BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0512.0009.p (373 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0Z5K2.1 C0Z5K2_BREBN Putative uncharacterized protein 583 e-165 B3K757.1 B3K757_9BACI Putative uncharacterized protein 508 e-142 A8MG93.1 A8MG93_ALKOO Putative uncharacterized protein 504 e-141 Q24RG0.1 Q24RG0_DESHY Putative uncharacterized protein 419 e-115 B8FQE6.1 B8FQE6_DESHD ATPase associated with various cellular ac... 419 e-115 >C0Z5K2.1 C0Z5K2_BREBN Putative uncharacterized protein Length = 373 Score = 583 bits (1504), Expect = e-165, Method: Compositional matrix adjust. Identities = 281/370 (75%), Positives = 319/370 (86%), Gaps = 1/370 (0%) Query: 1 MSKQETTMLSPARQLTRAEQELVWNKPLSHKVSEEEKRICSEIRRNWNRGELKIANILLE 60 M++ E LSP RQLT AE++LVW KP +HKVSEEE+RI E++RNW+RGE+KIAN+LLE Sbjct: 1 MTENENYHLSPERQLTDAEKKLVWKKPTTHKVSEEEQRISKEVKRNWHRGEMKIANLLLE 60 Query: 61 GDAGSGKTQLAKALSAELGLPYTKVTCFADMDKSDIIGAILPVIPEEDLQKLEPAEQAVW 120 GDAGSGKTQLAKALSA GLPYTKVTCFADMDKSDIIGAILPVI E L+K+EPAEQ +W Sbjct: 61 GDAGSGKTQLAKALSANFGLPYTKVTCFADMDKSDIIGAILPVISSERLEKMEPAEQTLW 120 Query: 121 NALYENDGFQSTAEILMSVLGISREQXXXX-XXXXXXXXXQNSGDEAVEYRFYPSEIVRA 179 +LYE++G QS +EILM LGI++EQ +N+ EA+EYRFYPSEIVRA Sbjct: 121 KSLYESNGLQSISEILMEALGITQEQAALKIKQLLERAAAENNDGEAIEYRFYPSEIVRA 180 Query: 180 YQQGYLLEIQEPTVIRDAAVLMALNSALELDGSINLPTGIIRRHPDFIAVITTNRSYAGT 239 YQ GYLLEIQEP VIRDAAVLMALNSALELDGSINLPT IIRRHPDFIAVITTNRSYAGT Sbjct: 181 YQNGYLLEIQEPNVIRDAAVLMALNSALELDGSINLPTEIIRRHPDFIAVITTNRSYAGT 240 Query: 240 RPLNEALRDRVQHTEKMDLPAKEIMIERAISKTGYTDERVLGVLAEIIMVLDSTARANAI 299 RPLNEALRDRVQHTEKMDLP KEIMIER ++KTG+ D ++LG+LA++I+VLD TARANAI Sbjct: 241 RPLNEALRDRVQHTEKMDLPTKEIMIERVMAKTGFQDGKMLGILADMIVVLDKTARANAI 300 Query: 300 KGVAGMRSFFYWADAVAGGASARESLYHKVIYKITTDSEEIKLLEEALRSHGLFSGLDEI 359 KGVAGMRSFFYWADA+AGGASA+ESLYHKVIYKITTDSEEIKLLEEAL++HGL + LDE Sbjct: 301 KGVAGMRSFFYWADAIAGGASAKESLYHKVIYKITTDSEEIKLLEEALKNHGLLASLDEA 360 Query: 360 EREGKKKESL 369 E E KK E+L Sbjct: 361 EIEQKKNENL 370 >B3K757.1 B3K757_9BACI Putative uncharacterized protein Length = 739 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 251/363 (69%), Positives = 292/363 (80%) Query: 4 QETTMLSPARQLTRAEQELVWNKPLSHKVSEEEKRICSEIRRNWNRGELKIANILLEGDA 63 E +LSP R LT E+ LVW KPL+HKVSEEE+RI ++I+RNW+RGE+KIAN+LLEGDA Sbjct: 7 NEYYVLSPGRALTEEEKSLVWTKPLTHKVSEEERRISNDIKRNWDRGEMKIANVLLEGDA 66 Query: 64 GSGKTQLAKALSAELGLPYTKVTCFADMDKSDIIGAILPVIPEEDLQKLEPAEQAVWNAL 123 GSGKTQLAKALSA LPYTKVTCFADMDKSDIIGAILPVI + ++ LEP ++A AL Sbjct: 67 GSGKTQLAKALSANFRLPYTKVTCFADMDKSDIIGAILPVITSDQIEHLEPDDRAALKAL 126 Query: 124 YENDGFQSTAEILMSVLGISREQXXXXXXXXXXXXXQNSGDEAVEYRFYPSEIVRAYQQG 183 Y++DGF+S+ EILM LGISRE + ++AVEYRFY SEIVRA+Q G Sbjct: 127 YDSDGFRSSTEILMEALGISREHASAKMKHVLKLAANAAENKAVEYRFYASEIVRAFQNG 186 Query: 184 YLLEIQEPTVIRDAAVLMALNSALELDGSINLPTGIIRRHPDFIAVITTNRSYAGTRPLN 243 YLLEIQEP VIRDAAVLMALNSALE G++NLP GI+ RHPDFIAVIT NRSYAG+RPLN Sbjct: 187 YLLEIQEPNVIRDAAVLMALNSALEPGGTLNLPMGIVHRHPDFIAVITANRSYAGSRPLN 246 Query: 244 EALRDRVQHTEKMDLPAKEIMIERAISKTGYTDERVLGVLAEIIMVLDSTARANAIKGVA 303 EALRDR+QH+EKMDLPAK++M+ERA +K G D+ +L +LA +I++LD TARANAIKGVA Sbjct: 247 EALRDRIQHSEKMDLPAKDMMMERAKAKIGCEDDEMLDILARVIILLDKTARANAIKGVA 306 Query: 304 GMRSFFYWADAVAGGASARESLYHKVIYKITTDSEEIKLLEEALRSHGLFSGLDEIEREG 363 GMRS+FYWADAVA G SARESLYHKVIYKITTD EEIKLLE+AL GL LDEI E Sbjct: 307 GMRSYFYWADAVAQGTSARESLYHKVIYKITTDPEEIKLLEDALEGQGLLGLLDEIPVEP 366 Query: 364 KKK 366 K Sbjct: 367 PSK 369 >A8MG93.1 A8MG93_ALKOO Putative uncharacterized protein Length = 734 Score = 504 bits (1299), Expect = e-141, Method: Compositional matrix adjust. Identities = 244/373 (65%), Positives = 291/373 (78%), Gaps = 4/373 (1%) Query: 4 QETTMLSPARQLTRAEQELVWNKPLSHKVSEEEKRICSEIRRNWNRGELKIANILLEGDA 63 ++ LS R+ T EQ L+W KP+SHK SEEE RIC E++RNW+RGE+KIANILLEGDA Sbjct: 2 EQEYFLSSNRKFTEEEQRLIWEKPMSHKTSEEEIRICKEVKRNWHRGEMKIANILLEGDA 61 Query: 64 GSGKTQLAKALSAELGLPYTKVTCFADMDKSDIIGAILPVIPEEDLQKLEPAEQAVWNAL 123 GSGKTQLAKALSA+ G+PYTKVTCFADMDKSDIIGAILPVI EE L K+ ++A AL Sbjct: 62 GSGKTQLAKALSADFGIPYTKVTCFADMDKSDIIGAILPVISEEKLDKMGREDKAALEAL 121 Query: 124 YENDGFQSTAEILMSVLGISREQXXXXXXXXXXXXXQNSGDEAVEYRFYPSEIVRAYQQG 183 YE+DG S E+L+ L I E+ S + VEYRFYPSEIVRAY+ G Sbjct: 122 YESDGLHSATEVLVHALRIPHEEAAGKIKYLMELAGGYSKHDIVEYRFYPSEIVRAYRNG 181 Query: 184 YLLEIQEPTVIRDAAVLMALNSALELDGSINLPTGIIRRHPDFIAVITTNRSYAGTRPLN 243 YLLEIQEPTVIRDAAVLMALNSALELDGSINLPT I+ RHPD I +ITTNR+Y G RPLN Sbjct: 182 YLLEIQEPTVIRDAAVLMALNSALELDGSINLPTEIVHRHPDCIVIITTNRNYLGCRPLN 241 Query: 244 EALRDRVQHTEKMDLPAKEIMIERAISKTGYTDERVLGVLAEIIMVLDSTARANAIKGVA 303 E+LRDR+QHTEKMDLP+K+IMIERAI+KTGY + +L +LA+ I++LD TA+AN+IKGVA Sbjct: 242 ESLRDRIQHTEKMDLPSKDIMIERAIAKTGYENLPLLEILADTIIILDQTAKANSIKGVA 301 Query: 304 GMRSFFYWADAVAGGASARESLYHKVIYKITTDSEEIKLLEEALRSHGLFSGLDEIEREG 363 GMRSFFYW DA+A GA+ ESLYHKV+YKITTDS+EIK+LEEAL++ + L +IE Sbjct: 302 GMRSFFYWVDAIASGAAVEESLYHKVLYKITTDSDEIKILEEALKAQNVLEKLWDIENNV 361 Query: 364 KKKES----LRNW 372 KKK S ++ W Sbjct: 362 KKKTSEVAEIKTW 374 >Q24RG0.1 Q24RG0_DESHY Putative uncharacterized protein Length = 678 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 210/360 (58%), Positives = 254/360 (70%), Gaps = 53/360 (14%) Query: 8 MLSPARQLTRAEQELVWNKPLSHKVSEEEKRICSEIRRNWNRGELKIANILLEGDAGSGK 67 +LSPARQLT E LVW KP +H SE E+RI +E+ RNW RGE+K+ ILLEGDAGSGK Sbjct: 6 ILSPARQLTEEETSLVWQKPATHIESEAERRISAEVYRNWTRGEMKLTTILLEGDAGSGK 65 Query: 68 TQLAKALSAELGLPYTKVTCFADMDKSDIIGAILPVIPEEDLQKLEPAEQAVWNALYEND 127 TQLAKALSA GLPYTKVTCFADMDKSDI+G+ILPV+PE D Sbjct: 66 TQLAKALSANFGLPYTKVTCFADMDKSDILGSILPVLPE--------------------D 105 Query: 128 GFQSTAEILMSVLGISREQXXXXXXXXXXXXXQNSGDEAVEYRFYPSEIVRAYQQGYLLE 187 G ++ EAV Y +YPSEIV+AY++G+LLE Sbjct: 106 GNKA---------------------------------EAVTYNYYPSEIVQAYEKGWLLE 132 Query: 188 IQEPTVIRDAAVLMALNSALELDGSINLPTGIIRRHPDFIAVITTNRSYAGTRPLNEALR 247 IQEPTVIRDAAVLMALNSALE +GSINLPT I RHPDFIAVITTNR Y G RPLNEALR Sbjct: 133 IQEPTVIRDAAVLMALNSALEPEGSINLPTRIAHRHPDFIAVITTNRGYNGCRPLNEALR 192 Query: 248 DRVQHTEKMDLPAKEIMIERAISKTGYTDERVLGVLAEIIMVLDSTARANAIKGVAGMRS 307 DRVQH+EKMDLPA E+M+ER ++KTG TD+ +L A I++LD TA+ANAIKGVAGMRS Sbjct: 193 DRVQHSEKMDLPAVEVMMERGLAKTGCTDQELLLTFARAIVLLDQTAKANAIKGVAGMRS 252 Query: 308 FFYWADAVAGGASARESLYHKVIYKITTDSEEIKLLEEALRSHGLFSGLDEIEREGKKKE 367 +F+W DAV G+ E+LYHKVIYKITTD +EI +LE+AL G+ + L+++ ++ + + Sbjct: 253 YFFWVDAVLQGSKTVEALYHKVIYKITTDPDEILILEQALAKQGMLAALEKVSQQSGRAQ 312 >B8FQE6.1 B8FQE6_DESHD ATPase associated with various cellular activities AAA_5 Length = 678 Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust. Identities = 210/360 (58%), Positives = 254/360 (70%), Gaps = 53/360 (14%) Query: 8 MLSPARQLTRAEQELVWNKPLSHKVSEEEKRICSEIRRNWNRGELKIANILLEGDAGSGK 67 +LSPARQLT E LVW KP +H SE E+RI +E+ RNW RGE+K+ ILLEGDAGSGK Sbjct: 6 ILSPARQLTEEETSLVWQKPATHIESEAERRISAEVYRNWTRGEMKLTTILLEGDAGSGK 65 Query: 68 TQLAKALSAELGLPYTKVTCFADMDKSDIIGAILPVIPEEDLQKLEPAEQAVWNALYEND 127 TQLAKALSA GLPYTKVTCFADMDKSDI+G+ILPV+PE D Sbjct: 66 TQLAKALSANFGLPYTKVTCFADMDKSDILGSILPVLPE--------------------D 105 Query: 128 GFQSTAEILMSVLGISREQXXXXXXXXXXXXXQNSGDEAVEYRFYPSEIVRAYQQGYLLE 187 G ++ EAV Y +YPSEIV+AY++G+LLE Sbjct: 106 GNKA---------------------------------EAVTYNYYPSEIVQAYEKGWLLE 132 Query: 188 IQEPTVIRDAAVLMALNSALELDGSINLPTGIIRRHPDFIAVITTNRSYAGTRPLNEALR 247 IQEPTVIRDAAVLMALNSALE +GSINLPT I RHPDFIAVITTNR Y G RPLNEALR Sbjct: 133 IQEPTVIRDAAVLMALNSALEPEGSINLPTRIAHRHPDFIAVITTNRGYNGCRPLNEALR 192 Query: 248 DRVQHTEKMDLPAKEIMIERAISKTGYTDERVLGVLAEIIMVLDSTARANAIKGVAGMRS 307 DRVQH+EKMDLPA E+M+ER ++KTG TD+ +L A I++LD TA+ANAIKGVAGMRS Sbjct: 193 DRVQHSEKMDLPAVEVMMERGLAKTGCTDQELLLTFARAIVLLDQTAKANAIKGVAGMRS 252 Query: 308 FFYWADAVAGGASARESLYHKVIYKITTDSEEIKLLEEALRSHGLFSGLDEIEREGKKKE 367 +F+W DAV G+ E+LYHKVIYKITTD +EI +LE+AL G+ + L+++ ++ + + Sbjct: 253 YFFWVDAVLQGSKTVEALYHKVIYKITTDPDEILILEQALAKQGMLAALEKVSQQSGRAQ 312 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.131 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,036,818,012 Number of extensions: 79705525 Number of successful extensions: 275231 Number of sequences better than 1.0e-05: 15 Number of HSP's gapped: 275293 Number of HSP's successfully gapped: 21 Length of query: 373 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 236 Effective length of database: 1,770,017,148 Effective search space: 417724046928 Effective search space used: 417724046928 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)