BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0510.0007.p (673 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A0NHK2.1 A0NHK2_OENOE Multidrug-efflux transporter related protein 165 2e-38 Q04DJ9.1 Q04DJ9_OENOB 4-amino-4-deoxy-L-arabinose transferase or... 163 7e-38 Q1PZS2.1 Q1PZS2_9BACT Putative uncharacterized protein 135 1e-29 B7JYC3.1 B7JYC3_CYAP8 Glycosyl transferase family 39 132 2e-28 B4BWF5.1 B4BWF5_9CHRO Glycosyl transferase family 39 132 2e-28 >A0NHK2.1 A0NHK2_OENOE Multidrug-efflux transporter related protein Length = 539 Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 148/518 (28%), Positives = 246/518 (47%), Gaps = 70/518 (13%) Query: 12 SGLFKRVYRSCIDNPWPLALFVLGAIVRIIYLGSIPSGLNQDEASIGYDAYAILHYGIDR 71 S LFK RS +++ L A +RI SI GLN DEA GY+++++ HYG+D Sbjct: 21 SSLFKN--RSQYFRIAAMSIIFLAAFIRIFRYSSI-MGLNLDEAMGGYNSWSLAHYGVDS 77 Query: 72 NGVHLPIHLIAWGSGQNALYAYLSMPFIWLFGLTPLSVRALSLVMGL-------VGMIFF 124 P++L AWG+G N LY +S+PFI L GL+ ++ R +++ + VGM+ + Sbjct: 78 ALNRNPVYLYAWGTGMNLLYPLISVPFIKLIGLSLVAYRLPMVILSIGSIFSLVVGMLMY 137 Query: 125 YLSMRQLFPARAGGIFAMFFIAINPWHIMMSRWALESNLFPTLILIAVYCLL----KSFQ 180 L R + + A + ++PW IM +RW LESNLFP + A L K Sbjct: 138 KLPNRLILLSLAT-------VFLSPWSIMANRWGLESNLFPIIFTFAASAFLLFLSKQAN 190 Query: 181 TPK----WSYGFTVIMAISLYAYGTAYFFVPVFAICAAFLLLY-SRVLKFRTLVWNTVFF 235 PK + Y F ++A+S YAY +F +P F +C F LY + + ++L Sbjct: 191 HPKQAKMYLYIFVFLIALSAYAYSNNWFMLPFF-VCGIFGYLYLKKKVSLKSLSAPAFLI 249 Query: 236 VLLALPILLFIVINHYGFHEIATRLFTIPRLTMPRVEQISSVFGGELLHTASSNFSRFIE 295 +L+ P+LLF IN++ TIP+L+ R + G + ++ S+N +FI+ Sbjct: 250 LLIIWPLLLFAKINYFSGKTFKILSLTIPKLSSSRSNSELIIGHGNIFYSISNNIFKFIK 309 Query: 296 LLRSGSDGLPWNAISPYGYAYPIALPFALLGLIVMIYEVYQRRREGLGYITVLLWLGIAI 355 L+ +G+D L WN++ G YP F ++G+++ +++R + ++ + L + I Sbjct: 310 LMVTGNDHLIWNSLPQIGILYPFMFIFCIVGIVI----AFKKRNDWDNFMLISLLSCLPI 365 Query: 356 LMALITDVNINRINIIFYPLIMLVA----------------TAVFSLYQKXXXXXXXXXX 399 +M I +N N +N + P++ A T VFSLY Sbjct: 366 IM--IIKINANHLNALMLPILYFEALGLYYSLKGPILKMAFTIVFSLY-----------F 412 Query: 400 XXXXMFGFFTNAYFGKFPKEIGPAFYDSLGEAIQYASETASGDIYVTDKVNMPYIYVLFY 459 F F + + + P+ LG+AI++A+++ + IY+T Y+ FY Sbjct: 413 VTFSFFYFHADQTLLTQGRTLTPSI---LGKAIRFANKSKAKKIYITCLPKGGYVIPRFY 469 Query: 460 EKINPHDFLASVKYINPGDAFQMVS---SFGRYKFGAP 494 I+P F P F+ S S+G++ F P Sbjct: 470 CPISPVAFNKE----KPNVTFKTESNYKSYGKWYFKQP 503 >Q04DJ9.1 Q04DJ9_OENOB 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family Length = 539 Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 148/518 (28%), Positives = 244/518 (47%), Gaps = 70/518 (13%) Query: 12 SGLFKRVYRSCIDNPWPLALFVLGAIVRIIYLGSIPSGLNQDEASIGYDAYAILHYGIDR 71 S LFK RS +++ L A +RI SI GLN DEA GY+++++ HYG+D Sbjct: 21 SSLFKN--RSQYFRIAAMSIIFLTAFIRIFRYSSI-MGLNLDEAMGGYNSWSLAHYGVDS 77 Query: 72 NGVHLPIHLIAWGSGQNALYAYLSMPFIWLFGLTPLSVRALSLVMGL-------VGMIFF 124 P++L AWG+G N LY +S+PFI L GL+ ++ R +++ + VGM+ + Sbjct: 78 ALNRNPVYLYAWGTGMNLLYPLISVPFIKLIGLSLVAYRLPMVILSIGSIFSLVVGMLMY 137 Query: 125 YLSMRQLFPARAGGIFAMFFIAINPWHIMMSRWALESNLFPTLILIAVYCLL----KSFQ 180 L R + + A + ++PW IM +RW LESNLFP + A L K Sbjct: 138 KLPNRLILLSLAT-------VFLSPWSIMANRWGLESNLFPIIFTFAASAFLLFLSKQAN 190 Query: 181 TPK----WSYGFTVIMAISLYAYGTAYFFVPVFAICAAFLLLY-SRVLKFRTLVWNTVFF 235 PK + Y F ++A+S YAY +F +P F +C F LY + ++L Sbjct: 191 HPKQAKMYLYIFAFLIALSAYAYSNNWFMLPFF-VCGIFGYLYLKKKASLKSLSAPAFLI 249 Query: 236 VLLALPILLFIVINHYGFHEIATRLFTIPRLTMPRVEQISSVFGGELLHTASSNFSRFIE 295 +L+ P+LLF IN++ TIP+L+ R + G + ++ S+N +FI+ Sbjct: 250 LLIIWPLLLFAKINYFSGKTFKILSLTIPKLSSSRSNSELIIGHGNIFYSISNNIFKFIK 309 Query: 296 LLRSGSDGLPWNAISPYGYAYPIALPFALLGLIVMIYEVYQRRREGLGYITVLLWLGIAI 355 L+ +G+D L WN++ G YP F ++G+++ +++R + ++ + L I Sbjct: 310 LMVTGNDHLIWNSLPQIGILYPFMFIFCIVGIVI----AFKKRNDWDNFMLISLLSCFPI 365 Query: 356 LMALITDVNINRINIIFYPLIMLVA----------------TAVFSLYQKXXXXXXXXXX 399 +M I +N N +N + P++ A T VFSLY Sbjct: 366 VM--IIKINANHLNALMLPILYFEALGLYYSLKGPILKMAFTIVFSLY-----------F 412 Query: 400 XXXXMFGFFTNAYFGKFPKEIGPAFYDSLGEAIQYASETASGDIYVTDKVNMPYIYVLFY 459 F F + + + P+ LG+AI++A+++ + IY+T Y+ FY Sbjct: 413 VTFSFFYFHADQTLLTQGRTLTPSI---LGKAIRFANKSKAKKIYITCLPKGGYVIPRFY 469 Query: 460 EKINPHDFLASVKYINPGDAFQMVS---SFGRYKFGAP 494 I+P F P F+ S S+G++ F P Sbjct: 470 CPISPVAFNKE----KPNVTFKTESNYKSYGKWYFKQP 503 >Q1PZS2.1 Q1PZS2_9BACT Putative uncharacterized protein Length = 1336 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 78/205 (38%), Positives = 119/205 (58%), Gaps = 4/205 (1%) Query: 24 DNPWPLALFVLGAIVRIIYLGSIPSGLNQDEASIGYDAYAILHYGIDRNGVHLPIHLIAW 83 N + L + L +R+I L P+G DEASIGY+AY++L G D +G LP++ A+ Sbjct: 487 SNAYLLFIIFLAIFLRLINLHENPNGFYSDEASIGYNAYSVLQTGKDEHGTLLPLYFKAF 546 Query: 84 GSGQNALYAYLSMPFIWLFGLTPLSVRALSLVMGLVGMIFFYLSMRQLFPARAGGIFAMF 143 G +N +Y Y +PFI +FGL +VR + + G++ + F YL +++F R G++A F Sbjct: 547 GEYKNPVYIYAVIPFIKIFGLNVFAVRFTAAMFGMLTVFFTYLLAKEIFNKRV-GLWAAF 605 Query: 144 FIAINPWHIMMSRWALESNLFPTLILIAVYCLLKSFQTPKWSYGFTVIMAISLYAYGTAY 203 F+A+ PWHI SR A E+ P L I Y LLK + K+ I A++LY Y A Sbjct: 606 FLAVTPWHIQFSRIAFEAISLPCLFTIGYYFLLKGLKNGKYLLFSAAIFALTLYTYAPAK 665 Query: 204 FFVPVFAICAAFLLL-YSRVLKFRT 227 FVP+F + FL++ Y R+ + +T Sbjct: 666 LFVPLFLL--VFLIINYRRLFQHKT 688 >B7JYC3.1 B7JYC3_CYAP8 Glycosyl transferase family 39 Length = 522 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 113/204 (55%), Gaps = 9/204 (4%) Query: 29 LALFVLGAIVRIIYLGSIPSGLNQDEASIGYDAYAILHYGIDRNGVHLPIHLIAWGSGQN 88 L + + +VR+I+LG+IP+G DEAS YD+Y+ILH D+ G LP + + + Sbjct: 16 LVILIFALLVRVIFLGTIPNGFFTDEASYAYDSYSILHTLRDQYGKFLPWYFKSANDYRE 75 Query: 89 ALYAYLSMPFIWLFGLTPLSVRALSLVMGLVGMIFFYLSMRQLFPARAGGIFAMFFIAIN 148 LY YL +PFI +FGL P R S V+G + + Y +++F + G+ + F+AI Sbjct: 76 GLYMYLMIPFIKIFGLNPFGARITSAVIGTLTVFVLYHLAKEIFNQKV-GLLSALFLAIT 134 Query: 149 PWHIMMSRWALESNLFPTLILIAVYCLLKSFQTPKWSYGFTVIMAISLYAYGTAYFFVPV 208 PWHI SR +NL P L +++ +KSF+ PKW + + IS+Y Y +A FVP+ Sbjct: 135 PWHIHFSRITFRANLVPLLFCLSLLFFVKSFKEPKWLILSSPLFGISIYTYNSARVFVPL 194 Query: 209 FAICAAFLLLYSRVLKFRTLVWNT 232 F L V+ +R +WN Sbjct: 195 F--------LLGLVIIYRKHLWNN 210 >B4BWF5.1 B4BWF5_9CHRO Glycosyl transferase family 39 Length = 522 Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 74/204 (36%), Positives = 113/204 (55%), Gaps = 9/204 (4%) Query: 29 LALFVLGAIVRIIYLGSIPSGLNQDEASIGYDAYAILHYGIDRNGVHLPIHLIAWGSGQN 88 L + + +VR+I+LG+IP+G DEAS YD+Y+ILH D+ G LP + + + Sbjct: 16 LVILIFALLVRVIFLGTIPNGFFTDEASYAYDSYSILHTLRDQYGKFLPWYFKSANDYRE 75 Query: 89 ALYAYLSMPFIWLFGLTPLSVRALSLVMGLVGMIFFYLSMRQLFPARAGGIFAMFFIAIN 148 LY YL +PFI +FGL P R S V+G + + Y +++F + G+ + F+AI Sbjct: 76 GLYMYLMIPFIKIFGLNPFGARITSAVIGTLTVFVLYHLAKEIFNQKV-GLLSALFLAIT 134 Query: 149 PWHIMMSRWALESNLFPTLILIAVYCLLKSFQTPKWSYGFTVIMAISLYAYGTAYFFVPV 208 PWHI SR +NL P L +++ +KSF+ PKW + + IS+Y Y +A FVP+ Sbjct: 135 PWHIHFSRITFRANLVPLLFCLSLLFFVKSFKEPKWLILSSPLFGISIYTYNSARVFVPL 194 Query: 209 FAICAAFLLLYSRVLKFRTLVWNT 232 F L V+ +R +WN Sbjct: 195 F--------LLGLVIIYRKHLWNN 210 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.326 0.143 0.441 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,856,126,120 Number of extensions: 160325373 Number of successful extensions: 497024 Number of sequences better than 1.0e-05: 22 Number of HSP's gapped: 497032 Number of HSP's successfully gapped: 22 Length of query: 673 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 530 Effective length of database: 1,713,491,058 Effective search space: 908150260740 Effective search space used: 908150260740 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 135 (56.6 bits)