BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0505.0011.p (487 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B9E6D1.1 B9E6D1_CLOK1 Putative uncharacterized protein 162 9e-38 A5N2Q6.1 A5N2Q6_CLOK5 Putative uncharacterized protein 162 9e-38 C1I2N0.1 C1I2N0_9CLOT Putative uncharacterized protein 112 9e-23 Q0S6K1.1 Q0S6K1_RHOSR Putative uncharacterized protein 100 3e-19 A8RMD7.1 A8RMD7_9CLOT Putative uncharacterized protein 96 7e-18 >B9E6D1.1 B9E6D1_CLOK1 Putative uncharacterized protein Length = 493 Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 124/485 (25%), Positives = 211/485 (43%), Gaps = 30/485 (6%) Query: 5 LFYGKMPGVSXXXXXXXXXXXXXXXAKDKLRKPTVVSYIWLGAIMLLSLTYALFANWLFF 64 LF+ K PG+S +D++R + L I LLSL++A+ +F+ Sbjct: 31 LFFDKAPGISYSIFIGLCIGFFLWSIRDRIRMEKSFGWFLLIPIALLSLSFAVHTENIFY 90 Query: 65 GXXXXXXXXXXXXHMTCMLSYKLPSWSGPLMIGAAAEHLFAQSLRHWGTAPRIIR---RM 121 +++ L W I A L + RI++ ++ Sbjct: 91 LLNFLAVPILMIASSILIVNSSLK-WDKSSFISEMLRKGIANVLNNITKPFRILKASIKI 149 Query: 122 FGGGKLQDERKQVVIKXXXXXXXXXXXXXXXXXXXXXADGVFHELLAGIPRMLERLSFGE 181 ++++ +KQ++I AD +F LA + ++ ++ E Sbjct: 150 ERTVQMEEGKKQILIGILVSLPLLAILIILLSS----ADMIFGYYLANLTKIFNNINIEE 205 Query: 182 GFARLLWVLLLGTGMFGLLWGFVDHKVYVWNPKPELNMEDGPSAEPLNELLPQPLTLKVD 241 + L++ +FG +WGF K E + + ++L P + + Sbjct: 206 FVPHTIITLVISFYLFGYVWGF----------KSE--------EKTIGKVLDAP-AVSWE 246 Query: 242 PXXXXXXXXXXXXXXXXFVSLQFSYLFGAWEGILPEGSTYADYARSGFLELILVTSINFV 301 F +QFSYL+G LP TYA+YAR GF EL T INF+ Sbjct: 247 TVTIITVLAALNILYLIFTIIQFSYLYGGNNIALPADFTYAEYARKGFFELTAATFINFI 306 Query: 302 LLLLSLHSTGPAAARLRTIINTLLYILVLCSVVMLYSAYSRLALYEEAYGYTYIRFLVHA 361 ++L L RL I N LL +LV ++ ML+SA +L LYE A+GYT++R VH Sbjct: 307 IVLSCLKYIKKDNKRLLKIANLLLTVLVAFTLNMLFSANFKLTLYEAAFGYTFLRVSVHL 366 Query: 362 FMIFLGLLLVLAAVRISRVQFPLAPCCLALGLFSYVLINYIGMDHIIAEQNIQRYETSGI 421 FM+ L +L ++ A I + P+ + + + Y +INY+ +D IA +NI+RY +G Sbjct: 367 FMLLLFILYLVVAAGIWYRKIPIVKSIIVITIIMYTIINYLNIDGFIARKNIERYNETGK 426 Query: 422 LDSSYLSRLSPDVTPLLVDFSKQNNGKLDEILREQWDNRTQA---ARSWPSFNAARFRAE 478 LD+ YL+ LS + P L+ +++ + ++ + R + SW FN ++ R Sbjct: 427 LDAYYLTTLSFEAVPYLIKLRDKSDSHVKMVIDKNLKYRKEVLDKQNSWTEFNFSKNRTR 486 Query: 479 RALEH 483 + L Sbjct: 487 KLLNQ 491 >A5N2Q6.1 A5N2Q6_CLOK5 Putative uncharacterized protein Length = 493 Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust. Identities = 124/485 (25%), Positives = 211/485 (43%), Gaps = 30/485 (6%) Query: 5 LFYGKMPGVSXXXXXXXXXXXXXXXAKDKLRKPTVVSYIWLGAIMLLSLTYALFANWLFF 64 LF+ K PG+S +D++R + L I LLSL++A+ +F+ Sbjct: 31 LFFDKAPGISYSIFIGLCIGFFLWSIRDRIRMEKSFGWFLLIPIALLSLSFAVHTENIFY 90 Query: 65 GXXXXXXXXXXXXHMTCMLSYKLPSWSGPLMIGAAAEHLFAQSLRHWGTAPRIIR---RM 121 +++ L W I A L + RI++ ++ Sbjct: 91 LLNFLAVPILMIASSILIVNSSLK-WDKSSFISEMLRKGIANVLNNITKPFRILKASIKI 149 Query: 122 FGGGKLQDERKQVVIKXXXXXXXXXXXXXXXXXXXXXADGVFHELLAGIPRMLERLSFGE 181 ++++ +KQ++I AD +F LA + ++ ++ E Sbjct: 150 ERTVQMEEGKKQILIGILVSLPLLAILIILLSS----ADMIFGYYLANLTKIFNNINIEE 205 Query: 182 GFARLLWVLLLGTGMFGLLWGFVDHKVYVWNPKPELNMEDGPSAEPLNELLPQPLTLKVD 241 + L++ +FG +WGF K E + + ++L P + + Sbjct: 206 FVPHTIITLVISFYLFGYVWGF----------KSE--------EKTIGKVLDAP-AVSWE 246 Query: 242 PXXXXXXXXXXXXXXXXFVSLQFSYLFGAWEGILPEGSTYADYARSGFLELILVTSINFV 301 F +QFSYL+G LP TYA+YAR GF EL T INF+ Sbjct: 247 TVTIITVLAALNILYLIFTIIQFSYLYGGNNIALPADFTYAEYARKGFFELTAATFINFI 306 Query: 302 LLLLSLHSTGPAAARLRTIINTLLYILVLCSVVMLYSAYSRLALYEEAYGYTYIRFLVHA 361 ++L L RL I N LL +LV ++ ML+SA +L LYE A+GYT++R VH Sbjct: 307 IVLSCLKYIKKDNKRLLKIANLLLTVLVAFTLNMLFSANFKLTLYEAAFGYTFLRVSVHL 366 Query: 362 FMIFLGLLLVLAAVRISRVQFPLAPCCLALGLFSYVLINYIGMDHIIAEQNIQRYETSGI 421 FM+ L +L ++ A I + P+ + + + Y +INY+ +D IA +NI+RY +G Sbjct: 367 FMLLLFILYLVVAAGIWYRKIPIVKSIIVITIIMYTIINYLNIDGFIARKNIERYNETGK 426 Query: 422 LDSSYLSRLSPDVTPLLVDFSKQNNGKLDEILREQWDNRTQA---ARSWPSFNAARFRAE 478 LD+ YL+ LS + P L+ +++ + ++ + R + SW FN ++ R Sbjct: 427 LDAYYLTTLSFEAVPYLIKLRDKSDSHVKMVIDKNLKYRKEVLDKQNSWTEFNFSKNRTR 486 Query: 479 RALEH 483 + L Sbjct: 487 KLLNQ 491 >C1I2N0.1 C1I2N0_9CLOT Putative uncharacterized protein Length = 485 Score = 112 bits (280), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 101/441 (22%), Positives = 185/441 (41%), Gaps = 33/441 (7%) Query: 34 LRKPTVVSYIWLGAIMLLSLTYALFANWLFFGXXXXXXXXXXXXHMTCMLSYKLPSWSGP 93 ++ + + Y ++ + ++LS TY +F N FF +L++K + Sbjct: 67 VKNKSFLGYFFVASSIILSFTYGIFTNE-FFRVLNLLVIPISLFSGFLLLTFKNIEFK-- 123 Query: 94 LMIGAAA---EHLFAQSLRHWGTAPRIIRRMFGGGKLQDERKQVVIKXXXXXXXXXXXXX 150 +IG E + QSL + P ++R G ++ E + Sbjct: 124 -LIGFGTSFLEIIIGQSLSNSTKIPSVLRETLKKGNIKKENNHIK-SILIGLLISIPLII 181 Query: 151 XXXXXXXXADGVFHELLAGIPRMLERLSFGEGFARLLWVLLLGTGMFGLLWGFVDHKVYV 210 AD +F LA I R L + + + + +++ +FGL Y Sbjct: 182 ILGILLAGADEIFSYYLANIWRYLNIENIYDFILKAIIAIIIMFLVFGLF--------YS 233 Query: 211 WNPKPELNMEDGPSAEPLNELLPQPLTLKVDPXXXXXXXXXXXXXXXXFVSLQFSYLFGA 270 N ++++ + N + + + F +Q SYL+ Sbjct: 234 LNCTEVRDVQNNSIKKDFNSTTIITILISITILYLV------------FTKIQISYLY-- 279 Query: 271 WEGILPEGSTYADYARSGFLELILVTSINFVLLLLSLHSTGPAAARLRTIINTLLYILVL 330 LP G +ADYAR GF +L+ + +N ++ + T R++ ++N+L I+ + Sbjct: 280 LNKALPAGFNFADYARDGFFQLVALVIVNLSMITIMNFKTSANNRRVKNVLNSLYSIITV 339 Query: 331 CSVVMLYSAYSRLALYEEAYGYTYIRFLVHAFMIFLGLLLVLAAVRISRVQFPLAPCCLA 390 ++ M SA ++ LY E +GYT +R LV AF +FL + L++ I R ++ P + Sbjct: 340 LTINMGASAIYKMNLYIEEFGYTRLRILVQAFTVFLCISLIILLAFIWRGKYLFKPTAI- 398 Query: 391 LGLFSYVLINYIGMDHIIAEQNIQRYETSGILDSSYLSRLSPDVTPLLVDFSKQNNGKLD 450 +GL Y+ +NYI +D+ I QNI T +D YL+RLS D + + + G ++ Sbjct: 399 VGLTIYLCLNYINIDNYIVRQNINIINTKHEIDDRYLTRLSLDAQDAVKE--GYDKGLIE 456 Query: 451 EILREQWDNRTQAARSWPSFN 471 W N+ + W +N Sbjct: 457 SKYYYDWYNKRAITKHWYEYN 477 >Q0S6K1.1 Q0S6K1_RHOSR Putative uncharacterized protein Length = 495 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 77/234 (32%), Positives = 123/234 (52%), Gaps = 18/234 (7%) Query: 259 FVSLQFSYLFGAWEGILPEGS-TYADYARSGFLELILVTSINFVLLLLSLHSTGPAAARL 317 FV++Q + LFG +L TYA+YAR GF +L+ VT++ V++ +++ Sbjct: 262 FVAVQLTVLFGGSTHVLTTADLTYAEYARQGFWQLLAVTALTLVVIAVAVRKAARVEVVD 321 Query: 318 RTIINTLLYILVLCSVVMLYSAYSRLALYEEAYGYTYIRFLVHAFMIFLGL---LLVLAA 374 R ++ LL +L + ++V++ SA R++LYE YGYT +R V ++LGL LL+ A Sbjct: 322 RILVRVLLGLLCVLTLVIVASAIHRMSLYENQYGYTRLRVTVTVTELWLGLVFVLLIAAG 381 Query: 375 VRISRVQFPLAPCCLALGLFSYVLINYIGMDHIIAEQNIQRYETSGILDSSYLSRLSPDV 434 VR+S P A A+G +L+ I D +A +N++R+ +G +D SYL LS D Sbjct: 382 VRLSGRWLPRAVLASAVG--GVLLLAAIDPDAYVARKNVERFGETGRIDVSYLDSLSVDA 439 Query: 435 TPLLVDFSKQNNGKLDEILRE----QWDNRTQAARSWPSFNAARFRAERALEHY 484 P L +L E R + D + + W +NAAR RA+ L + Sbjct: 440 VPAL--------DRLPEPERSCALYRLDRQVRGESQWYEYNAARSRAKELLAAH 485 >A8RMD7.1 A8RMD7_9CLOT Putative uncharacterized protein Length = 499 Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 6/180 (3%) Query: 259 FVSLQFSYLFGAWEGILPEGSTYADYARSGFLELILVTSINFVLLLLSLHSTGPAAARLR 318 F +Q YLF +G LPEG TY+ YAR GF +L+ V +N V++L+ L R Sbjct: 281 FCVIQIVYLFMG-KGSLPEGMTYSQYARQGFFQLLFVAVLNLVMVLMCLKYF-----REH 334 Query: 319 TIINTLLYILVLCSVVMLYSAYSRLALYEEAYGYTYIRFLVHAFMIFLGLLLVLAAVRIS 378 ++N L ++ LC+ VML SA R+ LY + Y T++R LV F+ L +L+ + I Sbjct: 335 VLLNGFLLLVSLCTYVMLASAVYRMVLYVQQYQLTFLRILVLWFLAMLFVLMAGVVILIF 394 Query: 379 RVQFPLAPCCLALGLFSYVLINYIGMDHIIAEQNIQRYETSGILDSSYLSRLSPDVTPLL 438 +FPL CLA+ Y++ ++ D+I A N+ ++ ++ S RLS D P L Sbjct: 395 NHEFPLFRFCLAVVSSFYLVFAWMRPDYITARYNVAHRDSIAGVEQSDFMRLSTDAAPAL 454 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.326 0.142 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,543,409,418 Number of extensions: 95567828 Number of successful extensions: 295807 Number of sequences better than 1.0e-05: 53 Number of HSP's gapped: 295768 Number of HSP's successfully gapped: 53 Length of query: 487 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 347 Effective length of database: 1,741,754,103 Effective search space: 604388673741 Effective search space used: 604388673741 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 133 (55.8 bits)