BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0515.0004.p (411 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K7D7.1 B3K7D7_9BACI Argininosuccinate synthase EC=6.3.4.5 753 0.0 B9XCH2.1 B9XCH2_9BACT Argininosuccinate synthase EC=6.3.4.5 648 0.0 B4D035.1 B4D035_9BACT Argininosuccinate synthase EC=6.3.4.5 642 0.0 B1ZUD4.1 B1ZUD4_OPITP Argininosuccinate synthase EC=6.3.4.5 596 e-168 C0AB13.1 C0AB13_9BACT Argininosuccinate synthase EC=6.3.4.5 591 e-167 >B3K7D7.1 B3K7D7_9BACI Argininosuccinate synthase EC=6.3.4.5 Length = 410 Score = 753 bits (1945), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/410 (88%), Positives = 388/410 (94%) Query: 1 MPKEKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELNGLEEKALATGASKVY 60 M K+KIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEEL+GLEEKALATGASKVY Sbjct: 1 MAKQKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELDGLEEKALATGASKVY 60 Query: 61 IDDLRDEFASDFIYPMFQSGALYEGQYLLGTSIARPLIAKRMVDIAIAEGATAIAHGATG 120 IDDLRDEFA+DFI+PMFQ+GA+YEGQYLLGTSIARPLIAKRMVDIA AEGATAIAHGATG Sbjct: 61 IDDLRDEFANDFIFPMFQAGAMYEGQYLLGTSIARPLIAKRMVDIARAEGATAIAHGATG 120 Query: 121 KGNDQVRFELNAAALSPSIKVIAPWRLEEFRSQFPGRAEMIAYAEANGIPVQASAAKPYS 180 KGNDQVRFEL A L+P I+VIAPWR+EEFR+ FPGRAEMIAYAEA+GIPV ASAAK YS Sbjct: 121 KGNDQVRFELGVAGLAPDIEVIAPWRIEEFRNSFPGRAEMIAYAEAHGIPVTASAAKSYS 180 Query: 181 MDRNLLHISYESGVLEDPWFDPSAPENKGMFLLSNAPEDAPDQPEYLELEFLKGDCVALN 240 MDRNLLHISYESGVLEDPWFD SA ++K M+LLS +PEDAPD+ EYLEL F +G+ VALN Sbjct: 181 MDRNLLHISYESGVLEDPWFDASAEDSKDMYLLSVSPEDAPDEAEYLELTFEQGNVVALN 240 Query: 241 GEPLSPLQVMEKLNELGGKHGIGRVDMVENRFVGMKSRGVYETPGGTILFTAHRKMESIT 300 GE +SPLQVMEKLNELGGKHGIGRVDMVENRFVGMKSRGVYETPGGTILFTAHRKMESIT Sbjct: 241 GESMSPLQVMEKLNELGGKHGIGRVDMVENRFVGMKSRGVYETPGGTILFTAHRKMESIT 300 Query: 301 MDREVMNLRDSLITRYSTLVYNGFWFAPERLALQALVKESQKNVTGTVRVKLYKGNIIGA 360 MDREVMNLRDSLITRYSTLVYNGFWFAPERLALQALV ESQKNVTGTVRVKLYKGN+IGA Sbjct: 301 MDREVMNLRDSLITRYSTLVYNGFWFAPERLALQALVTESQKNVTGTVRVKLYKGNVIGA 360 Query: 361 GVKSPVSLYNPEIATMEADPTQAYDQGDATGFIRLNALRLKVSAGVAESN 410 GVKSPVSLYNP+IATMEADPTQAYDQGDATGFIRLNALRLKV+ GV ++ Sbjct: 361 GVKSPVSLYNPDIATMEADPTQAYDQGDATGFIRLNALRLKVATGVNQNQ 410 >B9XCH2.1 B9XCH2_9BACT Argininosuccinate synthase EC=6.3.4.5 Length = 483 Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust. Identities = 305/409 (74%), Positives = 356/409 (87%) Query: 3 KEKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELNGLEEKALATGASKVYID 62 + KIVLAYSGGLDTSV+L W+KE Y+AE+IAF ADIGQ+EEL GL++KA+ TGASK+YID Sbjct: 71 RMKIVLAYSGGLDTSVLLSWIKEKYNAEMIAFCADIGQEEELKGLDKKAMKTGASKLYID 130 Query: 63 DLRDEFASDFIYPMFQSGALYEGQYLLGTSIARPLIAKRMVDIAIAEGATAIAHGATGKG 122 +L++EFA DFI+PM Q+GA+YE QY LGTSIARPLIAKRMV+IA E A IAHGATGKG Sbjct: 131 NLQEEFARDFIFPMMQAGAIYENQYFLGTSIARPLIAKRMVEIARKEKAQFIAHGATGKG 190 Query: 123 NDQVRFELNAAALSPSIKVIAPWRLEEFRSQFPGRAEMIAYAEANGIPVQASAAKPYSMD 182 NDQVRFEL AAAL+P ++VIAPWR FRSQFPGRAEMI Y IPV+ASA KPYSMD Sbjct: 191 NDQVRFELTAAALAPDLEVIAPWRDASFRSQFPGRAEMIQYCADKKIPVEASAKKPYSMD 250 Query: 183 RNLLHISYESGVLEDPWFDPSAPENKGMFLLSNAPEDAPDQPEYLELEFLKGDCVALNGE 242 RNLLHIS+E+G+LEDPW D APENK MF LS +PEDAP++PEY+ L+F+KGDCVA+NG+ Sbjct: 251 RNLLHISFEAGILEDPWLDAFAPENKAMFKLSVSPEDAPNKPEYVTLDFVKGDCVAVNGQ 310 Query: 243 PLSPLQVMEKLNELGGKHGIGRVDMVENRFVGMKSRGVYETPGGTILFTAHRKMESITMD 302 L+PL VM+ LN+LGGKHG+GRVD+VENRFVGMKSRGVYETPGG IL AHR+MESITMD Sbjct: 311 KLNPLGVMKALNKLGGKHGVGRVDLVENRFVGMKSRGVYETPGGAILHFAHRQMESITMD 370 Query: 303 REVMNLRDSLITRYSTLVYNGFWFAPERLALQALVKESQKNVTGTVRVKLYKGNIIGAGV 362 REVM++RDSLI +Y+ LVY GFWFAPERLALQALV ESQK+VTGT+RVKLYKGNI+ AG Sbjct: 371 REVMHIRDSLIPKYAELVYYGFWFAPERLALQALVTESQKDVTGTIRVKLYKGNIMTAGR 430 Query: 363 KSPVSLYNPEIATMEADPTQAYDQGDATGFIRLNALRLKVSAGVAESNK 411 KSPVSLYNP IATMEADPT+AY+Q DATGFIRLN LRL+V++ V + K Sbjct: 431 KSPVSLYNPHIATMEADPTKAYNQDDATGFIRLNGLRLRVASQVHNAAK 479 >B4D035.1 B4D035_9BACT Argininosuccinate synthase EC=6.3.4.5 Length = 429 Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust. Identities = 310/424 (73%), Positives = 358/424 (84%), Gaps = 22/424 (5%) Query: 5 KIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELNGLEEKALATGASKVYIDDL 64 KIV+AYSGGLDTSV+L WLKETY AEI+AF AD+GQ+EEL+GLE KAL TGASK YIDDL Sbjct: 2 KIVVAYSGGLDTSVLLTWLKETYSAEIVAFCADVGQEEELDGLEAKALRTGASKCYIDDL 61 Query: 65 RDEFASDFIYPMFQSGALYEGQYLLGTSIARPLIAKRMVDIAIAEGATAIAHGATGKGND 124 R+EFA DFI+PMFQ+GA+YEGQY LGTSIARPLIAKRMV+IA AE A A+AHGATGKGND Sbjct: 62 REEFARDFIFPMFQAGAIYEGQYYLGTSIARPLIAKRMVEIARAEKADAVAHGATGKGND 121 Query: 125 QVRFELNAAALSPSIKVIAPWRLEEFRSQFPGRAEMIAYAEANGIPVQASAAKPYSMDRN 184 QVRFEL AAAL+P ++VIAPWR + FR QFPGRAEMIAYAE N IPV ASA KPYSMDRN Sbjct: 122 QVRFELTAAALAPELQVIAPWRQDRFREQFPGRAEMIAYAEKNNIPVLASAKKPYSMDRN 181 Query: 185 LLHISYESGVLEDPWFDPSAPENKGMFLLSNAPEDAPDQPEYLELEFLKGDCVAL----- 239 LLHIS+E+G+LEDPWFD SA + + M++LS +PE+APD+ E++EL F KG+CVA+ Sbjct: 182 LLHISFEAGILEDPWFDASAEKAREMYVLSVSPEEAPDKAEHVELVFEKGNCVAIGYHDL 241 Query: 240 -----------------NGEPLSPLQVMEKLNELGGKHGIGRVDMVENRFVGMKSRGVYE 282 N L+PLQVM LN+LGGKHGIGRVD+VENRFVGMKSRGVYE Sbjct: 242 DSLLTDLKITGVSYDSDNHAKLNPLQVMRVLNKLGGKHGIGRVDLVENRFVGMKSRGVYE 301 Query: 283 TPGGTILFTAHRKMESITMDREVMNLRDSLITRYSTLVYNGFWFAPERLALQALVKESQK 342 TPGG IL AHR++ES+TMDREVM+LRDSLI +Y+TLVYNGFWFAPER ALQ+L+ ESQK Sbjct: 302 TPGGAILHFAHRQVESLTMDREVMHLRDSLIPKYATLVYNGFWFAPEREALQSLITESQK 361 Query: 343 NVTGTVRVKLYKGNIIGAGVKSPVSLYNPEIATMEADPTQAYDQGDATGFIRLNALRLKV 402 NVTGTVR+KLYKGNII AG KSP+SLYNP+IATMEADPT+AY+Q DATGFI LNALRLKV Sbjct: 362 NVTGTVRLKLYKGNIITAGRKSPLSLYNPDIATMEADPTKAYNQNDATGFIALNALRLKV 421 Query: 403 SAGV 406 ++ V Sbjct: 422 ASRV 425 >B1ZUD4.1 B1ZUD4_OPITP Argininosuccinate synthase EC=6.3.4.5 Length = 408 Score = 596 bits (1537), Expect = e-168, Method: Compositional matrix adjust. Identities = 283/397 (71%), Positives = 335/397 (84%), Gaps = 1/397 (0%) Query: 5 KIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELNGLEEKALATGASKVYIDDL 64 KIVLAYSGGLDTSVI+KWL+ETYDAEI+ F ADIGQ+EEL GL +KA TGASK Y DL Sbjct: 2 KIVLAYSGGLDTSVIVKWLRETYDAEIVTFAADIGQEEELKGLPQKARKTGASKHYTLDL 61 Query: 65 RDEFASDFIYPMFQSGALYEGQYLLGTSIARPLIAKRMVDIAIAEGATAIAHGATGKGND 124 +EFA DFIYPM ++ A+YEGQY LGTSIARPLIAK V+IA E A +AHGATGKGND Sbjct: 62 VEEFARDFIYPMIRANAIYEGQYYLGTSIARPLIAKAQVEIAKREKADTVAHGATGKGND 121 Query: 125 QVRFELNAAALSPSIKVIAPWRLEEFRSQFPGRAEMIAYAEANGIPVQASAAKPYSMDRN 184 Q RFEL AL P ++++APW++E+FR QFPGRAEMIAY + + IPV+AS KPYSMDRN Sbjct: 122 QCRFELTYMALDPKLQIVAPWKIEKFREQFPGRAEMIAYCQEHKIPVEASLKKPYSMDRN 181 Query: 185 LLHISYESGVLEDPWFDPSAPENKGMFLLSNAPEDAPDQPEYLELEFLKGDCVALNGEPL 244 LLHISYE+G+LEDPWFDP+ PENKGMF LS +PEDAP++ EY+ELEF+KG+CVA+NG+ L Sbjct: 182 LLHISYEAGILEDPWFDPTTPENKGMFKLSVSPEDAPNKAEYVELEFVKGNCVAVNGKKL 241 Query: 245 SPLQVMEKLNELGGKHGIGRVDMVENRFVGMKSRGVYETPGGTILFTAHRKMESITMDRE 304 SP V++ LN+LGGKHGIGRVD+VENRFVGMKSRGVYETPGGTIL HR++ES+TMDRE Sbjct: 242 SPAGVLKALNKLGGKHGIGRVDLVENRFVGMKSRGVYETPGGTILMQGHRQIESLTMDRE 301 Query: 305 VMNLRDSLITRYSTLVYNGFWFAPERLALQALVKESQKNVTGTVRVKLYKGNIIGAGVKS 364 VM+LRDSLI +Y+ LVY GFWFAPER ALQALV +SQ+NVTGTVR+KLYKGNII G KS Sbjct: 302 VMHLRDSLIPKYAELVYYGFWFAPEREALQALVDKSQENVTGTVRLKLYKGNIITCGRKS 361 Query: 365 PVSLYNPEIATMEADPTQAYDQGDATGFIRLNALRLK 401 SLY+ ++A+ME + Y+Q DATGFIRLN LRL+ Sbjct: 362 KYSLYDMKVASMEGVRSW-YNQSDATGFIRLNGLRLR 397 >C0AB13.1 C0AB13_9BACT Argininosuccinate synthase EC=6.3.4.5 Length = 408 Score = 591 bits (1523), Expect = e-167, Method: Compositional matrix adjust. Identities = 282/400 (70%), Positives = 334/400 (83%), Gaps = 1/400 (0%) Query: 5 KIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELNGLEEKALATGASKVYIDDL 64 KIVLAYSGGLDTSVI+KWLKETYDAEI+ F AD+GQ+EEL GL++KA TGASK Y DL Sbjct: 2 KIVLAYSGGLDTSVIVKWLKETYDAEIVTFAADVGQEEELKGLDKKAKKTGASKHYTLDL 61 Query: 65 RDEFASDFIYPMFQSGALYEGQYLLGTSIARPLIAKRMVDIAIAEGATAIAHGATGKGND 124 +EFA DFIYPM ++ A+YEGQY LGTSIARPLIAK V+IA E A +AHGATGKGND Sbjct: 62 VEEFARDFIYPMIRANAVYEGQYYLGTSIARPLIAKAQVEIARKEKADTVAHGATGKGND 121 Query: 125 QVRFELNAAALSPSIKVIAPWRLEEFRSQFPGRAEMIAYAEANGIPVQASAAKPYSMDRN 184 Q RFEL AL+P + +IAPW++EE+R FPGRAEMIAY E IPV+AS KPYSMDRN Sbjct: 122 QCRFELTYMALAPDLTIIAPWKIEEYRKLFPGRAEMIAYCEKYKIPVEASLKKPYSMDRN 181 Query: 185 LLHISYESGVLEDPWFDPSAPENKGMFLLSNAPEDAPDQPEYLELEFLKGDCVALNGEPL 244 LLHISYE+G+LEDPWFDP+ PENK MF LS +PEDAPD+ EY+EL+F +G+CVA+NG+ L Sbjct: 182 LLHISYEAGILEDPWFDPTTPENKAMFKLSVSPEDAPDKAEYVELDFEQGNCVAVNGKKL 241 Query: 245 SPLQVMEKLNELGGKHGIGRVDMVENRFVGMKSRGVYETPGGTILFTAHRKMESITMDRE 304 +P +V++ LN+LGGKHGIGRVD+VENRFVGMKSRGVYETPGGTIL AH+++ES+T+DRE Sbjct: 242 TPGKVLKTLNKLGGKHGIGRVDLVENRFVGMKSRGVYETPGGTILMQAHKQIESLTLDRE 301 Query: 305 VMNLRDSLITRYSTLVYNGFWFAPERLALQALVKESQKNVTGTVRVKLYKGNIIGAGVKS 364 V +LRDSLI +Y+ LVYNGFWFAPER ALQALV ESQK VTGTVR+KLYKGNII G KS Sbjct: 302 VEHLRDSLIPKYAELVYNGFWFAPEREALQALVDESQKFVTGTVRLKLYKGNIITCGRKS 361 Query: 365 PVSLYNPEIATMEADPTQAYDQGDATGFIRLNALRLKVSA 404 SLY+ +IA+ME + Y+Q DATGFIRLN LRL+ + Sbjct: 362 KYSLYDEKIASMEGVKSW-YNQSDATGFIRLNGLRLRARS 400 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.134 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,474,693,686 Number of extensions: 107020207 Number of successful extensions: 251481 Number of sequences better than 1.0e-05: 1544 Number of HSP's gapped: 246341 Number of HSP's successfully gapped: 1550 Length of query: 411 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 273 Effective length of database: 1,760,596,133 Effective search space: 480642744309 Effective search space used: 480642744309 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)