BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0505.0007.p (368 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1Q2N9.1 B1Q2N9_9BACL Putative glycosidase 682 0.0 B1Q2N7.1 B1Q2N7_9BACL Putative glycosidase 677 0.0 C4E6Y9.1 C4E6Y9_STRRS Putative carbohydrate binding protein 632 e-179 B1VLR0.1 B1VLR0_STRGG Putative membrane protein 615 e-174 B5H8T7.1 B5H8T7_STRPR Secreted glycosyl hydrolase 610 e-173 >B1Q2N9.1 B1Q2N9_9BACL Putative glycosidase Length = 1304 Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/368 (88%), Positives = 342/368 (92%) Query: 1 MDTTGTLAGVYLPAGTYQTTSKFQVYGKAVKVIGAGPWYTRFVAPASQENTDVGFRAEAS 60 MDTTG L GVYLPAG YQT+SKFQVYGKAVK+IGAGPWYTRF AP +QENTD+GFRA + Sbjct: 937 MDTTGNLVGVYLPAGNYQTSSKFQVYGKAVKIIGAGPWYTRFYAPTNQENTDIGFRASDT 996 Query: 61 ANGSTFANFAYFGNYTSRIDGPGKVFDFSNVANITIDNIWTEHQVCMYWGANTDYMVIKN 120 ANGSTFANFAYFGNYTSRIDGPGKVFDFSNVANITIDNIWTEHQVCMYWGANTDYMVIKN Sbjct: 997 ANGSTFANFAYFGNYTSRIDGPGKVFDFSNVANITIDNIWTEHQVCMYWGANTDYMVIKN 1056 Query: 121 SRIRNTFADGINMTNGSTNNLVSNNEARATGDDSFALFSAIDSGGSDMKDNVYENLTSIL 180 SRIRNTFADGINMTNGSTNNLVSN EARATGDDSFALFSAIDSGG+DMKDN+YENLTSIL Sbjct: 1057 SRIRNTFADGINMTNGSTNNLVSNIEARATGDDSFALFSAIDSGGADMKDNIYENLTSIL 1116 Query: 181 TWRAAGIAVYGGYANTFRNIYIADTLCYAGITISSLDFGYPMNGFGASPTTDLQNISIER 240 TWRAAG+AVYGGYANTFRNIYIADTLCY+GITISSLDFGYPMNGFGASPT++ +NISI R Sbjct: 1117 TWRAAGVAVYGGYANTFRNIYIADTLCYSGITISSLDFGYPMNGFGASPTSNFENISIVR 1176 Query: 241 AGGHFWNGQTFPAIWVFSASKIFQGIRVSDVDITDPTYHGIMFQTNYFASAPQFPVADTI 300 AGGHFW QTFPAIWVFSASK+FQGIRVSDVDI DPTYHGIMFQTNY S PQFPV DT+ Sbjct: 1177 AGGHFWGAQTFPAIWVFSASKVFQGIRVSDVDIIDPTYHGIMFQTNYVGSTPQFPVTDTL 1236 Query: 301 FTNITISGAQKSGDAFDAKSGVGIWANESAEPGQGPAVGSVVFNNLKITNTVTPVKNTTS 360 FTN+TISGAQKSGDAFD+KSGVGIW NE+AE GQGPA GS FNNLKITNTVT +KN TS Sbjct: 1237 FTNVTISGAQKSGDAFDSKSGVGIWVNEAAEAGQGPARGSATFNNLKITNTVTNIKNNTS 1296 Query: 361 TFKITVNP 368 TF I VNP Sbjct: 1297 TFTINVNP 1304 >B1Q2N7.1 B1Q2N7_9BACL Putative glycosidase Length = 1280 Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/368 (87%), Positives = 340/368 (92%) Query: 1 MDTTGTLAGVYLPAGTYQTTSKFQVYGKAVKVIGAGPWYTRFVAPASQENTDVGFRAEAS 60 MDTTG L GVYLP G YQT++KFQVYGKAVKVIGAGPWYTRF+AP +QENTDVGFRA + Sbjct: 913 MDTTGNLVGVYLPPGNYQTSNKFQVYGKAVKVIGAGPWYTRFIAPTNQENTDVGFRASDT 972 Query: 61 ANGSTFANFAYFGNYTSRIDGPGKVFDFSNVANITIDNIWTEHQVCMYWGANTDYMVIKN 120 ANGSTFANFAYFGNYTSRIDGPGKVFDFSNVANITIDNIWTEHQVCMYWGANTD MVIKN Sbjct: 973 ANGSTFANFAYFGNYTSRIDGPGKVFDFSNVANITIDNIWTEHQVCMYWGANTDNMVIKN 1032 Query: 121 SRIRNTFADGINMTNGSTNNLVSNNEARATGDDSFALFSAIDSGGSDMKDNVYENLTSIL 180 SRIRNTFADGINMTNGSTNNLVSN EARATGDDSFALFSAIDSGG+DMKDNVYENLTSIL Sbjct: 1033 SRIRNTFADGINMTNGSTNNLVSNIEARATGDDSFALFSAIDSGGADMKDNVYENLTSIL 1092 Query: 181 TWRAAGIAVYGGYANTFRNIYIADTLCYAGITISSLDFGYPMNGFGASPTTDLQNISIER 240 TWRAAG+AVYGGYANTFRNIYIADTLCY+GITISSLDFGYPMNGFGASPTT+ +NISI R Sbjct: 1093 TWRAAGVAVYGGYANTFRNIYIADTLCYSGITISSLDFGYPMNGFGASPTTNFENISIVR 1152 Query: 241 AGGHFWNGQTFPAIWVFSASKIFQGIRVSDVDITDPTYHGIMFQTNYFASAPQFPVADTI 300 AGGHFW QTFPAIWVFSASK+FQGIRV+DVDI DPTYHGIMFQTNY S PQFPV DTI Sbjct: 1153 AGGHFWGAQTFPAIWVFSASKVFQGIRVNDVDIIDPTYHGIMFQTNYVGSTPQFPVTDTI 1212 Query: 301 FTNITISGAQKSGDAFDAKSGVGIWANESAEPGQGPAVGSVVFNNLKITNTVTPVKNTTS 360 F N+TI+GAQKSGDAFD+KSGVGIW NE+AE GQGPA GS FNNLKITNTVT +KN TS Sbjct: 1213 FNNVTITGAQKSGDAFDSKSGVGIWVNEAAEAGQGPARGSATFNNLKITNTVTNIKNNTS 1272 Query: 361 TFKITVNP 368 TF I VNP Sbjct: 1273 TFTINVNP 1280 >C4E6Y9.1 C4E6Y9_STRRS Putative carbohydrate binding protein Length = 1200 Score = 632 bits (1630), Expect = e-179, Method: Compositional matrix adjust. Identities = 300/368 (81%), Positives = 325/368 (88%) Query: 1 MDTTGTLAGVYLPAGTYQTTSKFQVYGKAVKVIGAGPWYTRFVAPASQENTDVGFRAEAS 60 MD+TGTL GVYLP GTYQT SKFQVYGKAVKV+GAGPWYT+F AP +Q+NTDVGFRAE + Sbjct: 833 MDSTGTLVGVYLPPGTYQTASKFQVYGKAVKVVGAGPWYTQFRAPTTQDNTDVGFRAEGT 892 Query: 61 ANGSTFANFAYFGNYTSRIDGPGKVFDFSNVANITIDNIWTEHQVCMYWGANTDYMVIKN 120 ANGS+FANFAYFGNYTSRIDGPGKVFDFSNVA++ IDNIW EH VC+YWGANTD + IKN Sbjct: 893 ANGSSFANFAYFGNYTSRIDGPGKVFDFSNVADVVIDNIWNEHMVCLYWGANTDRVTIKN 952 Query: 121 SRIRNTFADGINMTNGSTNNLVSNNEARATGDDSFALFSAIDSGGSDMKDNVYENLTSIL 180 SRIRN FADGINMTNGST+N V NNEARATGDDSFALFSAID+GG+DMK NVYENLTSIL Sbjct: 953 SRIRNMFADGINMTNGSTDNHVVNNEARATGDDSFALFSAIDAGGADMKGNVYENLTSIL 1012 Query: 181 TWRAAGIAVYGGYANTFRNIYIADTLCYAGITISSLDFGYPMNGFGASPTTDLQNISIER 240 TWRAAG+AVYGGY N FRNIYIADTL Y+GITISSLDFGYPMNGFGA P T +NISI R Sbjct: 1013 TWRAAGVAVYGGYDNVFRNIYIADTLVYSGITISSLDFGYPMNGFGADPPTRFENISIVR 1072 Query: 241 AGGHFWNGQTFPAIWVFSASKIFQGIRVSDVDITDPTYHGIMFQTNYFASAPQFPVADTI 300 AGGHFW QTFPAIWVFSASK+FQGIRVSDVDI DPTY GIMFQTNY PQFPV DT+ Sbjct: 1073 AGGHFWGAQTFPAIWVFSASKVFQGIRVSDVDIVDPTYSGIMFQTNYVGGQPQFPVKDTV 1132 Query: 301 FTNITISGAQKSGDAFDAKSGVGIWANESAEPGQGPAVGSVVFNNLKITNTVTPVKNTTS 360 FT+I+ISGA+KSGDAFDAKSG GIW NE EPGQGPAVGSV FNNL+++N T VKNTTS Sbjct: 1133 FTDISISGARKSGDAFDAKSGFGIWVNEMPEPGQGPAVGSVTFNNLRMSNNATNVKNTTS 1192 Query: 361 TFKITVNP 368 TF I NP Sbjct: 1193 TFTIITNP 1200 >B1VLR0.1 B1VLR0_STRGG Putative membrane protein Length = 1429 Score = 615 bits (1585), Expect = e-174, Method: Compositional matrix adjust. Identities = 286/368 (77%), Positives = 325/368 (88%), Gaps = 1/368 (0%) Query: 1 MDTTGTLAGVYLPAGTYQTTSKFQVYGKAVKVIGAGPWYTRFVAPASQENTDVGFRAEAS 60 MDTTGTL GVYLPAG Y T SKFQVYGKAVKV+GAGPWYTRF AP++Q+NTDVGFRAEAS Sbjct: 1063 MDTTGTLVGVYLPAGQYTTASKFQVYGKAVKVVGAGPWYTRFNAPSTQDNTDVGFRAEAS 1122 Query: 61 ANGSTFANFAYFGNYTSRIDGPGKVFDFSNVANITIDNIWTEHQVCMYWGANTDYMVIKN 120 A GS+FANFAYFGNYTSRIDGPGKVFDFSNV++I IDNIW EH VC+YWGANTD + IKN Sbjct: 1123 AKGSSFANFAYFGNYTSRIDGPGKVFDFSNVSDIVIDNIWNEHMVCLYWGANTDSVTIKN 1182 Query: 121 SRIRNTFADGINMTNGSTNNLVSNNEARATGDDSFALFSAIDSGGSDMKDNVYENLTSIL 180 SRIRN FADG+NMTNGST+NLV+NNEARATGDDSFALFSAID+GG+DMK+NVYENLTSIL Sbjct: 1183 SRIRNMFADGVNMTNGSTDNLVTNNEARATGDDSFALFSAIDAGGADMKNNVYENLTSIL 1242 Query: 181 TWRAAGIAVYGGYANTFRNIYIADTLCYAGITISSLDFGYPMNGFGASPTTDLQNISIER 240 TWRAAG+AVYGGY NTFRNI+IADTL Y+GIT+SSLDFGYPMNGFG PT ++N+SI R Sbjct: 1243 TWRAAGVAVYGGYDNTFRNIHIADTLVYSGITVSSLDFGYPMNGFGTGPTR-IENVSIVR 1301 Query: 241 AGGHFWNGQTFPAIWVFSASKIFQGIRVSDVDITDPTYHGIMFQTNYFASAPQFPVADTI 300 AGGHFW QTFP IW+FSASK+FQGIR+++VDI DPTY GIMFQTNY PQFP+ DT+ Sbjct: 1302 AGGHFWGSQTFPGIWLFSASKVFQGIRINNVDIVDPTYSGIMFQTNYVGGQPQFPIKDTV 1361 Query: 301 FTNITISGAQKSGDAFDAKSGVGIWANESAEPGQGPAVGSVVFNNLKITNTVTPVKNTTS 360 T+++ISGA+KSGDAFDAKSG G+WANE E GQGPAVG V FN LK+++ ++NTTS Sbjct: 1362 LTDVSISGARKSGDAFDAKSGFGLWANEMPEAGQGPAVGEVTFNGLKLSDNAQDIRNTTS 1421 Query: 361 TFKITVNP 368 TFKI NP Sbjct: 1422 TFKIINNP 1429 >B5H8T7.1 B5H8T7_STRPR Secreted glycosyl hydrolase Length = 1416 Score = 610 bits (1574), Expect = e-173, Method: Compositional matrix adjust. Identities = 282/368 (76%), Positives = 324/368 (88%), Gaps = 1/368 (0%) Query: 1 MDTTGTLAGVYLPAGTYQTTSKFQVYGKAVKVIGAGPWYTRFVAPASQENTDVGFRAEAS 60 MDTTG L GVYLPAG Y+T+SKFQVYGKAV+V GAGPWYT+F AP++Q+NTD+GFRAEAS Sbjct: 1050 MDTTGKLVGVYLPAGDYETSSKFQVYGKAVQVTGAGPWYTKFRAPSTQDNTDIGFRAEAS 1109 Query: 61 ANGSTFANFAYFGNYTSRIDGPGKVFDFSNVANITIDNIWTEHQVCMYWGANTDYMVIKN 120 A GS+F NFAYFGNYTSRIDGPGKVFDF+NV++I IDNIW EH VC+YWGANTD + +KN Sbjct: 1110 AKGSSFRNFAYFGNYTSRIDGPGKVFDFANVSDIVIDNIWNEHMVCLYWGANTDRITVKN 1169 Query: 121 SRIRNTFADGINMTNGSTNNLVSNNEARATGDDSFALFSAIDSGGSDMKDNVYENLTSIL 180 SRIRN FADG+NMTNGST+NLVSNNEARATGDDSFALFSAID+GG+DMK+NVYENLTSIL Sbjct: 1170 SRIRNMFADGVNMTNGSTDNLVSNNEARATGDDSFALFSAIDAGGADMKNNVYENLTSIL 1229 Query: 181 TWRAAGIAVYGGYANTFRNIYIADTLCYAGITISSLDFGYPMNGFGASPTTDLQNISIER 240 TWRAAGIAVYGGY NTFRNI+IADTL Y+GITISSLDFGYPMNGFG PTT ++N+S+ R Sbjct: 1230 TWRAAGIAVYGGYDNTFRNIHIADTLVYSGITISSLDFGYPMNGFGTGPTT-VENVSVVR 1288 Query: 241 AGGHFWNGQTFPAIWVFSASKIFQGIRVSDVDITDPTYHGIMFQTNYFASAPQFPVADTI 300 AGGHFW QTFP IW+FSA K+FQGIRVS+VDI DPTY GIMFQT Y P+FP+ DT+ Sbjct: 1289 AGGHFWGAQTFPGIWLFSADKVFQGIRVSNVDIVDPTYSGIMFQTKYEGGQPEFPIKDTV 1348 Query: 301 FTNITISGAQKSGDAFDAKSGVGIWANESAEPGQGPAVGSVVFNNLKITNTVTPVKNTTS 360 FT+I+ISGA+KSGDAFDAKSG G+WANE E GQGPAVG V FN L+++ ++NTTS Sbjct: 1349 FTDISISGARKSGDAFDAKSGFGLWANEMPESGQGPAVGEVTFNGLRLSGNAQDIRNTTS 1408 Query: 361 TFKITVNP 368 TFKI +NP Sbjct: 1409 TFKININP 1416 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.133 0.402 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,321,287,677 Number of extensions: 101183355 Number of successful extensions: 230128 Number of sequences better than 1.0e-05: 79 Number of HSP's gapped: 229954 Number of HSP's successfully gapped: 79 Length of query: 368 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 231 Effective length of database: 1,770,017,148 Effective search space: 408873961188 Effective search space used: 408873961188 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)