BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0515.0011.p (383 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7E3.1 B3K7E3_9BACI N-acetyl-gamma-glutamyl-phosphate reductas... 582 e-164 B1DE91.1 B1DE91_9BACL N-acetyl-gamma-glutamyl-phosphate reductas... 494 e-138 C3J1U2.1 C3J1U2_9BACI N-acetyl-gamma-glutamyl-phosphate reductas... 409 e-112 B7YB12.1 B7YB12_9BACI N-acetyl-gamma-glutamyl-phosphate reductas... 409 e-112 Q5L1V5.1 ARGC_GEOKA N-acetyl-gamma-glutamyl-phosphate reductase ... 409 e-112 >B3K7E3.1 B3K7E3_9BACI N-acetyl-gamma-glutamyl-phosphate reductase EC=1.2.1.38 Length = 394 Score = 582 bits (1499), Expect = e-164, Method: Compositional matrix adjust. Identities = 274/370 (74%), Positives = 316/370 (85%), Gaps = 1/370 (0%) Query: 14 NNTYFQERYSFIHEKQEAGMTVTDKLRAAIVGSTGYGGVELIRLLQGHPDIEITSVISSS 73 N T + F+ E+ E MT T+ +R AIVGSTGYGGVELIRLLQ HP +EITSVISSS Sbjct: 26 NGTLHKVLQLFLGERDE-DMTDTNTVRVAIVGSTGYGGVELIRLLQAHPRVEITSVISSS 84 Query: 74 SAGAPIEEGFPHLTGIVQRNLDGVDAAEIAGRADVVFTATPSGVSAKLVPQLLEAGLKVV 133 +AG PI +GFPHLT I+ RNLDGV+ AEIA AD+VF ATPSGVSAKLVP+LL+AGLKV+ Sbjct: 85 TAGVPISDGFPHLTNIITRNLDGVNPAEIAEVADLVFAATPSGVSAKLVPELLDAGLKVI 144 Query: 134 DLSGDFRLKDGAEYEQWYKHPAPPEAYLQQAVYGLCEVFGERAAGVDFVSNPGCYPTATL 193 DLSGDFRLKDGA YEQWYKH AP L++AVYGLCEVFGE VDF+SNPGCYPTATL Sbjct: 145 DLSGDFRLKDGAVYEQWYKHTAPSAELLEKAVYGLCEVFGEEVRDVDFISNPGCYPTATL 204 Query: 194 LGLVPALQAGWIKPDSIIIDAKSGVSGAGRGTSLTVHFAEINENFKTYKVNKHQHIPEIE 253 LGL+PA+ AGWI S+IIDAKSGVSGAGRGTSL H+AEINENFK YKVNKHQHIPE+E Sbjct: 205 LGLIPAISAGWIDASSLIIDAKSGVSGAGRGTSLMTHYAEINENFKAYKVNKHQHIPEVE 264 Query: 254 QTLTEIAGEKVTVTFTTHLVPMTRGIMSTMYAGMSGGYSEQDFVDLYRKYYAGRPYVRVR 313 Q LT++AGE +TVTFTTHLVPMTRGIMSTMYA ++G Y+E+DF++LYR+Y+ R +VR+R Sbjct: 265 QVLTQVAGEPITVTFTTHLVPMTRGIMSTMYATLNGPYTEEDFIELYRQYFKDRKFVRIR 324 Query: 314 DAGVLPATKEVSGSNYCDIGFATDARTGRVTVVSVIDNIVKGAAGQAIQNLNLMMGWEET 373 D GV PATKEVSGSN+CDIGFA DART RVT++SVIDN+VKGAAGQAIQNLNLMMGWEE+ Sbjct: 325 DLGVWPATKEVSGSNFCDIGFAVDARTNRVTIISVIDNVVKGAAGQAIQNLNLMMGWEES 384 Query: 374 RGLGYTPVYP 383 GL +TP+YP Sbjct: 385 LGLTFTPIYP 394 >B1DE91.1 B1DE91_9BACL N-acetyl-gamma-glutamyl-phosphate reductase EC=1.2.1.38 Length = 349 Score = 494 bits (1273), Expect = e-138, Method: Compositional matrix adjust. Identities = 232/349 (66%), Positives = 282/349 (80%) Query: 35 VTDKLRAAIVGSTGYGGVELIRLLQGHPDIEITSVISSSSAGAPIEEGFPHLTGIVQRNL 94 +++KL+ AIVGSTGYGG+ELIRLL HP +EITSVISSSSAG PI E FPHLT I L Sbjct: 1 MSEKLKVAIVGSTGYGGIELIRLLASHPLVEITSVISSSSAGMPIAEWFPHLTDIQTALL 60 Query: 95 DGVDAAEIAGRADVVFTATPSGVSAKLVPQLLEAGLKVVDLSGDFRLKDGAEYEQWYKHP 154 D VD I +ADVVFTATP+GV+AKL PQLL+AGLKV+DLSGDFRL+D A YE+WYK Sbjct: 61 DDVDPQGIKAKADVVFTATPAGVAAKLAPQLLDAGLKVIDLSGDFRLQDTAVYEEWYKKT 120 Query: 155 APPEAYLQQAVYGLCEVFGERAAGVDFVSNPGCYPTATLLGLVPALQAGWIKPDSIIIDA 214 E YL+QA+Y L E+ G++ G F+SNPGC+ T+ LLGLVPA++AGWI P +IIID+ Sbjct: 121 PADEHYLKQALYALPEINGDKVQGASFISNPGCFVTSALLGLVPAVKAGWIDPATIIIDS 180 Query: 215 KSGVSGAGRGTSLTVHFAEINENFKTYKVNKHQHIPEIEQTLTEIAGEKVTVTFTTHLVP 274 KSGVSGAGRG SL H++E+NENFK YKVN+HQH+PEIE L+E AG++V TFT HLVP Sbjct: 181 KSGVSGAGRGASLGTHYSELNENFKAYKVNQHQHVPEIEMVLSEAAGQEVVTTFTPHLVP 240 Query: 275 MTRGIMSTMYAGMSGGYSEQDFVDLYRKYYAGRPYVRVRDAGVLPATKEVSGSNYCDIGF 334 MTRGI+STMYA + G ++ DF++LY++ Y GR +VR+R GVLP TKEV GSNYCDI F Sbjct: 241 MTRGILSTMYATVKGEHNAADFIELYKQSYEGRQFVRIRKEGVLPQTKEVWGSNYCDIAF 300 Query: 335 ATDARTGRVTVVSVIDNIVKGAAGQAIQNLNLMMGWEETRGLGYTPVYP 383 DARTGR+T++SVIDN+VKGA+GQAIQNLNLMMGW+E GL + PVYP Sbjct: 301 NYDARTGRITIISVIDNLVKGASGQAIQNLNLMMGWDEGLGLQFVPVYP 349 >C3J1U2.1 C3J1U2_9BACI N-acetyl-gamma-glutamyl-phosphate reductase EC=1.2.1.38 Length = 344 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 203/345 (58%), Positives = 237/345 (68%), Gaps = 1/345 (0%) Query: 39 LRAAIVGSTGYGGVELIRLLQGHPDIEITSVISSSSAGAPIEEGFPHLTGIVQRNLDGVD 98 + AI+G+TGY G EL RLL GHP + V SSS G + E FPH+ + L ++ Sbjct: 1 MNVAIIGATGYSGAELFRLLHGHPHVSRCDVFSSSQDGVHVSESFPHVGSVDGAVLHKLE 60 Query: 99 AAEIAGRADVVFTATPSGVSAKLVPQLLEAGLKVVDLSGDFRLKDGAEYEQWYKHPAPPE 158 E R D VF ATP GVS + P L++ G+KV+DLSGDFRLKDGA YEQWY P Sbjct: 61 I-EALSRYDAVFFATPPGVSGEWAPALVDRGVKVIDLSGDFRLKDGAVYEQWYGRQTAPA 119 Query: 159 AYLQQAVYGLCEVFGERAAGVDFVSNPGCYPTATLLGLVPALQAGWIKPDSIIIDAKSGV 218 YLQ+AVYGL E E +SNPGCYPTATLLGL P ++ G IK DSII+DAKSGV Sbjct: 120 EYLQKAVYGLTEWNREAVREAVLLSNPGCYPTATLLGLAPLVKEGLIKEDSIIVDAKSGV 179 Query: 219 SGAGRGTSLTVHFAEINENFKTYKVNKHQHIPEIEQTLTEIAGEKVTVTFTTHLVPMTRG 278 SGAGR L HF+E+NEN K YKVN HQHIPEIEQTL +TF+THL+PMTRG Sbjct: 180 SGAGRKAGLGTHFSEVNENVKIYKVNVHQHIPEIEQTLQTWNEAMEPITFSTHLIPMTRG 239 Query: 279 IMSTMYAGMSGGYSEQDFVDLYRKYYAGRPYVRVRDAGVLPATKEVSGSNYCDIGFATDA 338 IM+T+YA S D VDLY+ Y G P+VR+R G PATKEV GSNYCDIG A D Sbjct: 240 IMATIYAKAKQSISPNDLVDLYKTSYEGSPFVRIRQLGQFPATKEVYGSNYCDIGLAYDE 299 Query: 339 RTGRVTVVSVIDNIVKGAAGQAIQNLNLMMGWEETRGLGYTPVYP 383 RTGRVTVVSVIDN++KGAAGQA+QN NLMMGW+E GL P+YP Sbjct: 300 RTGRVTVVSVIDNLMKGAAGQAVQNFNLMMGWDEAEGLQSLPIYP 344 >B7YB12.1 B7YB12_9BACI N-acetyl-gamma-glutamyl-phosphate reductase EC=1.2.1.38 Length = 344 Score = 409 bits (1052), Expect = e-112, Method: Compositional matrix adjust. Identities = 203/345 (58%), Positives = 237/345 (68%), Gaps = 1/345 (0%) Query: 39 LRAAIVGSTGYGGVELIRLLQGHPDIEITSVISSSSAGAPIEEGFPHLTGIVQRNLDGVD 98 + AI+G+TGY G EL RLL GHP + V SSS G + E FPH+ + L ++ Sbjct: 1 MNVAIIGATGYSGAELFRLLHGHPHVSRCDVFSSSQDGVHVSESFPHVGSVDGAVLHKLE 60 Query: 99 AAEIAGRADVVFTATPSGVSAKLVPQLLEAGLKVVDLSGDFRLKDGAEYEQWYKHPAPPE 158 E R D VF ATP GVS + P L++ G+KV+DLSGDFRLKDGA YEQWY P Sbjct: 61 I-EALSRYDAVFFATPPGVSGEWAPALVDRGVKVIDLSGDFRLKDGAVYEQWYGRQTAPA 119 Query: 159 AYLQQAVYGLCEVFGERAAGVDFVSNPGCYPTATLLGLVPALQAGWIKPDSIIIDAKSGV 218 YLQ+AVYGL E E +SNPGCYPTATLLGL P ++ G IK DSII+DAKSGV Sbjct: 120 EYLQKAVYGLTEWNREAVREAVLLSNPGCYPTATLLGLAPLVKEGLIKEDSIIVDAKSGV 179 Query: 219 SGAGRGTSLTVHFAEINENFKTYKVNKHQHIPEIEQTLTEIAGEKVTVTFTTHLVPMTRG 278 SGAGR L HF+E+NEN K YKVN HQHIPEIEQTL +TF+THL+PMTRG Sbjct: 180 SGAGRKAGLGTHFSEVNENVKIYKVNVHQHIPEIEQTLQTWNEAMEPITFSTHLIPMTRG 239 Query: 279 IMSTMYAGMSGGYSEQDFVDLYRKYYAGRPYVRVRDAGVLPATKEVSGSNYCDIGFATDA 338 IM+T+YA S D VDLY+ Y G P+VR+R G PATKEV GSNYCDIG A D Sbjct: 240 IMATIYAKAKQSISPNDLVDLYKTSYEGSPFVRIRQLGQFPATKEVYGSNYCDIGLAYDE 299 Query: 339 RTGRVTVVSVIDNIVKGAAGQAIQNLNLMMGWEETRGLGYTPVYP 383 RTGRVTVVSVIDN++KGAAGQA+QN NLMMGW+E GL P+YP Sbjct: 300 RTGRVTVVSVIDNLMKGAAGQAVQNFNLMMGWDEAEGLQSLPIYP 344 >Q5L1V5.1 ARGC_GEOKA N-acetyl-gamma-glutamyl-phosphate reductase EC=1.2.1.38 Length = 344 Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust. Identities = 203/345 (58%), Positives = 238/345 (68%), Gaps = 1/345 (0%) Query: 39 LRAAIVGSTGYGGVELIRLLQGHPDIEITSVISSSSAGAPIEEGFPHLTGIVQRNLDGVD 98 + AI+G+TGY G EL RLL GHP + V SSS G + E FPH+ + L ++ Sbjct: 1 MNVAIIGATGYSGAELFRLLHGHPHVSRCDVFSSSQDGVHVSESFPHVGSVDGAVLHKLE 60 Query: 99 AAEIAGRADVVFTATPSGVSAKLVPQLLEAGLKVVDLSGDFRLKDGAEYEQWYKHPAPPE 158 E R D VF ATP GVS + P L++ G+KV+DLSGDFRLKDGA YEQWY A P Sbjct: 61 I-EALSRYDAVFFATPPGVSGEWAPALVDRGVKVIDLSGDFRLKDGAVYEQWYGREAAPA 119 Query: 159 AYLQQAVYGLCEVFGERAAGVDFVSNPGCYPTATLLGLVPALQAGWIKPDSIIIDAKSGV 218 YLQ+AVYGL E E +SNPGCYPTATLLGL P ++ G I+ DSII+DAKSGV Sbjct: 120 EYLQKAVYGLTEWNREAVREAVLLSNPGCYPTATLLGLAPLVKEGLIQEDSIIVDAKSGV 179 Query: 219 SGAGRGTSLTVHFAEINENFKTYKVNKHQHIPEIEQTLTEIAGEKVTVTFTTHLVPMTRG 278 SGAGR L HF+E+NEN K YKVN HQHIPEIEQTL +TF+THL+PMTRG Sbjct: 180 SGAGRKAGLGTHFSEVNENVKIYKVNVHQHIPEIEQTLQTWNEAMEPITFSTHLIPMTRG 239 Query: 279 IMSTMYAGMSGGYSEQDFVDLYRKYYAGRPYVRVRDAGVLPATKEVSGSNYCDIGFATDA 338 IM+T+YA S D VDLY+ Y G P++RVR G PATKEV GSNYCDIG A D Sbjct: 240 IMATIYAKAKQPISPNDLVDLYKTSYEGSPFIRVRKVGQFPATKEVYGSNYCDIGLAYDE 299 Query: 339 RTGRVTVVSVIDNIVKGAAGQAIQNLNLMMGWEETRGLGYTPVYP 383 RTGRVTVVSVIDN++KGAAGQA+QN NLMMGW+E GL P+YP Sbjct: 300 RTGRVTVVSVIDNLMKGAAGQAVQNFNLMMGWDEAEGLQSLPIYP 344 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,369,652,743 Number of extensions: 103512993 Number of successful extensions: 340956 Number of sequences better than 1.0e-05: 1373 Number of HSP's gapped: 337067 Number of HSP's successfully gapped: 1375 Length of query: 383 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 246 Effective length of database: 1,770,017,148 Effective search space: 435424218408 Effective search space used: 435424218408 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)