BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0514.0016.p (158 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0D2X2.1 C0D2X2_9CLOT Putative uncharacterized protein 160 4e-38 A8S9P1.1 A8S9P1_9FIRM Putative uncharacterized protein 149 9e-35 C0FM10.1 C0FM10_9CLOT Putative uncharacterized protein 145 1e-33 Q3ANJ2.1 Q3ANJ2_SYNSC Putative uncharacterized protein 133 5e-30 B3KHW8.1 B3KHW8_9BACI Glycosyl hydrolase BNR repeat-containing p... 132 1e-29 >C0D2X2.1 C0D2X2_9CLOT Putative uncharacterized protein Length = 386 Score = 160 bits (405), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 81/157 (51%), Positives = 107/157 (68%), Gaps = 1/157 (0%) Query: 1 VIEIAPGKLIGLFRSRSADNIYFAKSDDNGETWTEPVRTELPNNNSSISAIKLASGKLAV 60 V+E+ PG L RSR+ADNIY ++S D G+TWT+PV T LPNNNSSISA+KL SG++AV Sbjct: 213 VVELEPGHLAAFMRSRAADNIYRSESLDYGDTWTKPVPTVLPNNNSSISAVKLQSGRIAV 272 Query: 61 IYN-DLRFNDKPDITVWPFERCPVTVAISEDEGRTWPYRRHVETGEGFSGHKNLXXXXXX 119 YN P I WP RCPV VA+SED G T+P R++E GEG+ G +N Sbjct: 273 AYNPTCTPCPTPGIASWPGLRCPVAVALSEDGGLTFPMIRYMERGEGYMGDENKTNNRQY 332 Query: 120 EYPCMMQAADGSLHAAYSFGNRRTMKFVSFTEQWVTG 156 EYP +MQ DG LH A+++ +R ++K++SFTE+ V G Sbjct: 333 EYPYIMQGRDGRLHLAFAYKDRLSVKYMSFTEEDVMG 369 >A8S9P1.1 A8S9P1_9FIRM Putative uncharacterized protein Length = 386 Score = 149 bits (375), Expect = 9e-35, Method: Compositional matrix adjust. Identities = 79/159 (49%), Positives = 101/159 (63%), Gaps = 1/159 (0%) Query: 1 VIEIAPGKLIGLFRSRSADNIYFAKSDDNGETWTEPVRTELPNNNSSISAIKLASGKLAV 60 VIE+ PG L+ R+R A I+ ++S D GETWT P T LPNNNSSISA+KL SG++A+ Sbjct: 213 VIELEPGHLVAFMRNREAYRIHRSESFDWGETWTVPAPTPLPNNNSSISAVKLQSGRIAI 272 Query: 61 IYN-DLRFNDKPDITVWPFERCPVTVAISEDEGRTWPYRRHVETGEGFSGHKNLXXXXXX 119 YN N P WP RCPV VA+SED G T+P R +E GEG+ G +N Sbjct: 273 AYNPTCTPNPVPGKAAWPGLRCPVAVALSEDGGLTFPIIRWMERGEGYMGDENKTNNKQY 332 Query: 120 EYPCMMQAADGSLHAAYSFGNRRTMKFVSFTEQWVTGAE 158 EYP +MQ DG LH AY+ R+ +K+V F+EQ V GA+ Sbjct: 333 EYPYLMQGRDGMLHLAYAARTRQGIKYVRFSEQDVLGAK 371 >C0FM10.1 C0FM10_9CLOT Putative uncharacterized protein Length = 391 Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 76/157 (48%), Positives = 100/157 (63%), Gaps = 1/157 (0%) Query: 1 VIEIAPGKLIGLFRSRSADNIYFAKSDDNGETWTEPVRTELPNNNSSISAIKLASGKLAV 60 V+E+ PG L R+R A I+ ++S D GETW++P T LPNNNSSISA+KL SG++A+ Sbjct: 218 VVELEPGHLAAFMRNREAYRIHRSESFDWGETWSKPEPTPLPNNNSSISAVKLQSGRIAI 277 Query: 61 IYNDLRFND-KPDITVWPFERCPVTVAISEDEGRTWPYRRHVETGEGFSGHKNLXXXXXX 119 YN D +P WP RCPV VA+SED G T+P R +E GEGF G +N Sbjct: 278 AYNPTCTPDPQPGKAAWPGLRCPVAVALSEDGGLTFPIIRWMERGEGFIGDENKTNNKQY 337 Query: 120 EYPCMMQAADGSLHAAYSFGNRRTMKFVSFTEQWVTG 156 EYP +MQ DG +H AY+ R+ +K+V FTEQ + G Sbjct: 338 EYPYIMQGKDGMIHLAYAARTRQGVKYVRFTEQDILG 374 >Q3ANJ2.1 Q3ANJ2_SYNSC Putative uncharacterized protein Length = 415 Score = 133 bits (334), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 67/158 (42%), Positives = 93/158 (58%), Gaps = 9/158 (5%) Query: 8 KLIGLFRSRSADNIYFAKSDDNGETWTEPVRTELPNNNSSISAIKLASGKLAVIYNDLRF 67 +L+ FRSR AD IY + S D G TW+ P T+LPNNNSSI A LASG+LA+I+N F Sbjct: 247 QLLQFFRSRLADQIYRSVSSDGGHTWSAPEPTQLPNNNSSIQACWLASGRLAMIFNRFGF 306 Query: 68 NDKPDITV---------WPFERCPVTVAISEDEGRTWPYRRHVETGEGFSGHKNLXXXXX 118 P + WP R P+++AIS+D+G WP+ R ++TG GF G N Sbjct: 307 APDPGASEEPLKWGEARWPRTRWPLSIAISDDDGLQWPWIRDIDTGFGFCGPMNWDLNGQ 366 Query: 119 XEYPCMMQAADGSLHAAYSFGNRRTMKFVSFTEQWVTG 156 YP +++ G LH AYS+ R+ +++V+ EQ V G Sbjct: 367 LAYPTLIEGQPGELHVAYSWAGRQAIRYVTLREQEVIG 404 >B3KHW8.1 B3KHW8_9BACI Glycosyl hydrolase BNR repeat-containing protein Length = 362 Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 73/161 (45%), Positives = 101/161 (62%), Gaps = 12/161 (7%) Query: 1 VIEIAPGKLIGLFRSRSADNIYFAKSDDNGETWTEPVRTELPNNNSSISAIKLASGKLAV 60 V+E+ G L +FRSR AD IY + S D G+TW+EP +T LPNNNSSI KLA+G LA+ Sbjct: 199 VVELDGGTLFAVFRSRHADRIYGSVSKDFGKTWSEPAKTSLPNNNSSIQLAKLANGHLAI 258 Query: 61 IYND-------LRFNDKPDITVWPFERCPVTVAISEDEGRTWPYRRHVETGEGFSGHKNL 113 IYND R+ ++ + R P+TVAISED G+TWP+ ++V+ S ++ Sbjct: 259 IYNDSTMERDQYRWIERNGEWLKKTLRTPLTVAISEDGGKTWPHVKNVQ----MSDLEHK 314 Query: 114 XXXXXXEYPCMMQAADGSLHAAYSFGNRRTMKFVSFTEQWV 154 YP +M DGS+HAAYS+ R+ +K+V FTE+WV Sbjct: 315 EKQTGYSYPSIMGTKDGSIHAAYSY-LRKAIKYVRFTEEWV 354 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.133 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 969,471,046 Number of extensions: 37464611 Number of successful extensions: 66689 Number of sequences better than 1.0e-05: 111 Number of HSP's gapped: 66609 Number of HSP's successfully gapped: 114 Length of query: 158 Length of database: 3,060,696,203 Length adjustment: 119 Effective length of query: 39 Effective length of database: 1,939,595,418 Effective search space: 75644221302 Effective search space used: 75644221302 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 125 (52.8 bits)