BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0504.0027.p
         (121 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A7GF68.1 A7GF68_CLOBL Putative uncharacterized protein                112   1e-23
B1IG45.1 B1IG45_CLOBK Putative uncharacterized protein                111   3e-23
A7FVH2.1 A7FVH2_CLOB1 Putative uncharacterized protein                109   7e-23
A5I3Q3.1 A5I3Q3_CLOBH Putative uncharacterized protein                109   7e-23
A6LZG7.1 A6LZG7_CLOB8 Putative uncharacterized protein                109   7e-23

>A7GF68.1 A7GF68_CLOBL Putative uncharacterized protein
          Length = 120

 Score =  112 bits (280), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 73/117 (62%)

Query: 3   MKIESIQKEGQAYVLCRPDDQPLRTEQDVLDLISGCFEHNSYKLLLQEGTLSDEFYNLRT 62
           M    ++K  + Y+ C   D+ L +E+DVLD I  C E++ YKL+L     S++F+NL+T
Sbjct: 1   MNYRVVKKNNKKYIECISVDKQLSSERDVLDFIGICVENDIYKLVLHGDVFSEDFFNLKT 60

Query: 63  GLAGTTLQKLINYHVKAAAVIHTEEATQGRFKELLTELNKGEDFRVFGSETEALDWL 119
           GLAG  LQK INYHVK A ++  EE    RF+E++ E NKG  FR F +  +A  W+
Sbjct: 61  GLAGMVLQKFINYHVKVAVILENEEKFNDRFREMIMESNKGNHFRTFKNIGDAEIWI 117


>B1IG45.1 B1IG45_CLOBK Putative uncharacterized protein
          Length = 120

 Score =  111 bits (277), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 73/117 (62%)

Query: 3   MKIESIQKEGQAYVLCRPDDQPLRTEQDVLDLISGCFEHNSYKLLLQEGTLSDEFYNLRT 62
           M    ++K  + Y+ C   D+ L +E+DVLD I  C E++ YKL+L     S++F+NL+T
Sbjct: 1   MNYRVVKKNNKKYIECISVDKQLSSERDVLDFIGICVENDIYKLVLHGDVFSEDFFNLKT 60

Query: 63  GLAGTTLQKLINYHVKAAAVIHTEEATQGRFKELLTELNKGEDFRVFGSETEALDWL 119
           GLAG  LQK INYHVK A ++  EE    RF+E++ + NKG  FR F +  +A  W+
Sbjct: 61  GLAGMVLQKFINYHVKVAVILENEEKFNDRFREMIMKSNKGNHFRTFKNIGDAEIWI 117


>A7FVH2.1 A7FVH2_CLOB1 Putative uncharacterized protein
          Length = 120

 Score =  109 bits (273), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 72/117 (61%)

Query: 3   MKIESIQKEGQAYVLCRPDDQPLRTEQDVLDLISGCFEHNSYKLLLQEGTLSDEFYNLRT 62
           M    ++K  + Y+ C   ++ L +E+DVLD I  CFE++   L+L E   S+ F+NL+T
Sbjct: 1   MNYRVVRKNNKKYIECISVEKQLSSERDVLDFIGICFENDICTLVLHEDIFSENFFNLKT 60

Query: 63  GLAGTTLQKLINYHVKAAAVIHTEEATQGRFKELLTELNKGEDFRVFGSETEALDWL 119
           GLAG  LQK INYH+K A ++  EE    RFKE++ E NKG  FR F +  +A  W+
Sbjct: 61  GLAGMVLQKFINYHIKVAVILENEEKFNDRFKEMIMESNKGNHFRTFKNIGDAEIWI 117


>A5I3Q3.1 A5I3Q3_CLOBH Putative uncharacterized protein
          Length = 120

 Score =  109 bits (273), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 72/117 (61%)

Query: 3   MKIESIQKEGQAYVLCRPDDQPLRTEQDVLDLISGCFEHNSYKLLLQEGTLSDEFYNLRT 62
           M    ++K  + Y+ C   ++ L +E+DVLD I  CFE++   L+L E   S+ F+NL+T
Sbjct: 1   MNYRVVRKNNKKYIECISVEKQLSSERDVLDFIGICFENDICTLVLHEDIFSENFFNLKT 60

Query: 63  GLAGTTLQKLINYHVKAAAVIHTEEATQGRFKELLTELNKGEDFRVFGSETEALDWL 119
           GLAG  LQK INYH+K A ++  EE    RFKE++ E NKG  FR F +  +A  W+
Sbjct: 61  GLAGMVLQKFINYHIKVAVILENEEKFNDRFKEMIMESNKGNHFRTFKNIGDAEIWI 117


>A6LZG7.1 A6LZG7_CLOB8 Putative uncharacterized protein
          Length = 120

 Score =  109 bits (273), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 49/117 (41%), Positives = 69/117 (58%)

Query: 3   MKIESIQKEGQAYVLCRPDDQPLRTEQDVLDLISGCFEHNSYKLLLQEGTLSDEFYNLRT 62
           M  + + K    Y+    +   L +EQDV+D IS C E++ Y ++     LS++F+NL+T
Sbjct: 1   MNYKVVNKNNVKYIEFASEVWKLSSEQDVVDCISICMENDVYTIMFHSNVLSEDFFNLKT 60

Query: 63  GLAGTTLQKLINYHVKAAAVIHTEEATQGRFKELLTELNKGEDFRVFGSETEALDWL 119
            +AG  LQK INYHVK A +I  EE    RFKE++ E NKG +FR F    EA  W+
Sbjct: 61  RIAGMALQKFINYHVKVAVIIENEEKLNDRFKEMIMESNKGNNFRTFKDTAEAESWI 117


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.136    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 686,174,826
Number of extensions: 24696771
Number of successful extensions: 58605
Number of sequences better than 1.0e-05: 101
Number of HSP's gapped: 58607
Number of HSP's successfully gapped: 101
Length of query: 121
Length of database: 3,060,696,203
Length adjustment: 87
Effective length of query: 34
Effective length of database: 2,241,067,898
Effective search space: 76196308532
Effective search space used: 76196308532
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 126 (53.1 bits)