BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0512.0008.p (319 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K757.1 B3K757_9BACI Putative uncharacterized protein 505 e-141 C0Z5K1.1 C0Z5K1_BREBN Putative uncharacterized protein 497 e-139 A8MG93.1 A8MG93_ALKOO Putative uncharacterized protein 444 e-123 Q24RG0.1 Q24RG0_DESHY Putative uncharacterized protein 387 e-106 B8FQE6.1 B8FQE6_DESHD ATPase associated with various cellular ac... 387 e-106 >B3K757.1 B3K757_9BACI Putative uncharacterized protein Length = 739 Score = 505 bits (1300), Expect = e-141, Method: Compositional matrix adjust. Identities = 237/319 (74%), Positives = 282/319 (88%) Query: 1 MERSDTEEDGAPRVHQANPELKSEEARQQERDFRKKLNREARETVSGSIHSKIKLIVHRP 60 ME +D+ E+G P HQANPE SEE +Q+ERDFRKKLNR +RE VS S+H +KLIVHRP Sbjct: 421 MESTDSGEEGTPNYHQANPEPMSEEEKQKERDFRKKLNRVSREIVSDSLHRSVKLIVHRP 480 Query: 61 DFDLDSKREYQSLSRELLPVVREIARKTMPLLAHDDSFDFAKHQYYGSKFQADSIAYRDF 120 D+D + + EY LS+ L+PVVREIARKT+PLL H+ + ++AK+QYYGSKFQADS+AYRDF Sbjct: 481 DYDPNLQEEYGRLSQGLMPVVREIARKTLPLLEHEITAEYAKNQYYGSKFQADSVAYRDF 540 Query: 121 RYFAKKRPPTDSPSLAVGVRVDESASMSAFGRLAAAKQAVIAVYEFCQLCRIPVLIYGDT 180 R F+KKRPPT+SP L VG+RVDESASM+AFGRL AAK+AVIAVYEFCQ+C IPVLIYGDT Sbjct: 541 RLFSKKRPPTESPGLVVGLRVDESASMAAFGRLEAAKRAVIAVYEFCQICHIPVLIYGDT 600 Query: 181 ADVSRLEQMSMYAYADFEHPDANDRFRLMGIRARSNNRDGMALRVMADRLAGSAAQTRLL 240 ADVSRLEQMS++AYAD++HPD DRFRLMGIRARSNNRDGMALR+MA+RLA S QT+LL Sbjct: 601 ADVSRLEQMSIFAYADYDHPDVRDRFRLMGIRARSNNRDGMALRIMAERLAASPKQTKLL 660 Query: 241 ISISDGQPKALEDYTGSLAVQDMQQTLAYYERKGVTFLAAAIGQDKDVIHDIYGSDRFLD 300 ISISDGQPKA+EDYTGSLA+QDM+QTL+ Y+RKGV FLAAAIGQDKDVI IYG++RFLD Sbjct: 661 ISISDGQPKAMEDYTGSLAIQDMKQTLSEYDRKGVKFLAAAIGQDKDVISRIYGAERFLD 720 Query: 301 ISHLPELPAQLVRMIARYL 319 I++L ELPA+LVR+I+RYL Sbjct: 721 ITNLNELPAKLVRIISRYL 739 >C0Z5K1.1 C0Z5K1_BREBN Putative uncharacterized protein Length = 340 Score = 497 bits (1279), Expect = e-139, Method: Compositional matrix adjust. Identities = 235/319 (73%), Positives = 283/319 (88%) Query: 1 MERSDTEEDGAPRVHQANPELKSEEARQQERDFRKKLNREARETVSGSIHSKIKLIVHRP 60 MERS EDG+P HQANPE SEEA+Q+ERDFRKKLNREARE +S SIH K+KLIVHRP Sbjct: 22 MERSGLGEDGSPNYHQANPESMSEEAKQKERDFRKKLNREARELISDSIHQKVKLIVHRP 81 Query: 61 DFDLDSKREYQSLSRELLPVVREIARKTMPLLAHDDSFDFAKHQYYGSKFQADSIAYRDF 120 D+D ++++EY L + L+ +V+EIARKT+P L H+ S DF++++YYGSKFQADS+AY+D+ Sbjct: 82 DYDEENQQEYVRLYQGLMSIVQEIARKTLPYLEHELSSDFSRNRYYGSKFQADSVAYKDY 141 Query: 121 RYFAKKRPPTDSPSLAVGVRVDESASMSAFGRLAAAKQAVIAVYEFCQLCRIPVLIYGDT 180 +YFAKKRPPT+SPSL VG+RVDESASMSA+GRL AAK+AVIAVYE+CQLC+IP+LIYGDT Sbjct: 142 KYFAKKRPPTESPSLVVGLRVDESASMSAYGRLEAAKRAVIAVYEYCQLCQIPILIYGDT 201 Query: 181 ADVSRLEQMSMYAYADFEHPDANDRFRLMGIRARSNNRDGMALRVMADRLAGSAAQTRLL 240 ADVSRLEQMS++AYADF+ DANDRFRLM I ARSNNRDGMALR+MA+RLA S +T+LL Sbjct: 202 ADVSRLEQMSIFAYADFDKADANDRFRLMRIHARSNNRDGMALRIMAERLAASPQKTKLL 261 Query: 241 ISISDGQPKALEDYTGSLAVQDMQQTLAYYERKGVTFLAAAIGQDKDVIHDIYGSDRFLD 300 ISISDGQPKA++DYTGS AV DM+QT+ YERKGVTFLAAAIGQDKDVI +IYG++RFLD Sbjct: 262 ISISDGQPKAMDDYTGSYAVTDMKQTIQEYERKGVTFLAAAIGQDKDVISEIYGNERFLD 321 Query: 301 ISHLPELPAQLVRMIARYL 319 I++L E PA+LVRMIARYL Sbjct: 322 ITNLHEFPAKLVRMIARYL 340 >A8MG93.1 A8MG93_ALKOO Putative uncharacterized protein Length = 734 Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust. Identities = 206/311 (66%), Positives = 262/311 (84%), Gaps = 1/311 (0%) Query: 9 DGAPRVHQANPELKSEEARQQERDFRKKLNREARETVSGSIHSKIKLIVHRPDFDLDSKR 68 DG P+ HQ N E + E +++E +FRKKLN+EAR+ VS SIH +K IVHRP++DL++K Sbjct: 425 DGTPKYHQLNTE-ELSEEQKEESEFRKKLNKEARKAVSNSIHRSVKTIVHRPEWDLENKE 483 Query: 69 EYQSLSRELLPVVREIARKTMPLLAHDDSFDFAKHQYYGSKFQADSIAYRDFRYFAKKRP 128 EY S++LLP++ +IA+KT PLL H+ S +FAK YYG++FQAD IAY+DFRYF+KK P Sbjct: 484 EYLRFSKDLLPIIMQIAKKTTPLLEHEISTEFAKTHYYGNQFQADHIAYKDFRYFSKKLP 543 Query: 129 PTDSPSLAVGVRVDESASMSAFGRLAAAKQAVIAVYEFCQLCRIPVLIYGDTADVSRLEQ 188 P +SPSLAVG+RVDESASMS+FGRL AAK AVIAVYEFC LC IP+L+YGDTAD S++EQ Sbjct: 544 PNESPSLAVGLRVDESASMSSFGRLEAAKSAVIAVYEFCHLCNIPILVYGDTADTSKIEQ 603 Query: 189 MSMYAYADFEHPDANDRFRLMGIRARSNNRDGMALRVMADRLAGSAAQTRLLISISDGQP 248 MS++AY+DFE D N+R+RLMGIR RSNNRDGMALR++A++L S QT+LLISISDGQP Sbjct: 604 MSIFAYSDFEKDDYNNRYRLMGIRGRSNNRDGMALRILAEKLMSSPQQTKLLISISDGQP 663 Query: 249 KALEDYTGSLAVQDMQQTLAYYERKGVTFLAAAIGQDKDVIHDIYGSDRFLDISHLPELP 308 KA+EDYTG +A++DM++T+A YERKG+TFLAAAIGQDK+VI IY DRFLDI++L ELP Sbjct: 664 KAMEDYTGKIAMEDMKKTIAEYERKGITFLAAAIGQDKEVISQIYKEDRFLDITNLEELP 723 Query: 309 AQLVRMIARYL 319 +LV++IARYL Sbjct: 724 GKLVKIIARYL 734 >Q24RG0.1 Q24RG0_DESHY Putative uncharacterized protein Length = 678 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 181/318 (56%), Positives = 242/318 (76%), Gaps = 1/318 (0%) Query: 2 ERSDTEEDGAPRVHQANPELKSEEARQQERDFRKKLNREARETVSGSIHSKIKLIVHRPD 61 + SD E+G P H+ P EE +Q+RDFRK LN++ARE V GS H K+ LIVHRP+ Sbjct: 362 QSSDQGENGNPIYHELQPT-SPEELERQKRDFRKHLNQQAREMVKGSCHEKVNLIVHRPE 420 Query: 62 FDLDSKREYQSLSRELLPVVREIARKTMPLLAHDDSFDFAKHQYYGSKFQADSIAYRDFR 121 L +REY+ ++ LLPV+RE+ RKT PLL H+ + +F K + YG+KF A+ +A DFR Sbjct: 421 ATLAHRREYEQIASGLLPVIRELVRKTAPLLEHEVATEFGKSRLYGTKFHAEKLASPDFR 480 Query: 122 YFAKKRPPTDSPSLAVGVRVDESASMSAFGRLAAAKQAVIAVYEFCQLCRIPVLIYGDTA 181 F++K PP + PSLAV +R+DESASMSAFGRL AAKQA +AVYEFC C IP LIYGDTA Sbjct: 481 CFSQKCPPNEEPSLAVALRIDESASMSAFGRLTAAKQAAVAVYEFCTSCGIPTLIYGDTA 540 Query: 182 DVSRLEQMSMYAYADFEHPDANDRFRLMGIRARSNNRDGMALRVMADRLAGSAAQTRLLI 241 D S LE+MS+Y+Y D+E+P ND++ LM I+ SNNRDGMALR+++++L + +T+LLI Sbjct: 541 DRSPLERMSLYSYIDYENPSLNDKYSLMAIQGHSNNRDGMALRILSEKLLQAPQKTKLLI 600 Query: 242 SISDGQPKALEDYTGSLAVQDMQQTLAYYERKGVTFLAAAIGQDKDVIHDIYGSDRFLDI 301 SISDGQPKAL DYTG +A+ DM++ + Y R+G+ FLAAAIGQDK+ + DIYG +R+LDI Sbjct: 601 SISDGQPKALPDYTGEVALADMKEVIRDYSRQGIVFLAAAIGQDKETLCDIYGPERYLDI 660 Query: 302 SHLPELPAQLVRMIARYL 319 + L +LPA+LV++IA+YL Sbjct: 661 TDLRQLPARLVQVIAKYL 678 >B8FQE6.1 B8FQE6_DESHD ATPase associated with various cellular activities AAA_5 Length = 678 Score = 387 bits (995), Expect = e-106, Method: Compositional matrix adjust. Identities = 181/318 (56%), Positives = 242/318 (76%), Gaps = 1/318 (0%) Query: 2 ERSDTEEDGAPRVHQANPELKSEEARQQERDFRKKLNREARETVSGSIHSKIKLIVHRPD 61 + SD E+G P H+ P EE +Q+RDFRK LN++ARE V GS H K+ LIVHRP+ Sbjct: 362 QSSDQGENGNPIYHELQPT-SPEELERQKRDFRKHLNQQAREMVKGSCHEKVNLIVHRPE 420 Query: 62 FDLDSKREYQSLSRELLPVVREIARKTMPLLAHDDSFDFAKHQYYGSKFQADSIAYRDFR 121 L +REY+ ++ LLPV+RE+ RKT PLL H+ + +F K + YG+KF A+ +A DFR Sbjct: 421 ATLAHRREYEQIASGLLPVIRELVRKTAPLLEHEVATEFGKSRLYGTKFHAEKLASPDFR 480 Query: 122 YFAKKRPPTDSPSLAVGVRVDESASMSAFGRLAAAKQAVIAVYEFCQLCRIPVLIYGDTA 181 F++K PP + PSLAV +R+DESASMSAFGRL AAKQA +AVYEFC C IP LIYGDTA Sbjct: 481 CFSQKCPPNEEPSLAVALRIDESASMSAFGRLTAAKQAAVAVYEFCTSCGIPTLIYGDTA 540 Query: 182 DVSRLEQMSMYAYADFEHPDANDRFRLMGIRARSNNRDGMALRVMADRLAGSAAQTRLLI 241 D S LE+MS+Y+Y D+E+P ND++ LM I+ SNNRDGMALR+++++L + +T+LLI Sbjct: 541 DRSPLERMSLYSYIDYENPSLNDKYSLMAIQGHSNNRDGMALRILSEKLLQAPQKTKLLI 600 Query: 242 SISDGQPKALEDYTGSLAVQDMQQTLAYYERKGVTFLAAAIGQDKDVIHDIYGSDRFLDI 301 SISDGQPKAL DYTG +A+ DM++ + Y R+G+ FLAAAIGQDK+ + DIYG +R+LDI Sbjct: 601 SISDGQPKALPDYTGEVALADMKEVIRDYSRQGIVFLAAAIGQDKETLCDIYGPERYLDI 660 Query: 302 SHLPELPAQLVRMIARYL 319 + L +LPA+LV++IA+YL Sbjct: 661 TDLRQLPARLVQVIAKYL 678 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.134 0.378 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,811,633,569 Number of extensions: 71671544 Number of successful extensions: 192029 Number of sequences better than 1.0e-05: 143 Number of HSP's gapped: 192067 Number of HSP's successfully gapped: 143 Length of query: 319 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 184 Effective length of database: 1,788,859,178 Effective search space: 329150088752 Effective search space used: 329150088752 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)