BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0515.0009.p (272 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7E1.1 B3K7E1_9BACI Acetylglutamate kinase 343 7e-93 B1DE89.1 B1DE89_9BACL Acetylglutamate kinase 340 9e-92 Q9K8V4.1 ARGB_BACHD Acetylglutamate kinase EC=2.7.2.8 200 1e-49 C1PF76.1 C1PF76_BACCO Acetylglutamate kinase 193 1e-47 C5D766.1 C5D766_9BACI Acetylglutamate kinase 191 6e-47 >B3K7E1.1 B3K7E1_9BACI Acetylglutamate kinase Length = 278 Score = 343 bits (881), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 180/268 (67%), Positives = 202/268 (75%), Gaps = 1/268 (0%) Query: 4 EPVENHKAGGLFVMKCGGSTLAALPDSFFDDLRELQLSGAQPVIVHGGGPAISGNLEKLG 63 +PV+ A FVMKCGGSTLAALPDSFF+DL+ LQ+ G PVIVHGGGPAISGNLEKLG Sbjct: 11 QPVQTSSAD-TFVMKCGGSTLAALPDSFFEDLKNLQVKGVNPVIVHGGGPAISGNLEKLG 69 Query: 64 IESSFVNGLRVTTEEVLDVVEMTLAGSINKAIVRRIXXXXXXXXXXXXVDGRLITARLVA 123 IE+ FVNGLR TTE+VLDVVEM LAG+INK IVRRI DG LI A+ V Sbjct: 70 IETEFVNGLRKTTEDVLDVVEMVLAGTINKQIVRRIQSVGGSAIGLSGSDGGLIEAKPVT 129 Query: 124 NSXXXXXXXXXXXXNAEIVAGVLAMGYIPVIAPIGVDAGGQRYNINADTAAGAVASFIGS 183 N + I++GVL MGY+PV+APIGVD+ GQRYNINADTAAGAVAS +G Sbjct: 130 NHAEVGWVGDVTLVKSSILSGVLGMGYMPVVAPIGVDSSGQRYNINADTAAGAVASHLGV 189 Query: 184 PQMIVVTDVPGIMRTLDGRKTVLPSVTVGQIEDLIKNGEIYGGMIPKVRAAIDCIQGSVS 243 +MIVVTDVPGIM+ G K VLP+VTV +IED+I GEIYGGMIPKVRAAI CI G VS Sbjct: 190 NRMIVVTDVPGIMKGSGGEKRVLPTVTVQEIEDMIGTGEIYGGMIPKVRAAISCIHGKVS 249 Query: 244 EVVIVDGKEPRVLSRVLQGEKLGTRIIR 271 EVVIVDG EP VLSRVL GE LGTRI+R Sbjct: 250 EVVIVDGSEPNVLSRVLGGEVLGTRIVR 277 >B1DE89.1 B1DE89_9BACL Acetylglutamate kinase Length = 262 Score = 340 bits (872), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 175/258 (67%), Positives = 200/258 (77%) Query: 15 FVMKCGGSTLAALPDSFFDDLRELQLSGAQPVIVHGGGPAISGNLEKLGIESSFVNGLRV 74 FVMKCGGSTLAALPDSFF +LRELQ SG PVIVHGGGPAIS L KLGIE+ FVNGLR Sbjct: 5 FVMKCGGSTLAALPDSFFGELRELQQSGVHPVIVHGGGPAISETLTKLGIETEFVNGLRK 64 Query: 75 TTEEVLDVVEMTLAGSINKAIVRRIXXXXXXXXXXXXVDGRLITARLVANSXXXXXXXXX 134 T + VLDVVEM LAG INK IVR+I VDG LI A+ VAN+ Sbjct: 65 TNDAVLDVVEMVLAGRINKEIVRKIQTNGAKALGLSGVDGLLIQAKPVANTAEIGFVGDV 124 Query: 135 XXXNAEIVAGVLAMGYIPVIAPIGVDAGGQRYNINADTAAGAVASFIGSPQMIVVTDVPG 194 NAE++ GV+AMGY+PVIAPIG+DA GQRYNINADTAAGAVAS +G+PQMIVVTDVPG Sbjct: 125 TDVNAEVIEGVMAMGYMPVIAPIGIDASGQRYNINADTAAGAVASRLGAPQMIVVTDVPG 184 Query: 195 IMRTLDGRKTVLPSVTVGQIEDLIKNGEIYGGMIPKVRAAIDCIQGSVSEVVIVDGKEPR 254 IMRT+DG K VLPSVTV +IE++I +GEIYGGMIPKVRAA+ CIQG V EVVIV G+EP Sbjct: 185 IMRTVDGEKKVLPSVTVAEIEEMIASGEIYGGMIPKVRAAVQCIQGRVREVVIVSGEEPG 244 Query: 255 VLSRVLQGEKLGTRIIRS 272 VLSR ++ +GTRI++ Sbjct: 245 VLSRAVREGGVGTRIVQE 262 >Q9K8V4.1 ARGB_BACHD Acetylglutamate kinase EC=2.7.2.8 Length = 260 Score = 200 bits (508), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 106/241 (43%), Positives = 155/241 (64%), Gaps = 5/241 (2%) Query: 12 GGLFVMKCGGSTLAALPDSFFDDLRELQLSGAQPVIVHGGGPAISGNLEKLGIESSFVNG 71 G + V+KCGGS L +L DSFF +R LQ GA+P+IVHGGGPAI+G L KL +E++FV+G Sbjct: 2 GDIVVIKCGGSVLDSLSDSFFTSVRRLQAEGAKPIIVHGGGPAINGMLAKLEVETTFVDG 61 Query: 72 LRVTTEEVLDVVEMTLAGSINKAIVRRIXXXXXXXXXXXXVDGRLITARLVANSXXXXXX 131 LR TT+ VL V EM L G NK +VR++ DG L+ + + + Sbjct: 62 LRKTTDSVLSVAEMVLCGQTNKKVVRKLQKAGVKSIGLSGSDGELVRVKAI-DEAILGYV 120 Query: 132 XXXXXXNAEIVAGVLAMGYIPVIAPIGVDAGGQRYNINADTAAGAVASFIGSPQMIVVTD 191 N E++ ++A G++PV+APIGV+ + YN+NADT AGAVA+ + + ++I VTD Sbjct: 121 GEPVHVNGELLHMLVADGFVPVLAPIGVNDEFEPYNVNADTVAGAVATALQAKELIFVTD 180 Query: 192 VPGIMRTLDGRKTVLPSVTVGQIEDLIKNGEIYGGMIPKVRAAIDCIQGSVSEVVIVDGK 251 V GI++ ++P++T ++E LI+ G IYGGMIPKVR+AI + G++ V IV+G Sbjct: 181 VAGILK----DDELVPALTPEEVESLIEEGTIYGGMIPKVRSAIHSLTGTLEAVSIVNGN 236 Query: 252 E 252 + Sbjct: 237 D 237 >C1PF76.1 C1PF76_BACCO Acetylglutamate kinase Length = 262 Score = 193 bits (490), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 123/255 (48%), Positives = 165/255 (64%), Gaps = 7/255 (2%) Query: 16 VMKCGGSTLAALPDSFFDDLRELQLS-GAQPVIVHGGGPAISGNLEKLGIESSFVNGLRV 74 V+KCGGS L LPD+FF++L +++ G +PVIVHGGGPAIS LEK+ I++ F NGLRV Sbjct: 5 VIKCGGSILHQLPDAFFENLVQIKARFGLEPVIVHGGGPAISAMLEKMQIKTQFKNGLRV 64 Query: 75 TTEEVLDVVEMTLAGSINKAIVRRIXXXXXXXXXXXXVDGRLITARLVANSXXXXXXXXX 134 TTE VL+VVEM L+GSINK I RR+ D RL+TAR + + Sbjct: 65 TTEPVLNVVEMVLSGSINKWITRRLSQAGAKAVGISGTDSRLLTARKI-ETPNLGYVGEI 123 Query: 135 XXXNAEIVAGVLAMGYIPVIAPIGVDAGGQRYNINADTAAGAVASFIGSPQMIVVTDVPG 194 N +++ +L +IPVI+P+ D GQR N+NAD AA AVA + + ++ +VTDVPG Sbjct: 124 ESVNEQVLLALLRQQFIPVISPVATDKNGQRLNVNADLAAAAVARKMNA-RVWMVTDVPG 182 Query: 195 IMRTLDGRKTVLPSVTVGQIEDLIKNGEIYGGMIPKVRAAIDCIQGSVSEVVIVDGKEPR 254 +M ++G+ VLP +T GQ++ LI+ I GGMIPKVRAA +CI+ V EVVIVDG E Sbjct: 183 VM--MEGK--VLPYLTPGQVDGLIQKQVITGGMIPKVRAAAECIRSGVKEVVIVDGTEED 238 Query: 255 VLSRVLQGEKLGTRI 269 L + G K GT+ Sbjct: 239 SLLFLAGGGKTGTKF 253 >C5D766.1 C5D766_9BACI Acetylglutamate kinase Length = 257 Score = 191 bits (485), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 112/251 (44%), Positives = 148/251 (58%), Gaps = 5/251 (1%) Query: 12 GGLFVMKCGGSTLAALPDSFFDDLRELQLSGAQPVIVHGGGPAISGNLEKLGIESSFVNG 71 G V+KCGGS L+ L SFF L+E+ G V+VHGGGP I L++L + S FVNG Sbjct: 2 GKTIVIKCGGSVLSDLSPSFFTSLQEMYAQGMNIVLVHGGGPEIGQMLKRLNVPSEFVNG 61 Query: 72 LRVTTEEVLDVVEMTLAGSINKAIVRRIXXXXXXXXXXXXVDGRLITARLVANSXXXXXX 131 LR TT+EVL+V EM LAG +NK +V + VD L+ A + + Sbjct: 62 LRKTTKEVLEVAEMVLAGKVNKQLVALLRQHGLPAVGVSGVDACLLQAAPI-DLAKLGYV 120 Query: 132 XXXXXXNAEIVAGVLAMGYIPVIAPIGVDAGGQRYNINADTAAGAVASFIGSPQMIVVTD 191 NA+ V +L YIP+I+PIG D GQ+YNINADTAAGAVA I + Q++ VTD Sbjct: 121 GEVVNVNADFVHQLLKSRYIPIISPIGADKDGQKYNINADTAAGAVAKAIKAAQLLFVTD 180 Query: 192 VPGIMRTLDGRKTVLPSVTVGQIEDLIKNGEIYGGMIPKVRAAIDCIQGSVSEVVIVDGK 251 VPGI+R +++ T+ IE ++ G I GGMIPKV+AAI + S+ EV+IV GK Sbjct: 181 VPGILRN----GSIVEQATIDVIERMMNEGIITGGMIPKVKAAIAALSESLHEVMIVSGK 236 Query: 252 EPRVLSRVLQG 262 P + L G Sbjct: 237 TPFYENGQLHG 247 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.139 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,405,061,526 Number of extensions: 55392829 Number of successful extensions: 152817 Number of sequences better than 1.0e-05: 1436 Number of HSP's gapped: 150582 Number of HSP's successfully gapped: 1494 Length of query: 272 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 139 Effective length of database: 1,807,701,208 Effective search space: 251270467912 Effective search space used: 251270467912 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)