G Sbjct: 421 NEIEELYKKGQPVLVGTVSVETSELVSTLLKKRRIPHHVLNAKNHEKEAEIIENAGHRGA 480 Query: 481 VTIATNMAGRGTDIVLGEGVTDLGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYL 540 VTIATNMAGRGTDI LGEGV +LGGLH++GTERHESRRIDNQLRGR+GRQGDPGS+QFYL Sbjct: 481 VTIATNMAGRGTDIKLGEGVRELGGLHVLGTERHESRRIDNQLRGRSGRQGDPGSSQFYL 540 Query: 541 SLGDELMKRFGADNVLNMMDRLGFEEDQPIESRMITRAVESAQKRVEGNNFDIRKVVLQY 600 S+ DELM+RFG+DN+ MMD+LG EEDQPIES++++RAVE+AQKRVEGNNFD RK +LQY Sbjct: 541 SMEDELMRRFGSDNMRAMMDKLGMEEDQPIESKLVSRAVETAQKRVEGNNFDARKQILQY 600 Query: 601 DDVMNQQREIIYKQRREILESDNIKDIVVEMIKPVIDRIVNAHCSD-DIPENWELQEVAD 659 DDVM +QREIIYKQR E+LESDN+++IV +MI VI+R V H + ++PE+W+ + + Sbjct: 601 DDVMREQREIIYKQRMEVLESDNLREIVEKMILSVIERNVQLHTPESEVPEDWDYGAIVN 660 Query: 660 YVNSKLLEEGQLTRDDLWGKEVEELIEYIFNLVLEKYAAREERLGSELVREFEKVIVLRS 719 ++ + LL E LT D+WGK+ EE++E I++ V+E+Y +EE E +REFEKVI+LR+ Sbjct: 661 FMKANLLNEDDLTEKDIWGKDPEEIVEIIYDKVIERYNKKEEEFTPEHMREFEKVIMLRT 720 Query: 720 VDSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFNAMTATIQEEVATYIMKAH 779 VD KWM+HID MDQLRQGIHLRAYG DPLREY+FEGFEMF AM A+I+EEVA Y+MKA Sbjct: 721 VDRKWMNHIDQMDQLRQGIHLRAYGQNDPLREYRFEGFEMFEAMVASIEEEVAMYVMKAQ 780 Query: 780 IETNQERQSVVEENKI---STNGEP-AEKQPVHVQAAIGRNDPCPCGSGKKYKNCHGQ 833 ++ N +R+ V E + T+G+ A++QPV + +GRN+PCPCGSGKKYKNC GQ Sbjct: 781 VQQNLQREKVAEGQAVQPKPTDGDSKAKRQPVRKKETVGRNEPCPCGSGKKYKNCCGQ 838 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.135 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,623,879,308 Number of extensions: 193551408 Number of successful extensions: 571824 Number of sequences better than 1.0e-05: 2094 Number of HSP's gapped: 563904 Number of HSP's successfully gapped: 3110 Length of query: 835 Length of database: 3,060,696,203 Length adjustment: 145 Effective length of query: 690 Effective length of database: 1,694,649,028 Effective search space: 1169307829320 Effective search space used: 1169307829320 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 136 (57.0 bits)