BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0509.0019.p
         (70 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B1D9G7.1 B1D9G7_9BACL Putative uncharacterized protein                 99   2e-19
B3KCA9.1 B3KCA9_9BACI Putative uncharacterized protein                 88   3e-16

>B1D9G7.1 B1D9G7_9BACL Putative uncharacterized protein
          Length = 71

 Score = 98.6 bits (244), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/69 (68%), Positives = 56/69 (81%)

Query: 1  MPINRPLLTDSDFQEAVDRKLPVRVFEDDHLVNSGATVIRFTDSDVVIQSRVSDLAYYSR 60
          M INR L TD DF+EAV RK PVRVF+DD +VN+G TVIRF D+ VVIQS VSDL YY+R
Sbjct: 1  MAINRRLTTDPDFEEAVKRKYPVRVFKDDFIVNNGGTVIRFDDNIVVIQSSVSDLVYYTR 60

Query: 61 STCQFYEVR 69
          + C+F+EVR
Sbjct: 61 AECEFFEVR 69


>B3KCA9.1 B3KCA9_9BACI Putative uncharacterized protein
          Length = 70

 Score = 87.8 bits (216), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 37/69 (53%), Positives = 54/69 (78%)

Query: 1  MPINRPLLTDSDFQEAVDRKLPVRVFEDDHLVNSGATVIRFTDSDVVIQSRVSDLAYYSR 60
          MPI RPLLTD DF E +++++ +R+F+D+HL++SG+ VIRFTD  V+ QS VS + Y+ R
Sbjct: 1  MPIVRPLLTDQDFLEVMEQQIRIRIFKDNHLIDSGSLVIRFTDDTVITQSSVSSIGYHKR 60

Query: 61 STCQFYEVR 69
            C+F+EVR
Sbjct: 61 DECEFFEVR 69


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.322    0.137    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 366,292,883
Number of extensions: 11197503
Number of successful extensions: 24099
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 24099
Number of HSP's successfully gapped: 2
Length of query: 70
Length of database: 3,060,696,203
Length adjustment: 41
Effective length of query: 29
Effective length of database: 2,674,434,588
Effective search space: 77558603052
Effective search space used: 77558603052
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 126 (53.1 bits)