BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0515.0012.p (275 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7E6.1 B3K7E6_9BACI Putative uncharacterized protein 357 7e-97 C5D7R7.1 C5D7R7_9BACI Putative uncharacterized protein 272 3e-71 B7GL66.1 B7GL66_ANOFW Uncharacterized conserved protein 271 4e-71 Q5KV98.1 Q5KV98_GEOKA Hypothetical conserved protein 269 2e-70 B4BN87.1 B4BN87_9BACI Putative uncharacterized protein 268 3e-70 >B3K7E6.1 B3K7E6_9BACI Putative uncharacterized protein Length = 301 Score = 357 bits (916), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 180/255 (70%), Positives = 212/255 (83%) Query: 16 AFNLFFLPNRIASGGVSGLSVLAEAWLGAEPAFTQWALNIPLFILGVVILGKQYGLRSLL 75 +FNLFFLPN IASGGVSGLSVLA+AWLG EPAFTQWALNIPLF+LG +LG+ YG+RSLL Sbjct: 44 SFNLFFLPNHIASGGVSGLSVLAQAWLGIEPAFTQWALNIPLFVLGFWLLGRDYGIRSLL 103 Query: 76 GSFVLPLFIFLTKDGPVPTTNPLLASIYXXXXXXXXXXXXXXXXXSTGGLSILAQIIQKI 135 GS +LPLF+FLTKD P+PT+NPLLASIY STGGL+I+AQ++QK Sbjct: 104 GSVILPLFVFLTKDWPIPTSNPLLASIYGGIGVGIGMGLVYRGRGSTGGLTIVAQLLQKY 163 Query: 136 TGFSFSLSVVLLDGTVITLAAFVLGMEQAMYALIGLFVTGKVINALEVGFSTTKVAYIIS 195 +G SFS+ VVLLD VI+ AA VL +EQA+YALIGL+VTGKVI+A+E+GFS TKVAYIIS Sbjct: 164 SGLSFSVCVVLLDAIVISSAALVLSLEQALYALIGLYVTGKVIDAIELGFSFTKVAYIIS 223 Query: 196 DQTEEISQAILNDLDRGLTKLNAQGGYTGDSRTVLMVVVGQNEITRLKALVRSVDPGAFV 255 D TE I++AIL DLDRGLTKL A+GGYTG+ RTVLMVVVGQ+EI RLK +V+SVDP AFV Sbjct: 224 DHTEPITKAILEDLDRGLTKLTAEGGYTGEHRTVLMVVVGQSEIPRLKTVVQSVDPNAFV 283 Query: 256 IITEAHEVLGEGFKR 270 II+ AHEVLGEGF+ Sbjct: 284 IISNAHEVLGEGFRN 298 >C5D7R7.1 C5D7R7_9BACI Putative uncharacterized protein Length = 286 Score = 272 bits (695), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 132/255 (51%), Positives = 180/255 (70%) Query: 16 AFNLFFLPNRIASGGVSGLSVLAEAWLGAEPAFTQWALNIPLFILGVVILGKQYGLRSLL 75 AFN+F LPNR+ASGGVSG+S +A A G +PA+ QWALNIPLFI GVV+LG+Q+G+++L+ Sbjct: 31 AFNVFLLPNRVASGGVSGISTIAYAVFGWQPAYVQWALNIPLFISGVVLLGRQFGVKTLV 90 Query: 76 GSFVLPLFIFLTKDGPVPTTNPLLASIYXXXXXXXXXXXXXXXXXSTGGLSILAQIIQKI 135 G+ LP ++LTKD T +PLL S++ STGG + AQII K Sbjct: 91 GTLFLPFVVYLTKDVEPATHDPLLGSLFGGIGVGLGLGIVFRGKASTGGTDLAAQIIHKY 150 Query: 136 TGFSFSLSVVLLDGTVITLAAFVLGMEQAMYALIGLFVTGKVINALEVGFSTTKVAYIIS 195 TG S + V+L+DG ++ AAFV +EQA+YALI L+VT K I+ +++G +K+A II+ Sbjct: 151 TGLSLGMCVILIDGLIVLTAAFVFDIEQALYALIALYVTSKTIDLVQIGLGYSKMAMIIT 210 Query: 196 DQTEEISQAILNDLDRGLTKLNAQGGYTGDSRTVLMVVVGQNEITRLKALVRSVDPGAFV 255 ++ E++ AIL+++DRG+TKL+ GGYT R VLM VV Q E T+LK LV+S+DP AFV Sbjct: 211 NEEEKVRHAILHEIDRGVTKLSGYGGYTDHERPVLMCVVQQAEFTKLKQLVKSIDPSAFV 270 Query: 256 IITEAHEVLGEGFKR 270 I+ A EVLGEGFKR Sbjct: 271 IVMNAAEVLGEGFKR 285 >B7GL66.1 B7GL66_ANOFW Uncharacterized conserved protein Length = 296 Score = 271 bits (694), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 132/255 (51%), Positives = 182/255 (71%) Query: 16 AFNLFFLPNRIASGGVSGLSVLAEAWLGAEPAFTQWALNIPLFILGVVILGKQYGLRSLL 75 AFNLF LPNR+ASGGVSG+S + A LG +PA+ QWALNIPLFI GV++LGKQ+G+++L+ Sbjct: 41 AFNLFLLPNRVASGGVSGISTILHATLGWQPAYVQWALNIPLFIAGVLLLGKQFGVKTLV 100 Query: 76 GSFVLPLFIFLTKDGPVPTTNPLLASIYXXXXXXXXXXXXXXXXXSTGGLSILAQIIQKI 135 G+ LP ++LT D T +PLL +++ STGG + AQII K Sbjct: 101 GTAFLPFVVYLTHDVAPATHDPLLGALFGGIGVGVGLGIVFRGRASTGGTDLAAQIIHKY 160 Query: 136 TGFSFSLSVVLLDGTVITLAAFVLGMEQAMYALIGLFVTGKVINALEVGFSTTKVAYIIS 195 TG S V+L+DG ++ AAFV +E+A+YALI LFVT K I+ ++VGF +K+A II+ Sbjct: 161 TGLSLGTCVILIDGLIVLTAAFVFDLERALYALIALFVTSKTIDFVQVGFGNSKMAMIIT 220 Query: 196 DQTEEISQAILNDLDRGLTKLNAQGGYTGDSRTVLMVVVGQNEITRLKALVRSVDPGAFV 255 + E++ +AIL+ +DRG+TKL+A GGYT RT+LM VV Q+E T+LK LV+++DP AFV Sbjct: 221 TKEEQVREAILHKIDRGVTKLHAYGGYTEKERTMLMCVVAQSEFTKLKQLVKTIDPSAFV 280 Query: 256 IITEAHEVLGEGFKR 270 ++ +A EVLGEGFKR Sbjct: 281 VVMDAAEVLGEGFKR 295 >Q5KV98.1 Q5KV98_GEOKA Hypothetical conserved protein Length = 287 Score = 269 bits (687), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 132/255 (51%), Positives = 180/255 (70%) Query: 16 AFNLFFLPNRIASGGVSGLSVLAEAWLGAEPAFTQWALNIPLFILGVVILGKQYGLRSLL 75 AFN+F LPNRIASGGVSG+S + A G EPA+ QWALNIPLFI GVV+LG+Q+G+++ + Sbjct: 32 AFNVFLLPNRIASGGVSGISTIMHALFGIEPAYVQWALNIPLFIAGVVLLGRQFGVKTFV 91 Query: 76 GSFVLPLFIFLTKDGPVPTTNPLLASIYXXXXXXXXXXXXXXXXXSTGGLSILAQIIQKI 135 G+ LPL ++LTK TTNPLL +I+ STGG + AQII K Sbjct: 92 GTVFLPLVVYLTKGMEPATTNPLLGAIFGGIGVGLGLGVVFRGRASTGGTDLAAQIIHKY 151 Query: 136 TGFSFSLSVVLLDGTVITLAAFVLGMEQAMYALIGLFVTGKVINALEVGFSTTKVAYIIS 195 TG S + V+ +DG ++ AAFV +E+A+YALI L+VT K I+ ++VG +K+A II+ Sbjct: 152 TGLSLGMCVIFIDGLIVLTAAFVFDIERALYALIALYVTSKTIDLVQVGLGYSKIALIIT 211 Query: 196 DQTEEISQAILNDLDRGLTKLNAQGGYTGDSRTVLMVVVGQNEITRLKALVRSVDPGAFV 255 ++ E++ +AIL+++DRG+T+L A GGYT R VLM VV Q+E T+LK LVR++DP AFV Sbjct: 212 NEEEKVRRAILHEIDRGVTRLPAYGGYTEHERPVLMCVVAQSEFTKLKQLVRTIDPTAFV 271 Query: 256 IITEAHEVLGEGFKR 270 I+ A EVLGEGF+R Sbjct: 272 IVANAAEVLGEGFQR 286 >B4BN87.1 B4BN87_9BACI Putative uncharacterized protein Length = 287 Score = 268 bits (686), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 129/255 (50%), Positives = 180/255 (70%) Query: 16 AFNLFFLPNRIASGGVSGLSVLAEAWLGAEPAFTQWALNIPLFILGVVILGKQYGLRSLL 75 AFN+F LPNRIASGGVSG+S + A G +PA+ QWALNIPLFI GVV+LG+Q+G+++ + Sbjct: 32 AFNVFLLPNRIASGGVSGISTIVHALFGIQPAYVQWALNIPLFIAGVVLLGRQFGIKTFV 91 Query: 76 GSFVLPLFIFLTKDGPVPTTNPLLASIYXXXXXXXXXXXXXXXXXSTGGLSILAQIIQKI 135 G+ LPL +++TK T NPLL +++ STGG + AQII K Sbjct: 92 GTVFLPLVVYITKGMEPATVNPLLGALFGGIGVGLGLGIVFRGRASTGGTDLAAQIIHKY 151 Query: 136 TGFSFSLSVVLLDGTVITLAAFVLGMEQAMYALIGLFVTGKVINALEVGFSTTKVAYIIS 195 TG S L V+L+DG ++ AAFV +E+A+YALI L+VT K I+ ++VG +K+A II+ Sbjct: 152 TGLSLGLCVILIDGLIVLTAAFVFDIERALYALIALYVTSKTIDLVQVGLGYSKIALIIT 211 Query: 196 DQTEEISQAILNDLDRGLTKLNAQGGYTGDSRTVLMVVVGQNEITRLKALVRSVDPGAFV 255 ++ E++ +AIL+++DRG+T+L A GGYT R VLM VV Q+E T+LK +VR++DP AFV Sbjct: 212 NEEEKVRRAILHEIDRGVTRLPAYGGYTEHERPVLMCVVAQSEFTKLKQIVRTIDPTAFV 271 Query: 256 IITEAHEVLGEGFKR 270 I+ A EVLGEGF+R Sbjct: 272 IVANASEVLGEGFQR 286 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.140 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,381,267,107 Number of extensions: 52118241 Number of successful extensions: 148193 Number of sequences better than 1.0e-05: 1780 Number of HSP's gapped: 145175 Number of HSP's successfully gapped: 1780 Length of query: 275 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 141 Effective length of database: 1,798,280,193 Effective search space: 253557507213 Effective search space used: 253557507213 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 130 (54.7 bits)