BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0504.0034.p (298 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B7IPP6.1 B7IPP6_BACC2 6-phosphogluconate dehydrogenase, decarbox... 498 e-139 Q81B20.1 Q81B20_BACCR 6-phosphogluconate dehydrogenase, decarbox... 496 e-139 C2T3I5.1 C2T3I5_BACCE Putative uncharacterized protein 496 e-139 C2RQP6.1 C2RQP6_BACCE Putative uncharacterized protein 496 e-139 C2U024.1 C2U024_BACCE Putative uncharacterized protein 496 e-138 >B7IPP6.1 B7IPP6_BACC2 6-phosphogluconate dehydrogenase, decarboxylating EC=1.1.1.44 Length = 297 Score = 498 bits (1282), Expect = e-139, Method: Compositional matrix adjust. Identities = 233/297 (78%), Positives = 265/297 (89%) Query: 1 MKVGLIGLGKMGANLGRNLLDHGHEVVAFDVNREAVSELESKGAAGADSLAGLVSKLGVP 60 M+VGLIGLGKMG NLG+NL+DH HEVVAFD+N AV E++ GA G SL+ LV L P Sbjct: 1 MQVGLIGLGKMGLNLGKNLMDHKHEVVAFDLNTSAVEEMKEYGATGTSSLSELVQSLQSP 60 Query: 61 RIAWIMVPHAFVDSVIEELAPLLSKGDIIIEAGNSQYKESIRRHGELAQQGIYFLDAGTS 120 RI W+MVPHA VDSVI+E+ PLLSKGDI+IEAGNS YKESIRR+ +L + GI+F+DAGTS Sbjct: 61 RILWVMVPHAVVDSVIDEVTPLLSKGDILIEAGNSHYKESIRRYEQLKKDGIHFMDAGTS 120 Query: 121 GGMEGARNGACYMVGGDEEAWAVAEPLFRDTAVQDGYLFAGKPGSGHFLKMVHNGIEYGM 180 GGMEGARNGACYM+GGD+EAW + EP+FRDTAV++GYL+AGK GSGHFLKM+HNGIEYGM Sbjct: 121 GGMEGARNGACYMIGGDQEAWDIVEPIFRDTAVENGYLYAGKAGSGHFLKMIHNGIEYGM 180 Query: 181 MAAIGEGFEVLEKSGFDYNFEQVARVWNNGSVIRSWLMELVERAFSKDAKLDEIKGVMHS 240 MAAIGEGFEVLEKS FDY++E+V+RVWNNGSVIRSWLMEL E AFSKDAKLDEIKGVMHS Sbjct: 181 MAAIGEGFEVLEKSEFDYDYEKVSRVWNNGSVIRSWLMELTENAFSKDAKLDEIKGVMHS 240 Query: 241 SGEGRWTLETAFDLQAATPVIAMALLMRYRSLETDTFTGKVVAALRNEFGGHAVETK 297 SGEG+WT+ETA DLQ ATPVIAM+LLMRYRSL+ DTFTGKVVAALRNEFGGHAVE K Sbjct: 241 SGEGKWTVETALDLQTATPVIAMSLLMRYRSLDNDTFTGKVVAALRNEFGGHAVEKK 297 >Q81B20.1 Q81B20_BACCR 6-phosphogluconate dehydrogenase, decarboxylating EC=1.1.1.44 Length = 297 Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust. Identities = 232/297 (78%), Positives = 265/297 (89%) Query: 1 MKVGLIGLGKMGANLGRNLLDHGHEVVAFDVNREAVSELESKGAAGADSLAGLVSKLGVP 60 M+VGLIGLGKMG NLG+NL+DH HEVVAFD+N AV E++ GA G SL+ LV L P Sbjct: 1 MQVGLIGLGKMGLNLGKNLMDHKHEVVAFDLNTSAVEEMKEYGATGTSSLSELVQSLQSP 60 Query: 61 RIAWIMVPHAFVDSVIEELAPLLSKGDIIIEAGNSQYKESIRRHGELAQQGIYFLDAGTS 120 RI W+MVPHA VDSVI+E+ PLLSKGDI+IEAGNS YKESIRR+ +L + GI+F+DAGTS Sbjct: 61 RILWVMVPHAVVDSVIDEVTPLLSKGDILIEAGNSHYKESIRRYEQLKEDGIHFMDAGTS 120 Query: 121 GGMEGARNGACYMVGGDEEAWAVAEPLFRDTAVQDGYLFAGKPGSGHFLKMVHNGIEYGM 180 GGMEGARNGACYM+GGD+EAW + EP+FRDTAV++G+L+AGK GSGHFLKMVHNGIEYGM Sbjct: 121 GGMEGARNGACYMIGGDQEAWDIVEPIFRDTAVENGFLYAGKAGSGHFLKMVHNGIEYGM 180 Query: 181 MAAIGEGFEVLEKSGFDYNFEQVARVWNNGSVIRSWLMELVERAFSKDAKLDEIKGVMHS 240 MAAIGEGFE+LEKS FDY++E+V+RVWNNGSVIRSWLMEL E AFSKDAKLDEIKGVMHS Sbjct: 181 MAAIGEGFEILEKSEFDYDYEKVSRVWNNGSVIRSWLMELTENAFSKDAKLDEIKGVMHS 240 Query: 241 SGEGRWTLETAFDLQAATPVIAMALLMRYRSLETDTFTGKVVAALRNEFGGHAVETK 297 SGEG+WT+ETA DLQ ATPVIAM+LLMRYRSL+ DTFTGKVVAALRNEFGGHAVE K Sbjct: 241 SGEGKWTVETALDLQTATPVIAMSLLMRYRSLDNDTFTGKVVAALRNEFGGHAVEKK 297 >C2T3I5.1 C2T3I5_BACCE Putative uncharacterized protein Length = 297 Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust. Identities = 232/297 (78%), Positives = 265/297 (89%) Query: 1 MKVGLIGLGKMGANLGRNLLDHGHEVVAFDVNREAVSELESKGAAGADSLAGLVSKLGVP 60 M+VGLIGLGKMG NLG+NL+DH HEVVAFD+N AV E++ GA G SL+ LV L P Sbjct: 1 MQVGLIGLGKMGLNLGKNLMDHKHEVVAFDLNTSAVEEMKEYGATGTSSLSELVQSLQSP 60 Query: 61 RIAWIMVPHAFVDSVIEELAPLLSKGDIIIEAGNSQYKESIRRHGELAQQGIYFLDAGTS 120 RI W+MVPHA VDSVI+E+ PLLSKGDI+IEAGNS YKESIRR+ +L + GI+F+DAGTS Sbjct: 61 RILWVMVPHAVVDSVIDEVTPLLSKGDILIEAGNSHYKESIRRYEQLKEDGIHFMDAGTS 120 Query: 121 GGMEGARNGACYMVGGDEEAWAVAEPLFRDTAVQDGYLFAGKPGSGHFLKMVHNGIEYGM 180 GGMEGARNGACYM+GGD+EAW + EP+FRDTAV++G+L+AGK GSGHFLKMVHNGIEYGM Sbjct: 121 GGMEGARNGACYMIGGDQEAWDIVEPIFRDTAVENGFLYAGKAGSGHFLKMVHNGIEYGM 180 Query: 181 MAAIGEGFEVLEKSGFDYNFEQVARVWNNGSVIRSWLMELVERAFSKDAKLDEIKGVMHS 240 MAAIGEGFE+LEKS FDY++E+V+RVWNNGSVIRSWLMEL E AFSKDAKLDEIKGVMHS Sbjct: 181 MAAIGEGFEILEKSEFDYDYEKVSRVWNNGSVIRSWLMELTENAFSKDAKLDEIKGVMHS 240 Query: 241 SGEGRWTLETAFDLQAATPVIAMALLMRYRSLETDTFTGKVVAALRNEFGGHAVETK 297 SGEG+WT+ETA DLQ ATPVIAM+LLMRYRSL+ DTFTGKVVAALRNEFGGHAVE K Sbjct: 241 SGEGKWTVETALDLQTATPVIAMSLLMRYRSLDNDTFTGKVVAALRNEFGGHAVEKK 297 >C2RQP6.1 C2RQP6_BACCE Putative uncharacterized protein Length = 297 Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust. Identities = 232/297 (78%), Positives = 265/297 (89%) Query: 1 MKVGLIGLGKMGANLGRNLLDHGHEVVAFDVNREAVSELESKGAAGADSLAGLVSKLGVP 60 M+VGLIGLGKMG NLG+NL+DH HEVVAFD+N AV E++ GA G SL+ LV L P Sbjct: 1 MQVGLIGLGKMGLNLGKNLMDHKHEVVAFDLNTSAVEEMKEYGATGTSSLSELVQSLQSP 60 Query: 61 RIAWIMVPHAFVDSVIEELAPLLSKGDIIIEAGNSQYKESIRRHGELAQQGIYFLDAGTS 120 RI W+MVPHA VDSVI+E+ PLLSKGDI+IEAGNS YKESIRR+ +L + GI+F+DAGTS Sbjct: 61 RILWVMVPHAVVDSVIDEVTPLLSKGDILIEAGNSHYKESIRRYEQLKEDGIHFMDAGTS 120 Query: 121 GGMEGARNGACYMVGGDEEAWAVAEPLFRDTAVQDGYLFAGKPGSGHFLKMVHNGIEYGM 180 GGMEGARNGACYM+GGD+EAW + EP+FRDTAV++G+L+AGK GSGHFLKMVHNGIEYGM Sbjct: 121 GGMEGARNGACYMIGGDQEAWDIVEPIFRDTAVENGFLYAGKAGSGHFLKMVHNGIEYGM 180 Query: 181 MAAIGEGFEVLEKSGFDYNFEQVARVWNNGSVIRSWLMELVERAFSKDAKLDEIKGVMHS 240 MAAIGEGFE+LEKS FDY++E+V+RVWNNGSVIRSWLMEL E AFSKDAKLDEIKGVMHS Sbjct: 181 MAAIGEGFEILEKSEFDYDYEKVSRVWNNGSVIRSWLMELTENAFSKDAKLDEIKGVMHS 240 Query: 241 SGEGRWTLETAFDLQAATPVIAMALLMRYRSLETDTFTGKVVAALRNEFGGHAVETK 297 SGEG+WT+ETA DLQ ATPVIAM+LLMRYRSL+ DTFTGKVVAALRNEFGGHAVE K Sbjct: 241 SGEGKWTVETALDLQTATPVIAMSLLMRYRSLDNDTFTGKVVAALRNEFGGHAVEKK 297 >C2U024.1 C2U024_BACCE Putative uncharacterized protein Length = 297 Score = 496 bits (1277), Expect = e-138, Method: Compositional matrix adjust. Identities = 232/297 (78%), Positives = 265/297 (89%) Query: 1 MKVGLIGLGKMGANLGRNLLDHGHEVVAFDVNREAVSELESKGAAGADSLAGLVSKLGVP 60 M+VGLIGLGKMG NLG+NL+DH HEVVAFD+N AV E++ GA G SL+ LV L P Sbjct: 1 MRVGLIGLGKMGLNLGKNLMDHKHEVVAFDLNTSAVEEMKEYGATGVSSLSDLVQSLQSP 60 Query: 61 RIAWIMVPHAFVDSVIEELAPLLSKGDIIIEAGNSQYKESIRRHGELAQQGIYFLDAGTS 120 RI W+MVPHA VDSVI+E+ PLLSKGDI+IEAGNS YKESIRR+ +L + GI+F+DAGTS Sbjct: 61 RILWVMVPHAVVDSVIDEVTPLLSKGDILIEAGNSHYKESIRRYEQLKKDGIHFMDAGTS 120 Query: 121 GGMEGARNGACYMVGGDEEAWAVAEPLFRDTAVQDGYLFAGKPGSGHFLKMVHNGIEYGM 180 GGMEGARNGACYM+GGD+EAW + EP+FRDTAV++G+L+AGK GSGHFLKMVHNGIEYGM Sbjct: 121 GGMEGARNGACYMIGGDQEAWDIVEPIFRDTAVENGFLYAGKAGSGHFLKMVHNGIEYGM 180 Query: 181 MAAIGEGFEVLEKSGFDYNFEQVARVWNNGSVIRSWLMELVERAFSKDAKLDEIKGVMHS 240 MAAIGEGFE+LEKS FDY++E+V+RVWNNGSVIRSWLMEL E AFSKDAKLDEIKGVMHS Sbjct: 181 MAAIGEGFEILEKSEFDYDYEKVSRVWNNGSVIRSWLMELTENAFSKDAKLDEIKGVMHS 240 Query: 241 SGEGRWTLETAFDLQAATPVIAMALLMRYRSLETDTFTGKVVAALRNEFGGHAVETK 297 SGEG+WT+ETA DLQ ATPVIAM+LLMRYRSL+ DTFTGKVVAALRNEFGGHAVE K Sbjct: 241 SGEGKWTVETALDLQTATPVIAMSLLMRYRSLDNDTFTGKVVAALRNEFGGHAVEKK 297 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,844,754,671 Number of extensions: 78193772 Number of successful extensions: 240163 Number of sequences better than 1.0e-05: 3690 Number of HSP's gapped: 233726 Number of HSP's successfully gapped: 3694 Length of query: 298 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 163 Effective length of database: 1,788,859,178 Effective search space: 291584046014 Effective search space used: 291584046014 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)