BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0514.0015.p (198 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0D2X2.1 C0D2X2_9CLOT Putative uncharacterized protein 177 4e-43 C0FM10.1 C0FM10_9CLOT Putative uncharacterized protein 176 7e-43 A8S9P1.1 A8S9P1_9FIRM Putative uncharacterized protein 164 3e-39 B5S5X7.1 B5S5X7_RALSO Putative uncharacterized protein 145 2e-33 B2U6L0.1 B2U6L0_RALPJ Glycosyl hydrolase BNR repeat-containing p... 145 2e-33 >C0D2X2.1 C0D2X2_9CLOT Putative uncharacterized protein Length = 386 Score = 177 bits (449), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 87/176 (49%), Positives = 119/176 (67%), Gaps = 4/176 (2%) Query: 8 ELNDLTEDGKLYFNRRLGLVESLLPCD-LESSHACDLQELPNGDLLCVWFAGSDEGNSDV 66 +L LT DG +Y+N +G VE++LP +++H L EL NGD+LCVWFAGS EGN+DV Sbjct: 5 KLPGLTPDGTMYWNEEMGTVEAVLPPGGYKTAHGPGLLELENGDMLCVWFAGSFEGNADV 64 Query: 67 SIVMSRLNAGSDAWTPAVRISDDNGFSEQNPSLFLHPNGELWVVYTAQRARTGDESPEFN 126 +++ +RL G+D W V +S D SEQNPSLF P+G +W +YT+Q +R + N Sbjct: 65 NVICARLKKGADRWEEPVLVSHDPERSEQNPSLFSGPDGMVWAMYTSQLSRVEGKD---N 121 Query: 127 LQYTSKIYRKVSRDNGKTWGKAEVMFSREGSFCRQKIQILSSGRWIFENWICFNDD 182 +Q+TS I + S D G+TW E +F EGSFCRQ IQ+LS+GRWIF NWIC + + Sbjct: 122 MQFTSVIRCQKSADGGETWSDYETVFPEEGSFCRQPIQVLSNGRWIFGNWICTDSE 177 >C0FM10.1 C0FM10_9CLOT Putative uncharacterized protein Length = 391 Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 89/172 (51%), Positives = 112/172 (65%), Gaps = 4/172 (2%) Query: 8 ELNDLTEDGKLYFNRRLGLVESLLP-CDLESSHACDLQELPNGDLLCVWFAGSDEGNSDV 66 +L LT DG +Y N +G +E+L+P ++HA + ELPNGDLLC WFAG+ EG++DV Sbjct: 10 KLPGLTWDGTVYENEEMGTIEALIPNGGYPTAHAPAMVELPNGDLLCCWFAGTYEGSADV 69 Query: 67 SIVMSRLNAGSDAWTPAVRISDDNGFSEQNPSLFLHPNGELWVVYTAQRARTGDESPEFN 126 IV SRL AW P V IS D SEQNPSLF P+ +W +YTAQ R + N Sbjct: 70 HIVCSRLPKDGQAWLPPVDISSDPTRSEQNPSLFYGPDSAVWAMYTAQLDRQEGKD---N 126 Query: 127 LQYTSKIYRKVSRDNGKTWGKAEVMFSREGSFCRQKIQILSSGRWIFENWIC 178 +Q+TS + + S D G TWG E +F EG+FCRQ IQILS+GRWIF NWIC Sbjct: 127 MQFTSVVRCQKSTDGGLTWGPYETIFPEEGTFCRQPIQILSNGRWIFSNWIC 178 >A8S9P1.1 A8S9P1_9FIRM Putative uncharacterized protein Length = 386 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 83/172 (48%), Positives = 109/172 (63%), Gaps = 4/172 (2%) Query: 8 ELNDLTEDGKLYFNRRLGLVESLLPCD-LESSHACDLQELPNGDLLCVWFAGSDEGNSDV 66 +L LT DG +Y N +G +E+LLP ++HA + ELPNGDLLC WFAG+ EG++DV Sbjct: 5 KLPGLTWDGTVYENEEMGTLEALLPTGGWPTAHAPAMVELPNGDLLCCWFAGTYEGSADV 64 Query: 67 SIVMSRLNAGSDAWTPAVRISDDNGFSEQNPSLFLHPNGELWVVYTAQRARTGDESPEFN 126 I+ S L W V IS D SEQNPSLF P+ +W +YTAQ R + N Sbjct: 65 HIICSVLPHDGTKWLEPVNISGDPTRSEQNPSLFYGPDNAVWAMYTAQLDRVEGKD---N 121 Query: 127 LQYTSKIYRKVSRDNGKTWGKAEVMFSREGSFCRQKIQILSSGRWIFENWIC 178 +Q+T+ + + S D GKTWG +F EG+FCRQ IQ+LS+GRWIF NW+C Sbjct: 122 MQFTAVVRCQKSTDGGKTWGDYTTVFPEEGTFCRQPIQVLSNGRWIFANWLC 173 >B5S5X7.1 B5S5X7_RALSO Putative uncharacterized protein Length = 392 Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 70/151 (46%), Positives = 92/151 (60%), Gaps = 9/151 (5%) Query: 28 ESLLPCDLESSHACDLQELPNGDLLCVWFAGSDEGNSDVSIVMSRLNAGSDAWTPAVRIS 87 E+ LP +HA +L LPNGDLLC WF G+ EG DVSI +SRL AG W PAV++S Sbjct: 26 EAYLPTPCVQNHAANLHALPNGDLLCTWFGGTQEGIPDVSIYLSRLPAGGAEWQPAVKLS 85 Query: 88 DDNGFSEQNPSLFLHPNGELWVVYTAQRARTGDESPEFNLQYTSKIYRKVSRDNGKTWGK 147 DD SEQNP LF P G LW++YTAQ + Q T+ + R++S D G++WG Sbjct: 86 DDPTRSEQNPVLFTTPAGALWLIYTAQLS---------GHQNTAIVRRRISTDGGRSWGP 136 Query: 148 AEVMFSREGSFCRQKIQILSSGRWIFENWIC 178 E +F + G+F RQ I +LS G W ++C Sbjct: 137 IETLFEQAGTFVRQPIVVLSDGAWACPVFMC 167 >B2U6L0.1 B2U6L0_RALPJ Glycosyl hydrolase BNR repeat-containing protein Length = 391 Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 68/151 (45%), Positives = 93/151 (61%), Gaps = 9/151 (5%) Query: 28 ESLLPCDLESSHACDLQELPNGDLLCVWFAGSDEGNSDVSIVMSRLNAGSDAWTPAVRIS 87 E+ LP +HA +L LPNGDLLCVWF G+ EG DVSI +SRL AG+ W PA ++S Sbjct: 26 EAFLPTPCVQNHAANLHALPNGDLLCVWFGGTQEGIPDVSIYLSRLAAGTSEWQPATKLS 85 Query: 88 DDNGFSEQNPSLFLHPNGELWVVYTAQRARTGDESPEFNLQYTSKIYRKVSRDNGKTWGK 147 +D SEQNP LF P GELW++YTAQ + Q T+ + R++S D G++WG Sbjct: 86 EDTTRSEQNPVLFTTPTGELWLIYTAQLS---------GHQNTAIVRRRISTDGGRSWGP 136 Query: 148 AEVMFSREGSFCRQKIQILSSGRWIFENWIC 178 + +F + G+F RQ I +L G W ++C Sbjct: 137 IDTLFDQAGTFVRQPIVVLPDGAWACPVFLC 167 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.135 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,265,569,486 Number of extensions: 52362065 Number of successful extensions: 92575 Number of sequences better than 1.0e-05: 96 Number of HSP's gapped: 92553 Number of HSP's successfully gapped: 96 Length of query: 198 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 69 Effective length of database: 1,845,385,268 Effective search space: 127331583492 Effective search space used: 127331583492 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 127 (53.5 bits)