BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0502.0032.p
         (86 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KJE9.1 B3KJE9_9BACI Putative uncharacterized protein                145   1e-33
B1DHG9.1 B1DHG9_9BACL Putative uncharacterized protein                112   1e-23
B3K7X2.1 B3K7X2_9BACI Putative uncharacterized protein                 98   3e-19

>B3KJE9.1 B3KJE9_9BACI Putative uncharacterized protein
          Length = 112

 Score =  145 bits (365), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 66/86 (76%), Positives = 76/86 (88%)

Query: 1   MVHQVIPEAEERIQYKKPHFLKHGHYAAVISPSKDAIAFMIMNASGLTFPNGFEGPDERK 60
           M+H+ IPE EERIQYKKPHFLK+GHYAAVISPSKDAIAFMIMN + L  P+ F+GP ERK
Sbjct: 27  MIHEAIPEVEERIQYKKPHFLKNGHYAAVISPSKDAIAFMIMNTTNLEVPSTFDGPPERK 86

Query: 61  WLKIRKEDTPDYDLLANLLVQASSTL 86
           WLKIRK+DTPDY+ L+ LLVQASS+L
Sbjct: 87  WLKIRKDDTPDYEQLSELLVQASSSL 112


>B1DHG9.1 B1DHG9_9BACL Putative uncharacterized protein
          Length = 114

 Score =  112 bits (280), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 55/87 (63%), Positives = 67/87 (77%), Gaps = 1/87 (1%)

Query: 1   MVHQVIPEAEERIQYKKPHFLKHGHYAAVISPSKDAIAFMIMNASGLTFPNG-FEGPDER 59
           MVH+ +P AEERIQYKKPHFLK+G YAAVIS +KDA++F+I NA+ + FP G F+GP ER
Sbjct: 28  MVHETMPGAEERIQYKKPHFLKNGKYAAVISTAKDAVSFVIFNAAEVEFPEGQFDGPPER 87

Query: 60  KWLKIRKEDTPDYDLLANLLVQASSTL 86
           K +K +     DYDLLANLL QAS  L
Sbjct: 88  KTIKFKAGQAVDYDLLANLLKQASEPL 114


>B3K7X2.1 B3K7X2_9BACI Putative uncharacterized protein
          Length = 113

 Score = 97.8 bits (242), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/87 (57%), Positives = 60/87 (68%), Gaps = 1/87 (1%)

Query: 1   MVHQVIPEAEERIQYKKPHFLKHGHYAAVISPSKDAIAFMIMNASGLTFPNG-FEGPDER 59
           +VH  IP+  ER+QYKKPHFLK+G YAAVIS +K A++F I NA GL +P   FEGP ER
Sbjct: 27  LVHNTIPDVAERLQYKKPHFLKNGKYAAVISVAKSAVSFTIFNAEGLEWPETLFEGPPER 86

Query: 60  KWLKIRKEDTPDYDLLANLLVQASSTL 86
           K +KI      DY  LA+LL QAS  L
Sbjct: 87  KTIKISAGQQVDYAALASLLKQASVGL 113


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.319    0.135    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 552,003,561
Number of extensions: 19272108
Number of successful extensions: 35450
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 35448
Number of HSP's successfully gapped: 3
Length of query: 86
Length of database: 3,060,696,203
Length adjustment: 56
Effective length of query: 30
Effective length of database: 2,533,119,363
Effective search space: 75993580890
Effective search space used: 75993580890
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)