BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0512.0013.p
         (255 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q97TH2.1 Q97TH2_CLOAB Glycogen-binding regulatory subunit of S/T...    98   7e-19
Q6DHT6.1 Q6DHT6_DANRE Zgc:92069                                        61   8e-08
A8WGM3.1 A8WGM3_DANRE Zgc:92069 protein                                61   9e-08
Q6DDQ5.1 PPR3C_XENLA Protein phosphatase 1 regulatory subunit 3C       56   3e-06

>Q97TH2.1 Q97TH2_CLOAB Glycogen-binding regulatory subunit of S/T protein
           phosphatase I
          Length = 247

 Score = 97.8 bits (242), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 90/264 (34%), Positives = 128/264 (48%), Gaps = 45/264 (17%)

Query: 7   LFAGLMMFTLIFGVSFVGSAFASGDEVKL------IDSDVSVIYKPGYVGFSGNVDVANL 60
           L A +  F  I  +  V +A A  + ++L       D + S+ +  GY+       V NL
Sbjct: 13  LIAFVAAF-FIINIGVVPNAKADTNPIQLYYSQRITDDEYSIGHVEGYLA------VRNL 65

Query: 61  GPVKNVTVHYTTDN-TTWYNTSANYV--GPTDGTREKWHFGISRTDASTDHNELKNLSF- 116
              KNV VHY+ D    W ++ A YV   P+D   E W F   +T +S++       SF 
Sbjct: 66  AFEKNVYVHYSLDGGKNWSDSPAAYVKTNPSDN-YEVWKF---KTPSSSE-------SFG 114

Query: 117 --IKFAIEYEVNGQVYWDNNGGANYYNEVNHTVPLSSVILGAPNVVNGSSTLSNGEFNGT 174
             I +  +YEVNGQ YWDNN G NY   V+    LSSV +         ++ SN  F   
Sbjct: 115 PPITYCFKYEVNGQTYWDNNNGKNY---VDGAYGLSSVYVHDVKTYRNINS-SNNYFATN 170

Query: 175 IYVKNLNPTKTVKVTYSTDNWATTQEAFATYNGSLNNLNSVERWSYSINVP---GATDVK 231
           + VKN++  + VKV Y+TDNW T  +  A +N         E+  + I+ P   G   V+
Sbjct: 171 VDVKNIDGDRVVKVRYTTDNWKTYTDVVANHNN--------EKTEFGISQPVPQGTKQVQ 222

Query: 232 YSVSYTTGGQTYWDNNYGHNYEVN 255
           ++V Y   G  YWDNN+G NY VN
Sbjct: 223 FAVVYEVNGVQYWDNNFGSNYTVN 246


>Q6DHT6.1 Q6DHT6_DANRE Zgc:92069
          Length = 311

 Score = 61.2 bits (147), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 159 VVNGSSTLSNGEFNGTIYVKNLNPTKTVKVTYSTDNWATTQEAFATYNGSLNNLNSVERW 218
           V   + TL      GTI V+NL   K+V V  + D+W + ++   T+  ++      + +
Sbjct: 147 VCLENCTLQERALTGTIKVRNLAYEKSVHVRITFDSWKSFEDIECTFMNNVYGCQDTDTF 206

Query: 219 SYSINVPG----ATDVKYSVSYTTGGQTYWDNNYGHNY 252
           S++I +PG       V++ +S+ TG Q YWDNN G NY
Sbjct: 207 SFAIELPGYVPPQNKVEFCISFRTGEQIYWDNNDGRNY 244


>A8WGM3.1 A8WGM3_DANRE Zgc:92069 protein
          Length = 323

 Score = 61.2 bits (147), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 159 VVNGSSTLSNGEFNGTIYVKNLNPTKTVKVTYSTDNWATTQEAFATYNGSLNNLNSVERW 218
           V   + TL      GTI V+NL   K+V V  + D+W + ++   T+  ++      + +
Sbjct: 160 VCLENCTLQERALTGTIKVRNLAYEKSVHVRITFDSWKSFEDIECTFMNNVYGCQDTDTF 219

Query: 219 SYSINVPG----ATDVKYSVSYTTGGQTYWDNNYGHNY 252
           S++I +PG       V++ +S+ TG Q YWDNN G NY
Sbjct: 220 SFAIELPGYVPPQNKVEFCISFRTGEQIYWDNNDGRNY 257


>Q6DDQ5.1 PPR3C_XENLA Protein phosphatase 1 regulatory subunit 3C
          Length = 299

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 4/100 (4%)

Query: 159 VVNGSSTLSNGEFNGTIYVKNLNPTKTVKVTYSTDNWATTQEAFATYNGSLNNLNSVERW 218
           V   + +L      GTI VKN+N TK+VK+  + + W +  +    Y  ++      + +
Sbjct: 138 VCLENCSLQERSVAGTIKVKNVNYTKSVKIRITFNTWKSFVDVDCVYMNNVYGSTDSDTF 197

Query: 219 SYSI----NVPGATDVKYSVSYTTGGQTYWDNNYGHNYEV 254
           S+ I    N+P    +++ +SY + GQ +WDNN G NY V
Sbjct: 198 SFVIDIPPNIPSHEKIEFCISYESEGQVFWDNNDGQNYSV 237


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.313    0.130    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,690,304,036
Number of extensions: 74007369
Number of successful extensions: 147018
Number of sequences better than 1.0e-05: 37
Number of HSP's gapped: 147135
Number of HSP's successfully gapped: 43
Length of query: 255
Length of database: 3,060,696,203
Length adjustment: 133
Effective length of query: 122
Effective length of database: 1,807,701,208
Effective search space: 220539547376
Effective search space used: 220539547376
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 129 (54.3 bits)