BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0504.0024.p (659 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B6C867.1 B6C867_9BACL Beta-xylosidase EC=3.2.1.37 935 0.0 P45702.1 XYLA1_BACST Beta-xylosidase EC=3.2.1.37 927 0.0 Q09LZ0.1 Q09LZ0_BACST Beta-xylosidase 924 0.0 C3J6V8.1 C3J6V8_9BACI Xylan 1,4-beta-xylosidase EC=3.2.1.37 923 0.0 B7YF99.1 B7YF99_9BACI Xylan 1,4-beta-xylosidase EC=3.2.1.37 923 0.0 >B6C867.1 B6C867_9BACL Beta-xylosidase EC=3.2.1.37 Length = 701 Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust. Identities = 440/610 (72%), Positives = 507/610 (83%), Gaps = 2/610 (0%) Query: 1 LPFHEQGGDDESKRYDIENPDPNPDKPRILHPFADEEITRNFSLSVDSWSAGDLTFRIYS 60 LPF+E +DESKRYDIENPDPNPDKPR+LH + ++ R+F L D+W+AGDLTF+IY+ Sbjct: 58 LPFYESQEEDESKRYDIENPDPNPDKPRLLHAWPKSQVKRDFRLGTDAWTAGDLTFKIYT 117 Query: 61 PVRAVPDPETASEEELKQILLPALLVELEVDNTASPSARRAFFGFQGNDPYSAMRRLDDM 120 VR+VPDP+TA EEEL++ L+PA+L EL VDNT S RRAFFGF+G DPYSAMRRLDD Sbjct: 118 QVRSVPDPKTADEEELREALVPAVLAELIVDNTRSSRKRRAFFGFRGADPYSAMRRLDDT 177 Query: 121 QSGLTGVGQGRFLAIAAEQGTGVKSALHFTMEDILLAELEENWTFGLGHVGAQVIEVPPG 180 S L GVGQGR +AIA + V+SALHF+MEDIL +L ENWTFGLG VGA + + PG Sbjct: 178 SS-LAGVGQGRSIAIATDDKR-VRSALHFSMEDILTEKLTENWTFGLGTVGALIADAEPG 235 Query: 181 VKQCYRFAVCFHRSGFVTTGMDASYYYNRYFSNVESVAEYALAHFAEIKQQAVQANAMLE 240 K YRF +CF+R G VT G+D SYYY RYF N+E+VAEYA F +K A +AN +LE Sbjct: 236 EKAVYRFVICFYRGGIVTAGLDTSYYYTRYFRNIEAVAEYAAERFDALKASAERANGLLE 295 Query: 241 DSGLSEDQTFMLAHAIRSYYGSTQLLDYNQKPFWIVNEGEYRMMNTFDLTVDQLFYELRM 300 + LSEDQ FM+AHAIRSYYGSTQLL+ + +PFW+VNEGEYRMMNTFDLTVDQLF+EL+ Sbjct: 296 NGRLSEDQKFMMAHAIRSYYGSTQLLELDGEPFWVVNEGEYRMMNTFDLTVDQLFFELKF 355 Query: 301 NPWTVRNELDMFVERYSYTDTVRFPGDETDYPGGISFTHDMGVANAVSRAGYSAYEMYGI 360 NPWTVRNELDMFV+RYSYTDTVRFPGDET+YPGGISFTHDMGVAN +SR GYSAYE YG+ Sbjct: 356 NPWTVRNELDMFVKRYSYTDTVRFPGDETEYPGGISFTHDMGVANVLSRPGYSAYERYGL 415 Query: 361 DGCFSHMTHEQLVNWVLSSAVYLEHTGDRSWMERNLGVLEDCLTSMVNRDHPEPGQRNGV 420 DGCFSHMTHEQLVNWVL +A Y+E TGDR+W+E NL VLE CL SM+NRDHP+P QRNGV Sbjct: 416 DGCFSHMTHEQLVNWVLCAAAYVERTGDRAWLEANLTVLESCLESMLNRDHPDPAQRNGV 475 Query: 421 MGLDSSRTMGGAEITTYDSLDVSLGQARNNIYLAGKCWAAYLAMEKIFREAGKPELSATA 480 MGLDSSRTMGGAEITTYDSLDVSLGQARNNIYL GK WAAY+AMEK+F+E G EL+ A Sbjct: 476 MGLDSSRTMGGAEITTYDSLDVSLGQARNNIYLTGKTWAAYVAMEKLFKETGCGELAEVA 535 Query: 481 GDQAERCAATIVVSVTEDGYIPAVIGEGNDSKIIPAIEGLVFPYFTGCREALERDGRFAG 540 G QA+RCA TIV V EDG IPAVIGEGN+SKIIPAIEGL+FPY TGCREAL+ DGRF Sbjct: 536 GLQAQRCADTIVSHVQEDGTIPAVIGEGNNSKIIPAIEGLIFPYVTGCREALDADGRFGA 595 Query: 541 YMAALERHLQAVLVKGVCLFEDGGWKISSTSNNSWLSKIYLSQFIARQILGLEWTESGSE 600 Y+ AL+RH + VL +GVCLF DGGWKISSTS+NSWLSKIYL QFIAR+ILGL W E G+ Sbjct: 596 YIRALDRHFREVLREGVCLFPDGGWKISSTSDNSWLSKIYLCQFIARRILGLPWDEKGAR 655 Query: 601 ADRAHVEWLT 610 AD AHV+WLT Sbjct: 656 ADAAHVKWLT 665 >P45702.1 XYLA1_BACST Beta-xylosidase EC=3.2.1.37 Length = 705 Score = 927 bits (2395), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/610 (70%), Positives = 506/610 (82%), Gaps = 1/610 (0%) Query: 1 LPFHEQGGDDESKRYDIENPDPNPDKPRILHPFADEEITRNFSLSVDSWSAGDLTFRIYS 60 LPF E +DESKRYDIENPDPNP KP IL PFA EEI R F ++ D+W AGDLTF IYS Sbjct: 59 LPFLETAEEDESKRYDIENPDPNPQKPNILIPFAKEEIQREFHVATDTWKAGDLTFTIYS 118 Query: 61 PVRAVPDPETASEEELKQILLPALLVELEVDNTASPSARRAFFGFQGNDPYSAMRRLDDM 120 PV+AVP+PETA EEELK L+PA++VE+ +DNT ARRAFFGF+G DPY++MRR+DD Sbjct: 119 PVKAVPNPETADEEELKLALVPAVIVEMTIDNTNGTRARRAFFGFEGTDPYTSMRRIDDT 178 Query: 121 QSGLTGVGQGRFLAIAAEQGTGVKSALHFTMEDILLAELEENWTFGLGHVGAQVIEVPPG 180 L GVGQGR L+I ++ GV+SALHF+MEDIL A+LEENWTFGLG VGA +++VP G Sbjct: 179 CPQLRGVGQGRILSIVSKD-EGVRSALHFSMEDILTAQLEENWTFGLGKVGALIVDVPAG 237 Query: 181 VKQCYRFAVCFHRSGFVTTGMDASYYYNRYFSNVESVAEYALAHFAEIKQQAVQANAMLE 240 K+ Y+FAVCF+R G+VT GMDASY+Y R+F N+E V YAL +K+Q+ ++N ++E Sbjct: 238 EKKTYQFAVCFYRGGYVTAGMDASYFYTRFFQNIEEVGLYALEQAEVLKEQSFRSNKLIE 297 Query: 241 DSGLSEDQTFMLAHAIRSYYGSTQLLDYNQKPFWIVNEGEYRMMNTFDLTVDQLFYELRM 300 LS+DQTFM+AHAIRSYYG+TQLL++ KP W+VNEGEYRMMNTFDLTVDQLF+EL++ Sbjct: 298 KEWLSDDQTFMMAHAIRSYYGNTQLLEHEGKPIWVVNEGEYRMMNTFDLTVDQLFFELKL 357 Query: 301 NPWTVRNELDMFVERYSYTDTVRFPGDETDYPGGISFTHDMGVANAVSRAGYSAYEMYGI 360 NPWTV+N LD++VERYSY D VRFPG+ET+YP GISFTHDMGVAN SR YS+YE+YGI Sbjct: 358 NPWTVKNVLDLYVERYSYEDRVRFPGEETEYPSGISFTHDMGVANTFSRPHYSSYELYGI 417 Query: 361 DGCFSHMTHEQLVNWVLSSAVYLEHTGDRSWMERNLGVLEDCLTSMVNRDHPEPGQRNGV 420 GCFSHMTHEQLVNWVL +AVY+E T D +W ++ L +LE CL SMV RDHP+P QRNGV Sbjct: 418 SGCFSHMTHEQLVNWVLCAAVYIEQTKDWAWRDKRLAILEQCLESMVRRDHPDPEQRNGV 477 Query: 421 MGLDSSRTMGGAEITTYDSLDVSLGQARNNIYLAGKCWAAYLAMEKIFREAGKPELSATA 480 MGLDS+RTMGGAEITTYDSLDVSLGQARNN+YLAGKCWAAY+A+EK+FR+ GK EL+A A Sbjct: 478 MGLDSTRTMGGAEITTYDSLDVSLGQARNNLYLAGKCWAAYVALEKLFRDVGKEELAALA 537 Query: 481 GDQAERCAATIVVSVTEDGYIPAVIGEGNDSKIIPAIEGLVFPYFTGCREALERDGRFAG 540 G+QAE+CAATIV VT+DGYIPA++GEGNDSKIIPAIEGLVFPYFT C EAL+ +GRF Sbjct: 538 GEQAEKCAATIVSHVTDDGYIPAIMGEGNDSKIIPAIEGLVFPYFTNCHEALDENGRFGA 597 Query: 541 YMAALERHLQAVLVKGVCLFEDGGWKISSTSNNSWLSKIYLSQFIARQILGLEWTESGSE 600 Y+ AL HLQ VL +G+CLF DGGWKISSTSNNSWLSKIYL QFIAR ILG EW E G Sbjct: 598 YIQALRNHLQYVLREGICLFPDGGWKISSTSNNSWLSKIYLCQFIARHILGWEWDEQGKR 657 Query: 601 ADRAHVEWLT 610 AD AHV WLT Sbjct: 658 ADAAHVAWLT 667 >Q09LZ0.1 Q09LZ0_BACST Beta-xylosidase Length = 705 Score = 924 bits (2389), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/610 (71%), Positives = 501/610 (82%), Gaps = 1/610 (0%) Query: 1 LPFHEQGGDDESKRYDIENPDPNPDKPRILHPFADEEITRNFSLSVDSWSAGDLTFRIYS 60 LPF E G+DESKRYDIENPDPNP KP IL PFA E I R F ++ D+W AGDLT IYS Sbjct: 59 LPFAETAGEDESKRYDIENPDPNPQKPNILIPFAKERIEREFRVATDTWKAGDLTLTIYS 118 Query: 61 PVRAVPDPETASEEELKQILLPALLVELEVDNTASPSARRAFFGFQGNDPYSAMRRLDDM 120 PV+AVPDPETASEEELK L+PA++VE+ +DNT RRAFFGF+G DPY++MRR+DD Sbjct: 119 PVKAVPDPETASEEELKLALVPAVIVEMTIDNTNGTRTRRAFFGFEGTDPYTSMRRIDDT 178 Query: 121 QSGLTGVGQGRFLAIAAEQGTGVKSALHFTMEDILLAELEENWTFGLGHVGAQVIEVPPG 180 L GVGQGR L IA++ GV+SALHF+MEDIL A LEENWTFGLG VGA + +VP G Sbjct: 179 CPQLRGVGQGRILGIASKD-EGVRSALHFSMEDILTATLEENWTFGLGKVGALIADVPAG 237 Query: 181 VKQCYRFAVCFHRSGFVTTGMDASYYYNRYFSNVESVAEYALAHFAEIKQQAVQANAMLE 240 K+ Y+FAVCF+R G VT GMDASY+Y R+F N+E V YAL +K+QA ++N ++E Sbjct: 238 EKKTYQFAVCFYRGGCVTAGMDASYFYTRFFHNIEEVGLYALEQAEVLKEQAFRSNELIE 297 Query: 241 DSGLSEDQTFMLAHAIRSYYGSTQLLDYNQKPFWIVNEGEYRMMNTFDLTVDQLFYELRM 300 LS+DQ FM+AHAIRSYYG+TQLL++ KP W+VNEGEYRMMNTFDLTVDQLF+EL+M Sbjct: 298 KEWLSDDQKFMMAHAIRSYYGNTQLLEHEGKPIWVVNEGEYRMMNTFDLTVDQLFFELKM 357 Query: 301 NPWTVRNELDMFVERYSYTDTVRFPGDETDYPGGISFTHDMGVANAVSRAGYSAYEMYGI 360 NPWTV+N LD +VERYSY D VRFPGDET+YPGGISFTHDMGVAN SR YS+YE+YGI Sbjct: 358 NPWTVKNVLDFYVERYSYEDRVRFPGDETEYPGGISFTHDMGVANTFSRPHYSSYELYGI 417 Query: 361 DGCFSHMTHEQLVNWVLSSAVYLEHTGDRSWMERNLGVLEDCLTSMVNRDHPEPGQRNGV 420 GCFSHMTHEQLVNWVL +AVY+E T D +W +R L +LE CL SMV RDHP+P +RNGV Sbjct: 418 SGCFSHMTHEQLVNWVLCAAVYIEQTKDWAWRDRRLTILEQCLESMVRRDHPDPEKRNGV 477 Query: 421 MGLDSSRTMGGAEITTYDSLDVSLGQARNNIYLAGKCWAAYLAMEKIFREAGKPELSATA 480 MGLDS+RTMGGAEITTYDSLDVSLGQARNN+YLAGKCWAAY+A+EK+FR+ GK EL+A A Sbjct: 478 MGLDSTRTMGGAEITTYDSLDVSLGQARNNLYLAGKCWAAYVALEKLFRDVGKEELAALA 537 Query: 481 GDQAERCAATIVVSVTEDGYIPAVIGEGNDSKIIPAIEGLVFPYFTGCREALERDGRFAG 540 +QAE+CAATIV VTEDGYIPAV+GEGNDSKIIPAIEGLVFPYFT C EAL DGRF Sbjct: 538 REQAEKCAATIVSHVTEDGYIPAVMGEGNDSKIIPAIEGLVFPYFTNCHEALREDGRFGD 597 Query: 541 YMAALERHLQAVLVKGVCLFEDGGWKISSTSNNSWLSKIYLSQFIARQILGLEWTESGSE 600 Y+ AL +HLQ VL +G+CLF DGGWKISSTSNNSWLSKIYL QFIAR+ILG EW E G Sbjct: 598 YIRALRQHLQYVLREGICLFPDGGWKISSTSNNSWLSKIYLCQFIARRILGWEWDEQGKR 657 Query: 601 ADRAHVEWLT 610 AD AHV WLT Sbjct: 658 ADAAHVAWLT 667 >C3J6V8.1 C3J6V8_9BACI Xylan 1,4-beta-xylosidase EC=3.2.1.37 Length = 705 Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/610 (70%), Positives = 500/610 (81%), Gaps = 1/610 (0%) Query: 1 LPFHEQGGDDESKRYDIENPDPNPDKPRILHPFADEEITRNFSLSVDSWSAGDLTFRIYS 60 LPF E G+DESKRYDIENPDPNP KP IL PFA E I R F ++ D+W AGDLT IYS Sbjct: 59 LPFAETAGEDESKRYDIENPDPNPQKPNILIPFAKERIEREFRVATDTWKAGDLTLTIYS 118 Query: 61 PVRAVPDPETASEEELKQILLPALLVELEVDNTASPSARRAFFGFQGNDPYSAMRRLDDM 120 PV+AVPDPETASEEELK L+PA++VE+ +DNT RRAFFGF+G DPY++MRR+DD Sbjct: 119 PVKAVPDPETASEEELKLALVPAVIVEMTIDNTNGTRTRRAFFGFEGTDPYTSMRRIDDT 178 Query: 121 QSGLTGVGQGRFLAIAAEQGTGVKSALHFTMEDILLAELEENWTFGLGHVGAQVIEVPPG 180 L GVGQGR L+I ++ GV+SALHF+MEDIL A LEENWTFGLG VGA +++VP G Sbjct: 179 CPQLRGVGQGRILSIVSKD-EGVRSALHFSMEDILTATLEENWTFGLGKVGALIVDVPAG 237 Query: 181 VKQCYRFAVCFHRSGFVTTGMDASYYYNRYFSNVESVAEYALAHFAEIKQQAVQANAMLE 240 K+ Y+FAVCF+R G+VT GMDASY+Y R+F N+E V YAL +K+QA +N ++E Sbjct: 238 EKKTYQFAVCFYRGGYVTAGMDASYFYTRFFHNIEEVGLYALEQAEVLKEQAFCSNELIE 297 Query: 241 DSGLSEDQTFMLAHAIRSYYGSTQLLDYNQKPFWIVNEGEYRMMNTFDLTVDQLFYELRM 300 LS+DQ FM+AHAIRSYYG+TQLL++ KP W+VNEGEYRMMNTFDLTVDQLF+EL+M Sbjct: 298 KEWLSDDQKFMMAHAIRSYYGNTQLLEHEGKPIWVVNEGEYRMMNTFDLTVDQLFFELKM 357 Query: 301 NPWTVRNELDMFVERYSYTDTVRFPGDETDYPGGISFTHDMGVANAVSRAGYSAYEMYGI 360 NPWTV+N LD +VERYSY D VRFPGD T+YPGGISFTHDMGVAN SR YS+YE+YGI Sbjct: 358 NPWTVKNVLDFYVERYSYEDRVRFPGDGTEYPGGISFTHDMGVANTFSRPHYSSYELYGI 417 Query: 361 DGCFSHMTHEQLVNWVLSSAVYLEHTGDRSWMERNLGVLEDCLTSMVNRDHPEPGQRNGV 420 GCFSHMTHEQLVNWVL +AVY+E T D +W +R +LE CL SMV RDHP+P +RNGV Sbjct: 418 SGCFSHMTHEQLVNWVLCAAVYIEQTKDWAWRDRRFTILEQCLESMVRRDHPDPEKRNGV 477 Query: 421 MGLDSSRTMGGAEITTYDSLDVSLGQARNNIYLAGKCWAAYLAMEKIFREAGKPELSATA 480 MGLDS+RTMGGAEITTYDSLDVSLGQARNN+YLAGKCWAAY+A+EK+FR+ GK EL+ A Sbjct: 478 MGLDSTRTMGGAEITTYDSLDVSLGQARNNLYLAGKCWAAYVALEKLFRDVGKEELAVLA 537 Query: 481 GDQAERCAATIVVSVTEDGYIPAVIGEGNDSKIIPAIEGLVFPYFTGCREALERDGRFAG 540 G QAE+CAATIV VTEDGYIPAV+GEGNDSKIIPAIEGLVFPYFT C EAL+ DGRF Sbjct: 538 GKQAEKCAATIVSHVTEDGYIPAVMGEGNDSKIIPAIEGLVFPYFTNCHEALKEDGRFGD 597 Query: 541 YMAALERHLQAVLVKGVCLFEDGGWKISSTSNNSWLSKIYLSQFIARQILGLEWTESGSE 600 Y+ AL +HLQ VL +G+CLF DGGWKISSTSNNSWLSKIYL QFIAR+ILG EW E G Sbjct: 598 YIRALRQHLQYVLREGICLFPDGGWKISSTSNNSWLSKIYLCQFIARRILGWEWDEQGKR 657 Query: 601 ADRAHVEWLT 610 AD AHV WLT Sbjct: 658 ADAAHVAWLT 667 >B7YF99.1 B7YF99_9BACI Xylan 1,4-beta-xylosidase EC=3.2.1.37 Length = 705 Score = 923 bits (2385), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/610 (70%), Positives = 500/610 (81%), Gaps = 1/610 (0%) Query: 1 LPFHEQGGDDESKRYDIENPDPNPDKPRILHPFADEEITRNFSLSVDSWSAGDLTFRIYS 60 LPF E G+DESKRYDIENPDPNP KP IL PFA E I R F ++ D+W AGDLT IYS Sbjct: 59 LPFAETAGEDESKRYDIENPDPNPQKPNILIPFAKERIEREFRVATDTWKAGDLTLTIYS 118 Query: 61 PVRAVPDPETASEEELKQILLPALLVELEVDNTASPSARRAFFGFQGNDPYSAMRRLDDM 120 PV+AVPDPETASEEELK L+PA++VE+ +DNT RRAFFGF+G DPY++MRR+DD Sbjct: 119 PVKAVPDPETASEEELKLALVPAVIVEMTIDNTNGTRTRRAFFGFEGTDPYTSMRRIDDT 178 Query: 121 QSGLTGVGQGRFLAIAAEQGTGVKSALHFTMEDILLAELEENWTFGLGHVGAQVIEVPPG 180 L GVGQGR L+I ++ GV+SALHF+MEDIL A LEENWTFGLG VGA +++VP G Sbjct: 179 CPQLRGVGQGRILSIVSKD-EGVRSALHFSMEDILTATLEENWTFGLGKVGALIVDVPAG 237 Query: 181 VKQCYRFAVCFHRSGFVTTGMDASYYYNRYFSNVESVAEYALAHFAEIKQQAVQANAMLE 240 K+ Y+FAVCF+R G+VT GMDASY+Y R+F N+E V YAL +K+QA +N ++E Sbjct: 238 EKKTYQFAVCFYRGGYVTAGMDASYFYTRFFHNIEEVGLYALEQAEVLKEQAFCSNELIE 297 Query: 241 DSGLSEDQTFMLAHAIRSYYGSTQLLDYNQKPFWIVNEGEYRMMNTFDLTVDQLFYELRM 300 LS+DQ FM+AHAIRSYYG+TQLL++ KP W+VNEGEYRMMNTFDLTVDQLF+EL+M Sbjct: 298 KEWLSDDQKFMMAHAIRSYYGNTQLLEHEGKPIWVVNEGEYRMMNTFDLTVDQLFFELKM 357 Query: 301 NPWTVRNELDMFVERYSYTDTVRFPGDETDYPGGISFTHDMGVANAVSRAGYSAYEMYGI 360 NPWTV+N LD +VERYSY D VRFPGD T+YPGGISFTHDMGVAN SR YS+YE+YGI Sbjct: 358 NPWTVKNVLDFYVERYSYEDRVRFPGDGTEYPGGISFTHDMGVANTFSRPHYSSYELYGI 417 Query: 361 DGCFSHMTHEQLVNWVLSSAVYLEHTGDRSWMERNLGVLEDCLTSMVNRDHPEPGQRNGV 420 GCFSHMTHEQLVNWVL +AVY+E T D +W +R +LE CL SMV RDHP+P +RNGV Sbjct: 418 SGCFSHMTHEQLVNWVLCAAVYIEQTKDWAWRDRRFTILEQCLESMVRRDHPDPEKRNGV 477 Query: 421 MGLDSSRTMGGAEITTYDSLDVSLGQARNNIYLAGKCWAAYLAMEKIFREAGKPELSATA 480 MGLDS+RTMGGAEITTYDSLDVSLGQARNN+YLAGKCWAAY+A+EK+FR+ GK EL+ A Sbjct: 478 MGLDSTRTMGGAEITTYDSLDVSLGQARNNLYLAGKCWAAYVALEKLFRDVGKEELAVLA 537 Query: 481 GDQAERCAATIVVSVTEDGYIPAVIGEGNDSKIIPAIEGLVFPYFTGCREALERDGRFAG 540 G QAE+CAATIV VTEDGYIPAV+GEGNDSKIIPAIEGLVFPYFT C EAL+ DGRF Sbjct: 538 GKQAEKCAATIVSHVTEDGYIPAVMGEGNDSKIIPAIEGLVFPYFTNCHEALKEDGRFGD 597 Query: 541 YMAALERHLQAVLVKGVCLFEDGGWKISSTSNNSWLSKIYLSQFIARQILGLEWTESGSE 600 Y+ AL +HLQ VL +G+CLF DGGWKISSTSNNSWLSKIYL QFIAR+ILG EW E G Sbjct: 598 YIRALRQHLQYVLREGICLFPDGGWKISSTSNNSWLSKIYLCQFIARRILGWEWDEQGKR 657 Query: 601 ADRAHVEWLT 610 AD AHV WLT Sbjct: 658 ADAAHVAWLT 667 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.134 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,189,584,133 Number of extensions: 181208097 Number of successful extensions: 360718 Number of sequences better than 1.0e-05: 16 Number of HSP's gapped: 360674 Number of HSP's successfully gapped: 16 Length of query: 659 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 516 Effective length of database: 1,713,491,058 Effective search space: 884161385928 Effective search space used: 884161385928 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 135 (56.6 bits)