BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0509.0009.p (146 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KGM4.1 B3KGM4_9BACI GCN5-related N-acetyltransferase 133 6e-30 B3K6A0.1 B3K6A0_9BACI GCN5-related N-acetyltransferase 78 3e-13 C2NJ22.1 C2NJ22_BACCE Acetyltransferase 75 2e-12 B3ZJ90.1 B3ZJ90_BACCE Acetyltransferase, GNAT family 75 2e-12 C1EYV9.1 C1EYV9_BACC3 Acetyltransferase, GNAT family 74 5e-12 >B3KGM4.1 B3KGM4_9BACI GCN5-related N-acetyltransferase Length = 143 Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust. Identities = 72/139 (51%), Positives = 99/139 (71%), Gaps = 5/139 (3%) Query: 1 MLVDLKQRTDTDEVKELLAYAVIDEPDALWRTSVEYGSKAALQLFGWEEEGLLIGLVGFE 60 ML D+ + E+KELL+Y+V +P+A+ + Y + +LFG+EE+GLL+G++GF+ Sbjct: 1 MLKDITMQASQPEIKELLSYSVFPDPEAVDEAAAFYQGGDS-RLFGYEEDGLLLGVIGFD 59 Query: 61 ETEDGSLEIRHIAVLPENRGKGYARGIILELLAARNPR--YLLAETEDEIAADFYRNLGF 118 ED L IRH+AVLPENRGKGY RG+ILELL P+ ++AET DE A +FYR++GF Sbjct: 60 VMED-ELIIRHLAVLPENRGKGYGRGLILELLLEMQPKPERVIAET-DEEAVNFYRSIGF 117 Query: 119 MVYSLGESPAGIEMFRCVY 137 VYSLGE G+E FRC+Y Sbjct: 118 EVYSLGEKYPGVERFRCIY 136 >B3K6A0.1 B3K6A0_9BACI GCN5-related N-acetyltransferase Length = 136 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 44/135 (32%), Positives = 78/135 (57%), Gaps = 2/135 (1%) Query: 2 LVDLKQRTDTDEVKELLAYAVIDEPDALWRTSVEYGSKAALQLFGWEEEGLLIGLVGFEE 61 ++DLK+ +T EV LLA + + + +++ +Y + + +L+G LIGL+G Sbjct: 1 MIDLKEYHET-EVSYLLAECMWPDNERIFQELNKYKADDSRKLYGRFMNNELIGLIGLIH 59 Query: 62 TEDGSLEIRHIAVLPENRGKGYARGIILELLAARNPRYLLAETEDEIAADFYRNLGFMVY 121 +E++HIA+ + R +G R +I E + ++AET ++ A +FYRN+GF + Sbjct: 60 LSTKEVELKHIAIRTDYRRQGIGRDMINEYIKKNEINKMIAETHED-AVNFYRNIGFEIM 118 Query: 122 SLGESPAGIEMFRCV 136 SLGE G+E F+C+ Sbjct: 119 SLGEKYPGVERFQCI 133 >C2NJ22.1 C2NJ22_BACCE Acetyltransferase Length = 135 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 6/129 (4%) Query: 7 QRTDTDEVKELLAYAVIDEPDALWRTSVEYGSKAALQLFGWEEEGLLIGLVGFEETEDGS 66 ++ + D + +L YAV +L + + Y L+ +EE+ +G E Sbjct: 7 EQIEKDSILNVLQYAVGPSETSLKKAVLFYERNKGT-LYRYEEQAC----IGIEIIGANK 61 Query: 67 LEIRHIAVLPENRGKGYARGIILELLAARNPRYLLAETEDEIAADFYRNLGFMVYSLGES 126 +IRHIAV+P+ R KG A +I E++ YL AET+DE AA+FY+ +GF V SLGE Sbjct: 62 AKIRHIAVIPQYRHKGIALQMIKEVVRVYQLTYLEAETDDE-AAEFYKKIGFQVRSLGEK 120 Query: 127 PAGIEMFRC 135 G+E F C Sbjct: 121 YPGVERFHC 129 >B3ZJ90.1 B3ZJ90_BACCE Acetyltransferase, GNAT family Length = 135 Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 6/129 (4%) Query: 7 QRTDTDEVKELLAYAVIDEPDALWRTSVEYGSKAALQLFGWEEEGLLIGLVGFEETEDGS 66 ++ + D + +L YAV +L + + Y L+ +EE+ +G E Sbjct: 7 EQIEKDSILNVLQYAVGPSETSLKKAVLFYERNKGT-LYRYEEQAC----IGIEIIGANK 61 Query: 67 LEIRHIAVLPENRGKGYARGIILELLAARNPRYLLAETEDEIAADFYRNLGFMVYSLGES 126 +IRHIAV+P+ R KG A +I E++ YL AET+DE AA+FY+ +GF V SLGE Sbjct: 62 AKIRHIAVIPQYRHKGIALQMIKEVVRVYQLTYLEAETDDE-AAEFYKKIGFQVRSLGEK 120 Query: 127 PAGIEMFRC 135 G+E F C Sbjct: 121 YPGVERFHC 129 >C1EYV9.1 C1EYV9_BACC3 Acetyltransferase, GNAT family Length = 135 Score = 73.9 bits (180), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 46/129 (35%), Positives = 69/129 (53%), Gaps = 6/129 (4%) Query: 7 QRTDTDEVKELLAYAVIDEPDALWRTSVEYGSKAALQLFGWEEEGLLIGLVGFEETEDGS 66 ++ + D + +L YAV +L + + Y L+ +EE+ +G E Sbjct: 7 EQIEKDSILNVLQYAVGPSETSLKKAVLFYERNKGT-LYRYEEQAC----IGIEIIGANK 61 Query: 67 LEIRHIAVLPENRGKGYARGIILELLAARNPRYLLAETEDEIAADFYRNLGFMVYSLGES 126 +IRHIAV+P+ R KG A +I E++ YL AET+DE A +FY+ +GF V SLGE Sbjct: 62 AKIRHIAVIPQYRHKGIALQMIKEVVRVYQLTYLEAETDDE-AVEFYKKIGFQVRSLGEK 120 Query: 127 PAGIEMFRC 135 G+E F C Sbjct: 121 YPGVERFHC 129 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.140 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 846,962,941 Number of extensions: 33830049 Number of successful extensions: 77213 Number of sequences better than 1.0e-05: 70 Number of HSP's gapped: 77194 Number of HSP's successfully gapped: 70 Length of query: 146 Length of database: 3,060,696,203 Length adjustment: 109 Effective length of query: 37 Effective length of database: 2,033,805,568 Effective search space: 75250806016 Effective search space used: 75250806016 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 125 (52.8 bits)