BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0515.0010.p (410 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7E2.1 B3K7E2_9BACI Arginine biosynthesis bifunctional protein... 584 e-165 B1DE90.1 B1DE90_9BACL Arginine biosynthesis bifunctional protein... 542 e-152 Q2B923.1 Q2B923_9BACI Bifunctional ornithine acetyltransferase/N... 442 e-122 B7GM07.1 B7GM07_ANOFW N-acetylglutamate synthase (N-acetylornith... 434 e-119 Q9K8V3.1 ARGJ_BACHD Arginine biosynthesis bifunctional protein a... 433 e-119 >B3K7E2.1 B3K7E2_9BACI Arginine biosynthesis bifunctional protein ArgJ EC=2.3.1.1 Length = 408 Score = 584 bits (1506), Expect = e-165, Method: Compositional matrix adjust. Identities = 292/407 (71%), Positives = 329/407 (80%), Gaps = 1/407 (0%) Query: 4 KQVFTVVEGGSVTTPKGFTAGGLHCGLKKTERNDLAAILCEVPATAAAVYTTNVFQAAPL 63 + F +++GGS+ TP+GF A GLHCGLKKT+RNDL I+C+VPA AAAVYTTN+FQAAPL Sbjct: 3 ENTFAIIDGGSIVTPQGFKAAGLHCGLKKTDRNDLGVIVCDVPAVAAAVYTTNLFQAAPL 62 Query: 64 KVTRESLANATLQAVIVNSGNANACTGEQGXXXXXXXXXXXXXXLGVNELDVAVASTGVI 123 KVTRESL + L+A++VNSGNANACTG+QG G++ DVAVASTGVI Sbjct: 63 KVTRESLEDGKLRAIVVNSGNANACTGKQGEEDAYTMRADTAAQFGLDVNDVAVASTGVI 122 Query: 124 GELLKMDRVRSGIAGLPEKLDGGAAGAEEFCQAILTTDLVKKECCVTVKVGEVEVTIAGA 183 GELLKMDRV SGIAGLP +L G + GAE F QAILTTDLVKKE CVTV+V +VTIAG Sbjct: 123 GELLKMDRVSSGIAGLPARLSGESEGAESFSQAILTTDLVKKEACVTVQVDGTKVTIAGT 182 Query: 184 AKGSGMIHPNMATMLGFMTTDAVIDGEDLLSLLRTATNTTFNMITVDGDTSTNDMLVTMA 243 AKGSGMIHPNMATMLGFMTTDAVI E L LLR TN TFNMITVDGDTSTNDMLV MA Sbjct: 183 AKGSGMIHPNMATMLGFMTTDAVIGQEALQLLLRQTTNLTFNMITVDGDTSTNDMLVAMA 242 Query: 244 SGLAGNEKLTRLHADWDAFAAAFTHVCKSLAMAIARDGEGATKLIEVQIDGAVHDEAAAA 303 SGLAG++ LT H DWDAFAA F +VC+ LA AIARDGEGA++LIEV++DGA D+ A A Sbjct: 243 SGLAGHDVLTPEHPDWDAFAAGFHYVCQQLAKAIARDGEGASRLIEVRVDGAESDDDAQA 302 Query: 304 IAKTVVGSSLVKSAIFGADANWGRIIAAVGRAGVPVSPERVDISLGGIEVLRQSRPVAFD 363 IAKT++GSSLVKSA+FGADANWGRIIAAVGRAG PV+PE VDI++G I VL QSRPVAFD Sbjct: 303 IAKTIIGSSLVKSAVFGADANWGRIIAAVGRAGRPVNPETVDIAIGPISVLEQSRPVAFD 362 Query: 364 EEQALHYLQKSDTVRITVALADGEGKATAWGCDLTYDYVRINAAYRT 410 E+ AL YLQ DTV I V L G G ATAWGCDLTYDYVRINAAYRT Sbjct: 363 EDAALAYLQ-GDTVDIDVKLHIGSGSATAWGCDLTYDYVRINAAYRT 408 >B1DE90.1 B1DE90_9BACL Arginine biosynthesis bifunctional protein ArgJ EC=2.3.1.1 Length = 414 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 281/408 (68%), Positives = 320/408 (78%), Gaps = 2/408 (0%) Query: 4 KQVFTVVEGGSVTTPKGFTAGGLHCGLKKTERNDLAAILCEVPATAAAVYTTNVFQAAPL 63 K +++VV GS+TTPKGF AGGLHCGLKKT R+DL AI+CEVPA +A VYTTNVFQAAP+ Sbjct: 8 KALYSVVSDGSITTPKGFRAGGLHCGLKKTTRHDLGAIVCEVPAASAGVYTTNVFQAAPI 67 Query: 64 KVTRESL-ANATLQAVIVNSGNANACTGEQGXXXXXXXXXXXXXXLGVNELDVAVASTGV 122 KVTRES+ ++ L+AVIVNSGNANA TG+QG +GV+ VAVASTGV Sbjct: 68 KVTRESIESDGFLRAVIVNSGNANAVTGKQGEDDAYEMRSRFAESIGVSADQVAVASTGV 127 Query: 123 IGELLKMDRVRSGIAGLPEKLDGGAAGAEEFCQAILTTDLVKKECCVTVKVGEVEVTIAG 182 IGE LKMD+VR+GI LP KL+ A+ FCQAILTTDLV+K CV+V++ V IAG Sbjct: 128 IGENLKMDKVRAGIDALPAKLENDRDAADGFCQAILTTDLVQKMVCVSVEIDGQTVHIAG 187 Query: 183 AAKGSGMIHPNMATMLGFMTTDAVIDGEDLLSLLRTATNTTFNMITVDGDTSTNDMLVTM 242 AAKGSGMIHPNMATMLGF+TTDA I L +LLR ATN TFNMITVDGDTSTNDMLV M Sbjct: 188 AAKGSGMIHPNMATMLGFVTTDAAIGSVALQTLLREATNYTFNMITVDGDTSTNDMLVAM 247 Query: 243 ASGLAGNEKLTRLHADWDAFAAAFTHVCKSLAMAIARDGEGATKLIEVQIDGAVHDEAAA 302 ASGLAGN +LT H W AF+A +VC+ LA AIARDGEGATKL+EVQ+ GAV+DEAA Sbjct: 248 ASGLAGNSELTSEHEGWAAFSAGLRYVCEVLAKAIARDGEGATKLVEVQVHGAVNDEAAN 307 Query: 303 AIAKTVVGSSLVKSAIFGADANWGRIIAAVGRAGVPVSPERVDISLGGIEVLRQSRPVAF 362 AIAKTV+GSSLVKSA+FGADANWGRIIAAVGRAG PV+P+ VD+ +G I L SRPVAF Sbjct: 308 AIAKTVIGSSLVKSAVFGADANWGRIIAAVGRAGQPVNPDTVDVRIGDIVTLEGSRPVAF 367 Query: 363 DEEQALHYLQKSDTVRITVALADGEGKATAWGCDLTYDYVRINAAYRT 410 DE+ AL YL K DTV I V L G ATAWGCDLTYDYVRINAAYRT Sbjct: 368 DEDAALEYL-KGDTVVIRVDLHMDNGTATAWGCDLTYDYVRINAAYRT 414 >Q2B923.1 Q2B923_9BACI Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein EC=2.3.1.35 Length = 410 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 223/411 (54%), Positives = 292/411 (71%), Gaps = 5/411 (1%) Query: 1 MSEKQVFTVVEGGSVTTPKGFTAGGLHCGLKKTERNDLAAILCEVPATAAAVYTTNVFQA 60 +S++ + GS+ +PKG+ + G+H GL+ +++ D+ AI+ VPA +AAVYTT++FQA Sbjct: 4 LSQESAVREISDGSIISPKGYKSAGVHAGLRYSKK-DVGAIISTVPANSAAVYTTSLFQA 62 Query: 61 APLKVTRESLA-NATLQAVIVNSGNANACTGEQGXXXXXXXXXXXXXXLGVNELDVAVAS 119 APLKVT+ESLA LQAVIVNS ANACTG+QG G+ E VAVAS Sbjct: 63 APLKVTQESLAAGGVLQAVIVNSACANACTGQQGYKDALEMRKLAAGKFGLEECSVAVAS 122 Query: 120 TGVIGELLKMDRVRSGIAGLPEKLDGGAAGAEEFCQAILTTDLVKKECCVTVKVGEVEVT 179 TGVIGE L+M+++ +GIA L K GA AE+F AILTTD V K C + V + Sbjct: 123 TGVIGEYLQMEKIHAGIAALEPK--NGAESAEDFQTAILTTDTVMKSCAYEADIDGVPIR 180 Query: 180 IAGAAKGSGMIHPNMATMLGFMTTDAVIDGEDLLSLLRTATNTTFNMITVDGDTSTNDML 239 + GAAKGSGMIHPNMATMLGF+TTDA I L L+ TN+TFN ITVDGDTSTNDM+ Sbjct: 181 MGGAAKGSGMIHPNMATMLGFVTTDACISQSVLQKALKEVTNSTFNQITVDGDTSTNDMV 240 Query: 240 VTMASGLAGNEKLTRLHADWDAFAAAFTHVCKSLAMAIARDGEGATKLIEVQIDGAVHDE 299 + MA+GLAGN+ L+ H +WD F C++LA IA+DGEGATKLIE ++ GAV D+ Sbjct: 241 LVMANGLAGNQPLSPEHPEWDVFLGLLGSCCENLAKQIAKDGEGATKLIEAEVAGAVSDQ 300 Query: 300 AAAAIAKTVVGSSLVKSAIFGADANWGRIIAAVGRAGVPVSPERVDISLGGIEVLRQSRP 359 AA AK +VGS+LVK+A++GADANWGRII A+G++ + + PE VDI +G I +L+ S P Sbjct: 301 EGAAAAKQIVGSNLVKTAVYGADANWGRIIGALGQSNISLDPENVDIWIGPICMLKNSEP 360 Query: 360 VAFDEEQALHYLQKSDTVRITVALADGEGKATAWGCDLTYDYVRINAAYRT 410 AF EE+A YLQK + ++I+V L +G+G+ AWGCDL+YDYV+INA+YRT Sbjct: 361 QAFSEEEANAYLQK-ENIKISVDLHNGKGRGKAWGCDLSYDYVKINASYRT 410 >B7GM07.1 B7GM07_ANOFW N-acetylglutamate synthase (N-acetylornithine aminotransferase) Length = 408 Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust. Identities = 232/412 (56%), Positives = 293/412 (71%), Gaps = 8/412 (1%) Query: 1 MSEKQVFTVVEGGSVTTPKGFTAGGLHCGLKKTERNDLAAILCEVPATAAAVYTTNVFQA 60 + EK+V + +G ++ TPKGF A G+H GL+ T++ DL I+C+VPAT AAVYT NVFQA Sbjct: 3 VKEKKVKYIADG-TIVTPKGFQAAGVHAGLRYTKK-DLGVIVCDVPATCAAVYTQNVFQA 60 Query: 61 APLKVTRESLA-NATLQAVIVNSGNANACTGEQGXXXXXXXXXXXXXXLGVNELDVAVAS 119 APL+VT++S+A LQAVIVNS ANACTGEQG G++E VAVAS Sbjct: 61 APLQVTKQSIAVEQKLQAVIVNSAYANACTGEQGLQDAYEMRKLCAETFGLHEHLVAVAS 120 Query: 120 TGVIGELLKMDRVRSGIAGLPEKLDGGAAGAEEFCQAILTTDLV-KKECCVTVKVGEVEV 178 TGVIGE L M+++R+ I L K + +A +F AILTTDLV KK C TV G+V V Sbjct: 121 TGVIGEYLPMEKIRASIPKLKPKAEWDSA--VDFQTAILTTDLVMKKTCYETVVDGQV-V 177 Query: 179 TIAGAAKGSGMIHPNMATMLGFMTTDAVIDGEDLLSLLRTATNTTFNMITVDGDTSTNDM 238 T+AGAAKGSGMIHPNMATML F+TTDA I + L LR+ TN +FN ITVDG+TSTNDM Sbjct: 178 TVAGAAKGSGMIHPNMATMLAFITTDANIPSDVLQDALRSITNVSFNQITVDGETSTNDM 237 Query: 239 LVTMASGLAGNEKLTRLHADWDAFAAAFTHVCKSLAMAIARDGEGATKLIEVQIDGAVHD 298 ++ MASGLAGNE L+ H DW+ F A C+ LA IARDGEGATKLIE ++ GA D Sbjct: 238 VIVMASGLAGNEPLSPQHPDWENFYEALRQTCEHLAKQIARDGEGATKLIEARVKGAKTD 297 Query: 299 EAAAAIAKTVVGSSLVKSAIFGADANWGRIIAAVGRAGVPVSPERVDISLGGIEVLRQSR 358 E A AK +VGS+LVK+A++GADANWGRII A+G +G + P+ VD+ +G + +L+QS+ Sbjct: 298 EEAKWAAKHIVGSNLVKTAVYGADANWGRIIGAIGHSGAYIKPDCVDVWIGSVCMLKQSQ 357 Query: 359 PVAFDEEQALHYLQKSDTVRITVALADGEGKATAWGCDLTYDYVRINAAYRT 410 P+ F EE+A L + D V ITV L G G+ AWGCDLTYDY++INA+YRT Sbjct: 358 PMPFSEEEAKAALME-DVVVITVDLHVGGGEGIAWGCDLTYDYIKINASYRT 408 >Q9K8V3.1 ARGJ_BACHD Arginine biosynthesis bifunctional protein argJ Glutamate N-acetyltransferase Amino-acid acetyltransferase EC=2.3.1.35 EC=2.3.1.1 Length = 411 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 231/402 (57%), Positives = 277/402 (68%), Gaps = 4/402 (0%) Query: 10 VEGGSVTTPKGFTAGGLHCGLKKTERNDLAAILCEVPATAAAVYTTNVFQAAPLKVTRES 69 +E GSVT+ KGF+A G+H G+K+ +R DL AI+CEVPA++AAVYT N QAAPLKVT+ES Sbjct: 13 LETGSVTSAKGFSAVGIHTGVKR-KRKDLGAIVCEVPASSAAVYTLNKVQAAPLKVTQES 71 Query: 70 LA-NATLQAVIVNSGNANACTGEQGXXXXXXXXXXXXXXLGVNELDVAVASTGVIGELLK 128 +A LQA+IVNSG ANACTG++G + E VAV STGVIGE L Sbjct: 72 IAVEGKLQAMIVNSGIANACTGKRGLDDAYTMRAVGAETFHIPEHYVAVTSTGVIGEFLP 131 Query: 129 MDRVRSGIAGLPEKLDGGAAGAEEFCQAILTTDLVKKECCVTVKVGEVEVTIAGAAKGSG 188 MD + +GI L K + GA F +AILTTD V+K C V VT+ G AKGSG Sbjct: 132 MDVITNGIRQL--KPEATIEGAHAFNEAILTTDTVEKHTCYQTIVNGKTVTVGGVAKGSG 189 Query: 189 MIHPNMATMLGFMTTDAVIDGEDLLSLLRTATNTTFNMITVDGDTSTNDMLVTMASGLAG 248 MIHPNMATML F+TTDA ID L L TN TFN ITVDGDTSTNDM+V MASGLA Sbjct: 190 MIHPNMATMLSFVTTDANIDHGHLQGALSAITNETFNRITVDGDTSTNDMVVVMASGLAE 249 Query: 249 NEKLTRLHADWDAFAAAFTHVCKSLAMAIARDGEGATKLIEVQIDGAVHDEAAAAIAKTV 308 NE LT H DW F A C+ LA IARDGEGATKLIEV++ GA +D+ A +AK + Sbjct: 250 NEALTPEHPDWANFYKALQLACEDLAKQIARDGEGATKLIEVEVTGAANDQEAGMVAKQI 309 Query: 309 VGSSLVKSAIFGADANWGRIIAAVGRAGVPVSPERVDISLGGIEVLRQSRPVAFDEEQAL 368 VGS LVK+AI+GADANWGRII A+G +G V+ E +DI++G I L+QS P F EE+A Sbjct: 310 VGSDLVKTAIYGADANWGRIICAIGYSGCEVNQETIDIAIGPIVTLKQSEPTGFSEEEAT 369 Query: 369 HYLQKSDTVRITVALADGEGKATAWGCDLTYDYVRINAAYRT 410 YL+++D V+I+V L G G AWGCDLTYDYVRINA YRT Sbjct: 370 AYLKEADPVKISVNLHIGNGTGKAWGCDLTYDYVRINAGYRT 411 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.131 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,209,308,532 Number of extensions: 85938933 Number of successful extensions: 235613 Number of sequences better than 1.0e-05: 988 Number of HSP's gapped: 231910 Number of HSP's successfully gapped: 996 Length of query: 410 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 272 Effective length of database: 1,760,596,133 Effective search space: 478882148176 Effective search space used: 478882148176 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)