BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0514.0002.p (1061 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D8L1.1 B1D8L1_9BACL Acriflavin resistance protein 1457 0.0 Q5KWT2.1 Q5KWT2_GEOKA Hypothetical conserved protein 382 e-104 C3IXB0.1 C3IXB0_9BACI Acriflavin resistance protein 382 e-103 B7Y5Y0.1 B7Y5Y0_9BACI Acriflavin resistance protein 382 e-103 C5D506.1 C5D506_9BACI Acriflavin resistance protein 379 e-103 >B1D8L1.1 B1D8L1_9BACL Acriflavin resistance protein Length = 1038 Score = 1457 bits (3773), Expect = 0.0, Method: Compositional matrix adjust. Identities = 722/1031 (70%), Positives = 853/1031 (82%), Gaps = 1/1031 (0%) Query: 22 MKKWVEAVMQRAAILTIVVVLLMAWGAVSAFQMQRDYLPGINNTTLMVSLRASAYQADQV 81 MK+ +EAVMQR+AI+ I VVL++AWGAVSA QMQRDYLPGINNTTLMVSLRAS+YQADQ+ Sbjct: 1 MKRLIEAVMQRSAIILISVVLILAWGAVSALQMQRDYLPGINNTTLMVSLRASSYQADQI 60 Query: 82 KRDITTPIEQAIRKTNGILNVETTSYDGGLLMNLYYPMNYNMDKAEQDIRMALGDADLPA 141 KRDIT P+E AIRKTNGI N+ETTSYDGG+LMN+YYPM+Y+M KAE I+ AL DA LP Sbjct: 61 KRDITAPLEDAIRKTNGITNLETTSYDGGVLMNIYYPMDYDMGKAENAIKQALNDAALPD 120 Query: 142 NVNAPTVTRLTTSTFPVLSYSLTANNEKVDDDTLRSTVQAGIVNQLKSVPGVSDVQAVGG 201 VN P VTRLT+STFP+LSYSLT+N+ K+DD TL+S+ Q IVNQLKSVPGVSDVQ VGG Sbjct: 121 GVNKPAVTRLTSSTFPILSYSLTSNSSKIDDLTLQSSTQTDIVNQLKSVPGVSDVQTVGG 180 Query: 202 AKNGYVVLIHTKDLSAAGLTLDDFNKSVSAAVPNLQGYIQNVKSPFPVRVEGWDMTEQDV 261 A GYVV++ KDL A LTLDDFNKS++A VP+LQG I N+K+ FP++VEGWD+TE + Sbjct: 181 ANKGYVVVLRMKDLVANKLTLDDFNKSITADVPSLQGNIANIKASFPIKVEGWDLTEDQL 240 Query: 262 NNIVIKNSDGVSVPLSAIASVSRSLNDVQTMSRTDGKASVLINVIKTSGANITDVAKQVK 321 + ++IKN DG SVPLSAIA+V SL DV+T+SRT+GKA+V++NVIKT A ITDVA QVK Sbjct: 241 SKLMIKNKDGNSVPLSAIAAVYPSLTDVKTVSRTNGKANVMLNVIKTPTATITDVANQVK 300 Query: 322 TRVAALPAVEGGNVTMTLTGDRAHDLNASLLGLVREGLLGCVFSMLCVLFFFRNVRSTLL 381 RV +P V+ G+V M L DRAHDLN+SLLGLVREGLLGCVFSMLCVLFFFRNVRSTLL Sbjct: 301 HRVNQIPVVQSGDVKMELLTDRAHDLNSSLLGLVREGLLGCVFSMLCVLFFFRNVRSTLL 360 Query: 382 IAVSLPISLLATTAILKAMGVTLNILTVSGLIVAMGRIVDDAIVILDNMHRKMQEKKDQG 441 IAV+LPISLLATTA+LKAMG+TLNILTVSGLIVAMGRIVDDAIVILDNM+R++QE K + Sbjct: 361 IAVTLPISLLATTAVLKAMGITLNILTVSGLIVAMGRIVDDAIVILDNMYRRIQESKGKP 420 Query: 442 ALHVLAESVVEMLPAIFGSTATTVAVYAPIALVGGIIGASYSGFAWSVVIALAVSFLVAM 501 L VL+ +VVEMLPAIF STATT+AVY PIALVGGIIGASYSGFAWSVVIAL VSFLVAM Sbjct: 421 VLGVLSAAVVEMLPAIFASTATTIAVYVPIALVGGIIGASYSGFAWSVVIALTVSFLVAM 480 Query: 502 LVIPAFAYMGWHKPGGKAVTLEPAMKPFLTTALKHKKTVLGVSLVIFIAAAFFASQLPFS 561 +VIP FA MGW KP +AVTLEP MKP L +ALK KKTV+ +SL++F AAA F SQLPFS Sbjct: 481 IVIPTFAMMGWSKPKAEAVTLEPLMKPLLLSALKRKKTVVSISLILFAAAAIFGSQLPFS 540 Query: 562 LLPSTASGQVAVQLELPKGTALSEVDKAVQNVETVLKQDSQVAXXXXXXXXXXXPQADDV 621 LLPSTASGQVAV++ELPKGT LSEVDK V+ VE L+ ++ +A P ADDV Sbjct: 541 LLPSTASGQVAVKVELPKGTPLSEVDKEVKVVENELQHNAGIASYTAAFGSSFTPTADDV 600 Query: 622 FDQGGGYIQQPNIANLSVALKDQKQVNSYINSLQERLGNQQGVAAVTITNQNIAGDDSTI 681 FDQGGG+IQQPN+ANLS+ LKD+K V + I SLQ L G A+T+TNQNIAGDDSTI Sbjct: 601 FDQGGGFIQQPNVANLSIQLKDKKSVKAIIPSLQSDLNKVSGQGAITVTNQNIAGDDSTI 660 Query: 682 NIMLSGSDAGTLDKAASTVRSGLAGIEGLSVVGKTDLTNGIPKFSIALDRGKVLKAGVSR 741 IML+G+D TL+K A+ VR+ L I GLSV G+TDLTNG PK+ +++D+ K L G+ Sbjct: 661 KIMLTGADQLTLEKTAAQVRAKLVQIPGLSVTGQTDLTNGNPKYELSIDKDKALADGIDP 720 Query: 742 NDINKVLSRYMTKGKDFDISVSSGTGIIPVDVYLDPVKMGQAQAGGPLPVYTPDQVLASL 801 +++NK+L RY +K KDFDIS S+GTG IPVDVY+D VK G A +PVY+P+QVLASL Sbjct: 721 DEVNKLLLRYTSKAKDFDISTSTGTGTIPVDVYIDSVKEGVANDQS-IPVYSPEQVLASL 779 Query: 802 AAETVKGKDGTVYRLDQLGTLQRSDAGSSIQERDGQPYTVVQARIVSSDTSGVSKAVNKV 861 AAETVKG G YRLD T+Q+SDA SSIQERDG+P +VVQA+I S + S VSK V+K Sbjct: 780 AAETVKGNGGKAYRLDSFVTMQKSDALSSIQERDGEPVSVVQAQITSGNMSKVSKDVDKT 839 Query: 862 LRTTNLPEGVTYSLGGITQQVTQMIFEMIIAVVLSIFLVLLITSFVFRSWRAPIAVLISI 921 L+ LPEGV+YSLGGITQQVTQMI E++IAV +SI LVLLITS VF+ W+AP+AVL+SI Sbjct: 840 LKNLQLPEGVSYSLGGITQQVTQMIIEIVIAVAVSILLVLLITSMVFKGWKAPLAVLLSI 899 Query: 922 PLALSGVVLALYTVHGQWNLAALIGVLMLTGIVVTNGIVLIDKIERNRREGLGLRDAVMQ 981 PLALSG+V++LY +HGQWNLAA IGVLMLTGIVVTNGIVLIDKIERNR+EG+ LRDAV+Q Sbjct: 900 PLALSGIVISLYAIHGQWNLAAFIGVLMLTGIVVTNGIVLIDKIERNRKEGMELRDAVIQ 959 Query: 982 GSLSRVRPIFMTAATTILTLVPLTLSGDDGTVISKVLGVVVIGGMITSTLNSFVVIPILY 1041 GSLSRVRPIFMTA TTILTL+PL LS TVIS+VLG+VVIGGMITSTLNSF +IPI+Y Sbjct: 960 GSLSRVRPIFMTAGTTILTLIPLALSHSADTVISQVLGIVVIGGMITSTLNSFFMIPIIY 1019 Query: 1042 EAMNRKKFREA 1052 E M + R++ Sbjct: 1020 EWMLGRTARKS 1030 >Q5KWT2.1 Q5KWT2_GEOKA Hypothetical conserved protein Length = 1015 Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust. Identities = 305/1038 (29%), Positives = 518/1038 (49%), Gaps = 66/1038 (6%) Query: 30 MQRAAILTIVVVLLMAWGAVSAFQMQRDYLPGINNTTLMVSLRASAYQADQVKRDITTPI 89 ++ AA + + LLM G S ++ D LP I L + + V ++T + Sbjct: 9 LKNAAAVFVCSFLLMFLGLYSFSSLKVDLLPNIEFPQLSIEVVYPGASPQDVNEEVTAKL 68 Query: 90 EQAIRKTNGILNVETTSYDGGLLMNLYYPMNYNMDKAEQDIRMALGDADLPANVNAPTVT 149 E+ ++ +G+ ++++SY+G +MNL +P +M+K E+ + + A LP NV V Sbjct: 69 EEKLKSLDGLKQMQSSSYEGMAVMNLEFPFRTDMEKMERQVESLIDKAGLPDNVQT-EVN 127 Query: 150 RLTTSTFPVLSYSLTANNEKVDDDTLRSTVQAGIVNQLKSVPGVSDVQAVGGAKNGYVVL 209 R + + PV + SL A N L++ ++ ++ +L + GV+ V G ++ + Sbjct: 128 RFSFGSIPVFNISLFAKN----GTDLQTLLETEVIPELNKIDGVNSVSIGGDSERLIRIT 183 Query: 210 IHTKDLSAAGLTLDDFNKSVSAAVPNL-QGYIQNVKSPFPVRVEGWDMTEQDVNNI---- 264 + K + AGL L + ++ V G +Q PVRVE T ++ N+ Sbjct: 184 VDRKKAAQAGLNLSEIKNQINEKVLAFPAGTLQTDTWQIPVRVEEKLNTIHELKNLKLVP 243 Query: 265 --VIKNSDGV----SVPLSAIASVSRSLNDVQTMSRTDGKASVLINVIKTSGANITDVAK 318 V ++G+ SV L IA++ +N+ +R + K S+ + V K AN +VA Sbjct: 244 TAVPMAANGLQRVASVKLGDIATIEE-VNEQSEFTRYNLKPSLSMAVTKKQDANTIEVAD 302 Query: 319 QVKTRVAALPAVEGGNVTMTLTGDRAHDLNASLLGLVREGLLGCVFSMLCVLFFFRNVRS 378 QV + L + + ++ D + + S+ LVREGLLG +F+ L VL F RNVR+ Sbjct: 303 QV---IKVLNSYKH-QFDYSIGFDSSAGIKQSVESLVREGLLGALFASLAVLLFLRNVRA 358 Query: 379 TLLIAVSLPISLLATTAILKAMGVTLNILTVSGLIVAMGRIVDDAIVILDNMHRKMQEKK 438 T++ VS+P+SLL + L M +TLN++T+ G+ VA+GR+VDD+IV+++N+ R+++ +K Sbjct: 359 TVIAIVSIPLSLLVSAIFLNRMDITLNVMTLGGMAVAVGRVVDDSIVVIENIFRRVRREK 418 Query: 439 DQGALHVLAESVVEMLPAIFGSTATTVAVYAPIALVGGIIGASYSGFAWSVVIALAVSFL 498 + ++ +S E++ AI ST TTV V+ P+ LVGGI G + FA ++ AL S L Sbjct: 419 TGMSDDLVEQSTKEIVKAIVSSTITTVVVFLPLGLVGGITGEFFLPFALTITFALLASLL 478 Query: 499 VAMLVIPAFAYMGWHK--PGGKAVTLEPAMKPFLTTALKHKKTVLGVSLVIFIAAAFFAS 556 VA+ V+P A + + P K L+ + AL HK V +S+V+ + + Sbjct: 479 VAVTVVPILAKFSFRRVPPEEKEGALQRLYGRIIEWALNHKAIVFVLSVVLLVGSLTLVP 538 Query: 557 QLPFSLLPSTASGQVAVQLELPKGTALSEVDKAVQNVETVLKQDSQVAXXXXXXXXXXXP 616 +L F+ LP+ + +ELP T++++ + +E + + S V Sbjct: 539 KLGFTFLPNEEQKTLVASIELPASTSVAKTNDVSLEMEKMFLKRSDVESVTAAVGSRD-- 596 Query: 617 QADDVFDQGGGYIQQPNIANLSVALKDQKQVNSYINSLQE---RLGNQQGVAAVTITNQN 673 F G +++PN A+ + LKD + ++ R+ NQ A + Sbjct: 597 -----FRTG---LKRPNQASYYILLKDSADTAKTVAVFEKEMRRIANQLAPGAKVGVQEM 648 Query: 674 IAG---DDSTINIMLSGSDAGTLDKAASTVRSGLAGIEGLSVVGKTDLTNGIPKFSIALD 730 +G ++ +NI L +D L AA V + L + + V +LT + +A+D Sbjct: 649 SSGGPPTNNNVNIDLYSNDLEALQTAAKQVETYLKQRDDVKDV-TNNLTEKQKQVIVAID 707 Query: 731 RGKVLKAGVSRNDINKVLSRYMTKGKDFDISVSSGTGIIPVDVYLDPVKMGQAQAGGPLP 790 K GVS G +V+ T PVDV +K+G L Sbjct: 708 PEKAAAYGVS--------------GMQLLGAVADATK--PVDV--GTLKLGGKDEQVEL- 748 Query: 791 VYTPDQVLAS---LAAETVKGKDGTVYRLDQLGTLQRSDAGSSIQERDGQPYTVVQARIV 847 + D+ L S L + ++G V L + ++ +D +SIQ+ DG+ + V A+IV Sbjct: 749 --SYDETLGSIDELKELPIVTRNG-VIPLSAVAEVKEADVYTSIQKLDGKVFARVSAQIV 805 Query: 848 SSDTSGVSKAVNKVLRTTNLPEGVTYSLGGITQQVTQMIFEMIIAVVLSIFLVLLITSFV 907 + V+ ++K + +P VT GG + + Q E+ +A+ +I LV L Sbjct: 806 GDNIQKVTNDISKHVNDLKIPSDVTVKTGGGSDETVQTFRELGVAMAAAIGLVYLTMLIT 865 Query: 908 FRSWRAPIAVLISIPLALSGVVLALYTVHGQWNLAALIGVLMLTGIVVTNGIVLIDKIER 967 F R P+ +L S+ G + ALY +++ +IG+LML GIV TN IVL+D+I + Sbjct: 866 FGKVRVPLIILSSLLFVPIGSLFALYVADEPLSISVMIGLLMLIGIVTTNAIVLVDRIGQ 925 Query: 968 NRREG-LGLRDAVMQGSLSRVRPIFMTAATTILTLVPLTLSGDDGTVISKVLGVVVIGGM 1026 NR + + +R A+++ +R+RPI MTA T+ L+PL L+ + GT+ISK L + VIGG+ Sbjct: 926 NREQKRMTVRSAIIEAGKTRLRPILMTAFATVTALIPLALTNEAGTLISKGLAITVIGGL 985 Query: 1027 ITSTLNSFVVIPILYEAM 1044 +STL + V IP +YEA Sbjct: 986 TSSTLLTLVFIPAMYEAF 1003 >C3IXB0.1 C3IXB0_9BACI Acriflavin resistance protein Length = 1015 Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust. Identities = 305/1038 (29%), Positives = 517/1038 (49%), Gaps = 66/1038 (6%) Query: 30 MQRAAILTIVVVLLMAWGAVSAFQMQRDYLPGINNTTLMVSLRASAYQADQVKRDITTPI 89 ++ AA + + L M G S ++ D LP I L + V ++T + Sbjct: 9 LKNAAAVFVCSFLFMFLGLYSFSSLKVDLLPNIEFPQLSIEAVYPGASPQDVNEEVTAKL 68 Query: 90 EQAIRKTNGILNVETTSYDGGLLMNLYYPMNYNMDKAEQDIRMALGDADLPANVNAPTVT 149 E+ ++ +G+ ++++SY+G +MNL +P +M+K E+ + + A LP +V V Sbjct: 69 EEKLKSLDGLKQMQSSSYEGMAVMNLEFPFRTDMEKMERQVESLIDKAGLPDHVQT-EVN 127 Query: 150 RLTTSTFPVLSYSLTANNEKVDDDTLRSTVQAGIVNQLKSVPGVSDVQAVGGAKNGYVVL 209 R + + PV + SL A NE L++ ++ ++ +L + GV+ V G ++ + Sbjct: 128 RFSFGSIPVFNISLFAKNET----DLQTLLETEVIPELNKIDGVNSVSIGGDSERLIRIT 183 Query: 210 IHTKDLSAAGLTLDDFNKSVSAAVPNL-QGYIQNVKSPFPVRVEGWDMTEQDVNNI---- 264 + K + AGLTL + ++ V G +Q PVRVE T ++ N+ Sbjct: 184 VDRKKAAQAGLTLSEIKNQINEKVLAFPAGTLQTDTWQIPVRVEEKLNTIHELKNLKLVP 243 Query: 265 --VIKNSDGVS----VPLSAIASVSRSLNDVQTMSRTDGKASVLINVIKTSGANITDVAK 318 V ++G+ V L IA++ +N+ +R + K S+ + V K AN +VA Sbjct: 244 TAVPMAANGLQRVAPVKLGDIATIEE-VNEQSEFTRYNLKPSLSMAVTKKQDANTIEVAD 302 Query: 319 QVKTRVAALPAVEGGNVTMTLTGDRAHDLNASLLGLVREGLLGCVFSMLCVLFFFRNVRS 378 QV + L + + ++ D + + S+ LVREGLLG +F+ L VL F RNVR+ Sbjct: 303 QV---INVLNSYKH-QFDYSIGFDSSAGIKQSVESLVREGLLGALFASLAVLLFLRNVRA 358 Query: 379 TLLIAVSLPISLLATTAILKAMGVTLNILTVSGLIVAMGRIVDDAIVILDNMHRKMQEKK 438 T++ VS+P+SLL + L M +TLN++T+ G+ VA+GR+VDD+IV+++N+ R+++ +K Sbjct: 359 TVIAIVSIPLSLLVSAIFLNRMDITLNVMTLGGMAVAVGRVVDDSIVVIENIFRRVRREK 418 Query: 439 DQGALHVLAESVVEMLPAIFGSTATTVAVYAPIALVGGIIGASYSGFAWSVVIALAVSFL 498 + ++ +S E++ AI ST TTV V+ P+ LVGGI G + FA ++ AL S L Sbjct: 419 TGMSDDLVEQSTKEIVKAIVSSTITTVVVFLPLGLVGGITGEFFLPFALTITFALLASLL 478 Query: 499 VAMLVIPAFAYMGWHK--PGGKAVTLEPAMKPFLTTALKHKKTVLGVSLVIFIAAAFFAS 556 VA+ V+P A + + P K L+ + AL HK V +S+V+ + + Sbjct: 479 VAVTVVPILAKFSFRRVPPEEKEGALQRLYGRIIEWALNHKAIVFVLSVVLLVGSLALVP 538 Query: 557 QLPFSLLPSTASGQVAVQLELPKGTALSEVDKAVQNVETVLKQDSQVAXXXXXXXXXXXP 616 +L F+ LP+ + +ELP T++ + + +E + + S V Sbjct: 539 KLGFTFLPNEEQKTLVASIELPASTSVVKTNDVSLEMEKMFLKRSDVESVTAAVGSRD-- 596 Query: 617 QADDVFDQGGGYIQQPNIANLSVALKDQKQVNSYINSLQE---RLGNQQGVAAVTITNQN 673 F G +++PN A+ + LKD + L++ R+ NQ A + Sbjct: 597 -----FRTG---LKRPNQASYYILLKDSADTAKIVAVLEKEMRRIANQLAPGAKVGVQEM 648 Query: 674 IAG---DDSTINIMLSGSDAGTLDKAASTVRSGLAGIEGLSVVGKTDLTNGIPKFSIALD 730 +G ++ +NI L +D L AA V + L + + V +LT + +A+D Sbjct: 649 SSGGPPTNNNVNIDLYSNDLEALQTAAKQVETYLKQRDDVKDV-TNNLTEKQKQVIVAID 707 Query: 731 RGKVLKAGVSRNDINKVLSRYMTKGKDFDISVSSGTGIIPVDVYLDPVKMGQAQAGGPLP 790 K GVS G +V+ T PVDV +K+G L Sbjct: 708 PEKAAAYGVS--------------GMQLLGAVADATK--PVDV--GTLKLGGKDEQVEL- 748 Query: 791 VYTPDQVLAS---LAAETVKGKDGTVYRLDQLGTLQRSDAGSSIQERDGQPYTVVQARIV 847 + D+ L S L + ++G V L + ++ +D +SIQ+ DG+ + V A+IV Sbjct: 749 --SYDETLGSIDELKELPIVTRNG-VIPLSAVAEVKEADVYTSIQKLDGKVFARVSAQIV 805 Query: 848 SSDTSGVSKAVNKVLRTTNLPEGVTYSLGGITQQVTQMIFEMIIAVVLSIFLVLLITSFV 907 + V+ ++K + +P VT GG + + Q E+ +A+ +I LV L Sbjct: 806 GDNIQKVTNDISKHVNDLKIPSDVTVKTGGGSDETVQTFRELGVAMAAAIGLVYLTMLIT 865 Query: 908 FRSWRAPIAVLISIPLALSGVVLALYTVHGQWNLAALIGVLMLTGIVVTNGIVLIDKIER 967 F R P+ +L S+ G + ALY +++ +IG+LML GIV TN IVL+D+I + Sbjct: 866 FGKVRVPLIILSSLLFVPIGSLFALYVADEPLSISVMIGLLMLIGIVTTNAIVLVDRIGQ 925 Query: 968 NRREG-LGLRDAVMQGSLSRVRPIFMTAATTILTLVPLTLSGDDGTVISKVLGVVVIGGM 1026 NR + + +R A+++ +R+RPI MTA T+ L+PL L+ + GT+ISK L + VIGG+ Sbjct: 926 NREQKRMTVRSAIIEAGKTRLRPILMTAFATVTALIPLALTNEAGTLISKGLAITVIGGL 985 Query: 1027 ITSTLNSFVVIPILYEAM 1044 +STL + V IP +YEA Sbjct: 986 TSSTLLTLVFIPAMYEAF 1003 >B7Y5Y0.1 B7Y5Y0_9BACI Acriflavin resistance protein Length = 1015 Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust. Identities = 305/1038 (29%), Positives = 517/1038 (49%), Gaps = 66/1038 (6%) Query: 30 MQRAAILTIVVVLLMAWGAVSAFQMQRDYLPGINNTTLMVSLRASAYQADQVKRDITTPI 89 ++ AA + + L M G S ++ D LP I L + V ++T + Sbjct: 9 LKNAAAVFVCSFLFMFLGLYSFSSLKVDLLPNIEFPQLSIEAVYPGASPQDVNEEVTAKL 68 Query: 90 EQAIRKTNGILNVETTSYDGGLLMNLYYPMNYNMDKAEQDIRMALGDADLPANVNAPTVT 149 E+ ++ +G+ ++++SY+G +MNL +P +M+K E+ + + A LP +V V Sbjct: 69 EEKLKSLDGLKQMQSSSYEGMAVMNLEFPFRTDMEKMERQVESLIDKAGLPDHVQT-EVN 127 Query: 150 RLTTSTFPVLSYSLTANNEKVDDDTLRSTVQAGIVNQLKSVPGVSDVQAVGGAKNGYVVL 209 R + + PV + SL A NE L++ ++ ++ +L + GV+ V G ++ + Sbjct: 128 RFSFGSIPVFNISLFAKNET----DLQTLLETEVIPELNKIDGVNSVSIGGDSERLIRIT 183 Query: 210 IHTKDLSAAGLTLDDFNKSVSAAVPNL-QGYIQNVKSPFPVRVEGWDMTEQDVNNI---- 264 + K + AGLTL + ++ V G +Q PVRVE T ++ N+ Sbjct: 184 VDRKKAAQAGLTLSEIKNQINEKVLAFPAGTLQTDTWQIPVRVEEKLNTIHELKNLKLVP 243 Query: 265 --VIKNSDGVS----VPLSAIASVSRSLNDVQTMSRTDGKASVLINVIKTSGANITDVAK 318 V ++G+ V L IA++ +N+ +R + K S+ + V K AN +VA Sbjct: 244 TAVPMAANGLQRVAPVKLGDIATIEE-VNEQSEFTRYNLKPSLSMAVTKKQDANTIEVAD 302 Query: 319 QVKTRVAALPAVEGGNVTMTLTGDRAHDLNASLLGLVREGLLGCVFSMLCVLFFFRNVRS 378 QV + L + + ++ D + + S+ LVREGLLG +F+ L VL F RNVR+ Sbjct: 303 QV---INVLNSYKH-QFDYSIGFDSSAGIKQSVESLVREGLLGALFASLAVLLFLRNVRA 358 Query: 379 TLLIAVSLPISLLATTAILKAMGVTLNILTVSGLIVAMGRIVDDAIVILDNMHRKMQEKK 438 T++ VS+P+SLL + L M +TLN++T+ G+ VA+GR+VDD+IV+++N+ R+++ +K Sbjct: 359 TVIAIVSIPLSLLVSAIFLNRMDITLNVMTLGGMAVAVGRVVDDSIVVIENIFRRVRREK 418 Query: 439 DQGALHVLAESVVEMLPAIFGSTATTVAVYAPIALVGGIIGASYSGFAWSVVIALAVSFL 498 + ++ +S E++ AI ST TTV V+ P+ LVGGI G + FA ++ AL S L Sbjct: 419 TGMSDDLVEQSTKEIVKAIVSSTITTVVVFLPLGLVGGITGEFFLPFALTITFALLASLL 478 Query: 499 VAMLVIPAFAYMGWHK--PGGKAVTLEPAMKPFLTTALKHKKTVLGVSLVIFIAAAFFAS 556 VA+ V+P A + + P K L+ + AL HK V +S+V+ + + Sbjct: 479 VAVTVVPILAKFSFRRVPPEEKEGALQRLYGRIIEWALNHKAIVFVLSVVLLVGSLALVP 538 Query: 557 QLPFSLLPSTASGQVAVQLELPKGTALSEVDKAVQNVETVLKQDSQVAXXXXXXXXXXXP 616 +L F+ LP+ + +ELP T++ + + +E + + S V Sbjct: 539 KLGFTFLPNEEQKTLVASIELPASTSVVKTNDVSLEMEKMFLKRSDVESVTAAVGSRD-- 596 Query: 617 QADDVFDQGGGYIQQPNIANLSVALKDQKQVNSYINSLQE---RLGNQQGVAAVTITNQN 673 F G +++PN A+ + LKD + L++ R+ NQ A + Sbjct: 597 -----FRTG---LKRPNQASYYILLKDSADTAKIVAVLEKEMRRIANQLAPGAKVGVQEM 648 Query: 674 IAG---DDSTINIMLSGSDAGTLDKAASTVRSGLAGIEGLSVVGKTDLTNGIPKFSIALD 730 +G ++ +NI L +D L AA V + L + + V +LT + +A+D Sbjct: 649 SSGGPPTNNNVNIDLYSNDLEALQTAAKQVETYLKQRDDVKDV-TNNLTEKQKQVIVAID 707 Query: 731 RGKVLKAGVSRNDINKVLSRYMTKGKDFDISVSSGTGIIPVDVYLDPVKMGQAQAGGPLP 790 K GVS G +V+ T PVDV +K+G L Sbjct: 708 PEKAAAYGVS--------------GMQLLGAVADATK--PVDV--GTLKLGGKDEQVEL- 748 Query: 791 VYTPDQVLAS---LAAETVKGKDGTVYRLDQLGTLQRSDAGSSIQERDGQPYTVVQARIV 847 + D+ L S L + ++G V L + ++ +D +SIQ+ DG+ + V A+IV Sbjct: 749 --SYDETLGSIDELKELPIVTRNG-VIPLSAVAEVKEADVYTSIQKLDGKVFARVSAQIV 805 Query: 848 SSDTSGVSKAVNKVLRTTNLPEGVTYSLGGITQQVTQMIFEMIIAVVLSIFLVLLITSFV 907 + V+ ++K + +P VT GG + + Q E+ +A+ +I LV L Sbjct: 806 GDNIQKVTNDISKHVNDLKIPSDVTVKTGGGSDETVQTFRELGVAMAAAIGLVYLTMLIT 865 Query: 908 FRSWRAPIAVLISIPLALSGVVLALYTVHGQWNLAALIGVLMLTGIVVTNGIVLIDKIER 967 F R P+ +L S+ G + ALY +++ +IG+LML GIV TN IVL+D+I + Sbjct: 866 FGKVRVPLIILSSLLFVPIGSLFALYVADEPLSISVMIGLLMLIGIVTTNAIVLVDRIGQ 925 Query: 968 NRREG-LGLRDAVMQGSLSRVRPIFMTAATTILTLVPLTLSGDDGTVISKVLGVVVIGGM 1026 NR + + +R A+++ +R+RPI MTA T+ L+PL L+ + GT+ISK L + VIGG+ Sbjct: 926 NREQKRMTVRSAIIEAGKTRLRPILMTAFATVTALIPLALTNEAGTLISKGLAITVIGGL 985 Query: 1027 ITSTLNSFVVIPILYEAM 1044 +STL + V IP +YEA Sbjct: 986 TSSTLLTLVFIPAMYEAF 1003 >C5D506.1 C5D506_9BACI Acriflavin resistance protein Length = 1016 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 291/1038 (28%), Positives = 518/1038 (49%), Gaps = 69/1038 (6%) Query: 30 MQRAAILTIVVVLLMAWGAVSAFQMQRDYLPGINNTTLMVSLRASAYQADQVKRDITTPI 89 ++ AA + I+ LL+ G S ++ D LP I L + + + +T+ + Sbjct: 9 LKNAAAIFIISFLLIVGGIYSFSSLKVDLLPNIEFPQLSIEIVYPGASPQDINDQVTSKL 68 Query: 90 EQAIRKTNGILNVETTSYDGGLLMNLYYPMNYNMDKAEQDIRMALGDADLPANVNAPTVT 149 E+ ++ G+ ++++SY+ ++NL +P + +MD+ E+ + + DA LP NV + Sbjct: 69 EEKLKSIEGLKQMQSSSYESIAIINLEFPFHTDMDEVERQVDTLIKDAKLPENVQT-KIN 127 Query: 150 RLTTSTFPVLSYSLTANNEKVDDDTLRSTVQAGIVNQLKSVPGVSDVQAVGGAKNGYV-V 208 R + T P+ + SL A D L+ +++ ++ +L + G++ V +VGG K V + Sbjct: 128 RFSFGTLPIFNISLFAKK----DVDLQKILESEVIPELNKINGINSV-SVGGMKEEVVQI 182 Query: 209 LIHTKDLSAAGLTLDDFNKSVSAAVPNL-QGYIQNVKSPFPVRVEGWDMTEQDVNNIVIK 267 + + AGLTL ++ + G + P+RV+ T +++ N+ + Sbjct: 183 TVDKQKALQAGLTLSQIKDQINEKYISFPAGSVHTDALQIPIRVQEKLETVKELENMTLT 242 Query: 268 NSDGVSVP----------LSAIASVSRSLNDVQTMSRTDGKASVLINVIKTSGANITDVA 317 + S P L IA++ ++ D +R + K S+ + V K AN +VA Sbjct: 243 SPFVQSAPDAPQIKPAIKLKDIATI-ETVADRSEFTRYNLKESLSMAVTKKQDANTVEVA 301 Query: 318 KQVKTRVAALPAVEGGNVTMTLTGDRAHDLNASLLGLVREGLLGCVFSMLCVLFFFRNVR 377 +V + L + + T+ D A + S+ LVREGLLG +F+ + VL F RNVR Sbjct: 302 DKV---IHVLDSYKD-QFDYTIGFDSAEGIKKSVESLVREGLLGALFASISVLVFLRNVR 357 Query: 378 STLLIAVSLPISLLATTAILKAMGVTLNILTVSGLIVAMGRIVDDAIVILDNMHRKMQEK 437 +T++ VS+P+SLL + L M ++LN++T+ G+ VA+GR+VDD+IV+++N+ R++++ Sbjct: 358 ATIIAIVSIPLSLLVASIFLNRMDISLNVMTLGGMAVAVGRVVDDSIVVIENIFRRVRKA 417 Query: 438 KDQGALHVLAESVVEMLPAIFGSTATTVAVYAPIALVGGIIGASYSGFAWSVVIALAVSF 497 K ++ +S E+L AI ST TTV V+ P+ VGGI G + FA ++V AL +S Sbjct: 418 KTGMTDELIEDSTKEILKAITSSTITTVVVFLPLGFVGGITGEFFLPFALTIVFALFMSL 477 Query: 498 LVAMLVIPAFAYMGWHK--PGGKAVTLEPAMKPFLTTALKHKKTVLGVSLVIFIAAAFFA 555 +VA+ ++P A + K P K L+ + +L K +L +S+V+ + Sbjct: 478 IVAVTIVPILAKFSFKKVPPEEKEGVLQRVYGQIIAWSLNRKAMILALSVVLLGGSFALV 537 Query: 556 SQLPFSLLPSTASGQVAVQLELPKGTALSEVDKAVQNVETVLKQDSQVAXXXXXXXXXXX 615 L F+ LP+ + +ELP T+L + + +E + + ++ Sbjct: 538 PALGFTFLPNEEQKTLVASIELPSSTSLEKTNDVSLKIENMFDEQKEIKDVTAAIGSRD- 596 Query: 616 PQADDVFDQGGGYIQQPNIANLSVALKDQKQVNSYINSLQERLGNQQGVAA----VTITN 671 F G +++ N AN + LKD V S++ L++ + A + + Sbjct: 597 ------FRTG---LKRQNQANYFINLKDNVPVASFMKKLEKNMKEIVETEAPGTKLDVRE 647 Query: 672 QNIAG--DDSTINIMLSGSDAGTLDKAASTVRSGLAGIEGLSVVGKTDLTNGIPKFSIAL 729 ++ G ++ I+I L ++ +L KAA V + L + L V + + + I + Sbjct: 648 MDVGGPPSNNNIDIDLYSTNLTSLQKAAKQVETYLNQRKDLKYV-TNNFSEKQKQIIIDI 706 Query: 730 DRGKVLKAGVSRNDINKVLSRYMTKGKDFDISVSSGTGIIPVDVYLDPVKMGQAQAGGPL 789 D K GVS + G D + S G + +D V++ Q Sbjct: 707 DPEKAAAYGVSG---------FQIMGTIADATKSVEVGELKLDGTERTVQLSYNQ----- 752 Query: 790 PVYTPDQVLASLAAETVKGKDGTVYRLDQLGTLQRSDAGSSIQERDGQPYTVVQARIVSS 849 D V L + K G V + +L +++ D +SIQ+ DG+ + V A+IV Sbjct: 753 ---NLDSV-DELKNTVIFTKRGFV-PVSELASVKEVDTYTSIQKLDGKVFARVSAQIVGD 807 Query: 850 DTSGVSKAVNKVLRTT----NLPEGVTYSLGGITQQVTQMIFEMIIAVVLSIFLVLLITS 905 + + K N V+R +LP V+ GG + + Q E+ +A++++I LV + Sbjct: 808 N---IQKVTNDVIRHVKNDLDLPNDVSLEGGGGSDETVQTFQELGMAMLIAIGLVYITML 864 Query: 906 FVFRSWRAPIAVLISIPLALSGVVLALYTVHGQWNLAALIGVLMLTGIVVTNGIVLIDKI 965 F R P +L S+ G +L LY +++ +IG+LML GIV TN IVL+D+I Sbjct: 865 VTFGKARIPFIILSSLIFVPIGSLLGLYIAKEPLSISVMIGLLMLIGIVTTNAIVLVDRI 924 Query: 966 ERNRRE-GLGLRDAVMQGSLSRVRPIFMTAATTILTLVPLTLSGDDGTVISKVLGVVVIG 1024 +NR + G+ +R+A+++ +R+RPI MTA T+ L+PL L+ + GT+ISK L + VIG Sbjct: 925 GQNREQKGMTVREAIIEAGKTRLRPILMTAFATVAALIPLALTKESGTLISKGLAITVIG 984 Query: 1025 GMITSTLNSFVVIPILYE 1042 G+ +STL + ++IP++YE Sbjct: 985 GLTSSTLLTLILIPVMYE 1002 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.134 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 5,649,145,587 Number of extensions: 230969198 Number of successful extensions: 979836 Number of sequences better than 1.0e-05: 7162 Number of HSP's gapped: 942449 Number of HSP's successfully gapped: 14378 Length of query: 1061 Length of database: 3,060,696,203 Length adjustment: 146 Effective length of query: 915 Effective length of database: 1,685,228,013 Effective search space: 1541983631895 Effective search space used: 1541983631895 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 137 (57.4 bits)