BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0514.0001.p
         (79 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KBL6.1 B3KBL6_9BACI Manganese containing catalase                   145   1e-33
C0ZBU3.1 C0ZBU3_BREBN CotJC protein                                   138   2e-31
B1DKF5.1 B1DKF5_9BACL Catalase EC=1.11.1.6                            137   3e-31
Q2B3I3.1 Q2B3I3_9BACI Polypeptide composition of the spore coat       137   4e-31
B1HTK6.1 B1HTK6_LYSSC Protein cotJC                                   134   4e-30

>B3KBL6.1 B3KBL6_9BACI Manganese containing catalase
          Length = 189

 Score =  145 bits (366), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 67/79 (84%), Positives = 77/79 (97%)

Query: 1   VPWTATYIQAKGDPLADLYEDIAAEEKARATYQWLIDMTDDVDLQDSLKFLREREIVHAL 60
           VPWTATYIQAKGDP+ADLYEDIAAEEKARATYQWLIDMTDDVDLQDSLKFLREREI+H+L
Sbjct: 111 VPWTATYIQAKGDPIADLYEDIAAEEKARATYQWLIDMTDDVDLQDSLKFLREREIIHSL 170

Query: 61  RFKESVQIIIDEREQKRVF 79
           RF+E+V+II ++RE K++F
Sbjct: 171 RFREAVEIIKEDRETKKIF 189


>C0ZBU3.1 C0ZBU3_BREBN CotJC protein
          Length = 189

 Score =  138 bits (347), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 62/79 (78%), Positives = 74/79 (93%)

Query: 1   VPWTATYIQAKGDPLADLYEDIAAEEKARATYQWLIDMTDDVDLQDSLKFLREREIVHAL 60
           VPWTA YI AKGDP+ADLYEDIAAEEKARATYQWLIDMTDDVDLQDSLKFLRERE+VH++
Sbjct: 111 VPWTAAYIAAKGDPIADLYEDIAAEEKARATYQWLIDMTDDVDLQDSLKFLREREVVHSM 170

Query: 61  RFKESVQIIIDEREQKRVF 79
           RF+E+V+I+ +E+  K++F
Sbjct: 171 RFREAVEILKEEQNAKKIF 189


>B1DKF5.1 B1DKF5_9BACL Catalase EC=1.11.1.6
          Length = 191

 Score =  137 bits (345), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 65/79 (82%), Positives = 73/79 (92%)

Query: 1   VPWTATYIQAKGDPLADLYEDIAAEEKARATYQWLIDMTDDVDLQDSLKFLREREIVHAL 60
           VPWTA YIQAKGDP+ADLYEDIAAEEKARATYQWLIDMTDDVDLQDSLKFLREREIVH+L
Sbjct: 111 VPWTAAYIQAKGDPIADLYEDIAAEEKARATYQWLIDMTDDVDLQDSLKFLREREIVHSL 170

Query: 61  RFKESVQIIIDEREQKRVF 79
           RF+E+V++I  +   K+VF
Sbjct: 171 RFREAVEMIKSDWGTKKVF 189


>Q2B3I3.1 Q2B3I3_9BACI Polypeptide composition of the spore coat
          Length = 189

 Score =  137 bits (344), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 61/79 (77%), Positives = 76/79 (96%)

Query: 1   VPWTATYIQAKGDPLADLYEDIAAEEKARATYQWLIDMTDDVDLQDSLKFLREREIVHAL 60
           VPWTA+YIQAKGDP+ADLYEDIAAEEKARATYQWLID++DD DL DSL+FLREREIVH++
Sbjct: 111 VPWTASYIQAKGDPIADLYEDIAAEEKARATYQWLIDISDDPDLNDSLRFLREREIVHSM 170

Query: 61  RFKESVQIIIDEREQKRVF 79
           RF+E+V+I+ DER++K++F
Sbjct: 171 RFREAVEILKDERDKKKIF 189


>B1HTK6.1 B1HTK6_LYSSC Protein cotJC
          Length = 170

 Score =  134 bits (336), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 60/79 (75%), Positives = 75/79 (94%)

Query: 1   VPWTATYIQAKGDPLADLYEDIAAEEKARATYQWLIDMTDDVDLQDSLKFLREREIVHAL 60
           VP+TATYIQAKGDP+ADLYEDIAAEEKARATYQW+ID++DD DL DSLKFLREREIVH+ 
Sbjct: 92  VPFTATYIQAKGDPIADLYEDIAAEEKARATYQWIIDLSDDTDLNDSLKFLREREIVHSQ 151

Query: 61  RFKESVQIIIDEREQKRVF 79
           RF+E+V+I+ D+R+Q+++F
Sbjct: 152 RFREAVEILKDDRDQQKIF 170


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.321    0.136    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 432,716,488
Number of extensions: 14268252
Number of successful extensions: 40354
Number of sequences better than 1.0e-05: 318
Number of HSP's gapped: 40349
Number of HSP's successfully gapped: 318
Length of query: 79
Length of database: 3,060,696,203
Length adjustment: 50
Effective length of query: 29
Effective length of database: 2,589,645,453
Effective search space: 75099718137
Effective search space used: 75099718137
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 125 (52.8 bits)