BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0502.0018.p (367 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KJM9.1 B3KJM9_9BACI Oxidoreductase domain protein 578 e-163 B1DF58.1 B1DF58_9BACL Oxidoreductase domain protein 432 e-119 Q9KEZ1.1 Q9KEZ1_BACHD BH0708 protein 426 e-117 A7NS75.1 A7NS75_ROSCS Oxidoreductase domain protein 423 e-116 A5UYV9.1 A5UYV9_ROSS1 Oxidoreductase domain protein 421 e-116 >B3KJM9.1 B3KJM9_9BACI Oxidoreductase domain protein Length = 368 Score = 578 bits (1489), Expect = e-163, Method: Compositional matrix adjust. Identities = 279/353 (79%), Positives = 305/353 (86%) Query: 15 SSIYMENCQKFAILDLSACADMDPARAAEQAAAYGIPNVYTVEQLLADPEIEIVINLTIP 74 S IYMENC KF IL+L+ACAD+D ARA EQAA Y IPNVYT E+LLADPEIE+VINLTIP Sbjct: 15 SGIYMENCHKFDILELTACADIDRARAEEQAAKYNIPNVYTTEELLADPEIELVINLTIP 74 Query: 75 AAHAEISLRALEAGKHVYVEKPLAVTREEGRKVLEAARANGLLVGSAPETFLGAGIQTAL 134 A HA+I L ALEAGKHVYVEKPL VTREEGR VL+ A A GLLVG APETFLGAGIQTAL Sbjct: 75 ALHAQIMLDALEAGKHVYVEKPLGVTREEGRAVLDMAAAKGLLVGCAPETFLGAGIQTAL 134 Query: 135 KMIEDGVIGKPVAATSFMMSRGHEFWHPDPEFYYAAGGGPMFDMGPYYLTALVQLLGPIR 194 K+IEDG IGKP+AAT+FMMSRGHE WHPDPEFYYAAGGGPMFDMGPYYLTALVQLLGPIR Sbjct: 135 KLIEDGRIGKPIAATAFMMSRGHEHWHPDPEFYYAAGGGPMFDMGPYYLTALVQLLGPIR 194 Query: 195 TVAGITGKALAERTITSEKKAGKKIPVDIPTHVAGTLQFSSGAIATLIMSFDVFGGSDLP 254 ++G+TG ALAERTITSEKK G+KI VDIPTHVAG + F +GAI TLI SFDVFGGS LP Sbjct: 195 GISGMTGAALAERTITSEKKQGQKIKVDIPTHVAGLIDFQNGAIGTLITSFDVFGGSTLP 254 Query: 255 PIEIYGTEGSLQVPDPNTFGGTVKYRRMGESEWREQPLLPGYDQNTRGIGPADMAYAIRT 314 IEIYGT+G+L VPDPNTFGG VKYR GE+EW E+PLLPGY++NTRGIGPADMAYAIR+ Sbjct: 255 NIEIYGTKGTLLVPDPNTFGGPVKYRLTGETEWTEEPLLPGYNENTRGIGPADMAYAIRS 314 Query: 315 GRPHRASGELAYHVLEAMWAFHDSSDSKHFYEMESSCGRPSPLPPGLAPYTLD 367 GR HRASGELAYHVLEAMW FHD+SD YEM S+C P+PLP L YTLD Sbjct: 315 GRAHRASGELAYHVLEAMWGFHDASDDGKRYEMSSTCDIPAPLPLDLPKYTLD 367 >B1DF58.1 B1DF58_9BACL Oxidoreductase domain protein Length = 366 Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust. Identities = 212/353 (60%), Positives = 262/353 (74%), Gaps = 1/353 (0%) Query: 15 SSIYMENCQKFAILDLSACADMDPARAAEQAAAYGIPNVYTVEQLLADPEIEIVINLTIP 74 SS Y+ N KF +++ ACAD+D RA +A +GI +VE+LLADPEI +VINLTIP Sbjct: 15 SSAYLNNGTKFDSMEIVACADLDVDRAKAKAEEFGIRGC-SVEELLADPEIGMVINLTIP 73 Query: 75 AAHAEISLRALEAGKHVYVEKPLAVTREEGRKVLEAARANGLLVGSAPETFLGAGIQTAL 134 AHA + L+ALEAGKHVYVEKP VTREE + VLE A GLLVGSAP+TFLGAGIQT++ Sbjct: 74 QAHAAVCLQALEAGKHVYVEKPFTVTREEAQAVLELAARKGLLVGSAPDTFLGAGIQTSI 133 Query: 135 KMIEDGVIGKPVAATSFMMSRGHEFWHPDPEFYYAAGGGPMFDMGPYYLTALVQLLGPIR 194 K+IEDG IG P+ AT+FMMS GHE WHP PEFYY GGGPMFDMGPYYLTA+V +LGPI Sbjct: 134 KLIEDGWIGTPIGATAFMMSGGHEMWHPAPEFYYQKGGGPMFDMGPYYLTAMVAMLGPIS 193 Query: 195 TVAGITGKALAERTITSEKKAGKKIPVDIPTHVAGTLQFSSGAIATLIMSFDVFGGSDLP 254 V G+ + ERTITS+ K G+KI V++PTHVAG ++F+SG I T++ +FDV GGS LP Sbjct: 194 RVTGMARASFPERTITSQPKFGQKIQVEVPTHVAGIIEFASGPIGTILQTFDVRGGSTLP 253 Query: 255 PIEIYGTEGSLQVPDPNTFGGTVKYRRMGESEWREQPLLPGYDQNTRGIGPADMAYAIRT 314 IE+YG+ G+L VPDPNTFGG ++++R G EW E PL+ N RG+G AD+A A T Sbjct: 254 RIEVYGSAGTLLVPDPNTFGGPIQFKRAGSHEWSEIPLVYPNTDNVRGLGAADLAKAALT 313 Query: 315 GRPHRASGELAYHVLEAMWAFHDSSDSKHFYEMESSCGRPSPLPPGLAPYTLD 367 GR R SGELAYHVLEAM F D+++ Y M+SSC +P+P GL P +LD Sbjct: 314 GRKARPSGELAYHVLEAMHGFFDAAEQGAHYTMKSSCEKPAPFTLGLQPNSLD 366 >Q9KEZ1.1 Q9KEZ1_BACHD BH0708 protein Length = 369 Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust. Identities = 205/344 (59%), Positives = 252/344 (73%) Query: 15 SSIYMENCQKFAILDLSACADMDPARAAEQAAAYGIPNVYTVEQLLADPEIEIVINLTIP 74 SSIY EN +F L + ACAD+ RA QA Y IP TV +LL DPEIE+VINLTIP Sbjct: 15 SSIYFENVHRFKHLTIVACADLHLERARAQAEKYRIPKACTVAELLEDPEIELVINLTIP 74 Query: 75 AAHAEISLRALEAGKHVYVEKPLAVTREEGRKVLEAARANGLLVGSAPETFLGAGIQTAL 134 HA++ ++ALEAGKHVY EKPL +T EEG+K+LE A+ GLLVG AP+TFLGAGIQT++ Sbjct: 75 QVHAKVCIQALEAGKHVYTEKPLTITLEEGQKLLEKAKETGLLVGCAPDTFLGAGIQTSI 134 Query: 135 KMIEDGVIGKPVAATSFMMSRGHEFWHPDPEFYYAAGGGPMFDMGPYYLTALVQLLGPIR 194 ++IE G IG PV A++FM+ RGHE WHPDP FYY GGGPM+DMGPYYLTAL LLGP+ Sbjct: 135 QVIERGEIGTPVGASAFMIGRGHEHWHPDPAFYYDVGGGPMYDMGPYYLTALTALLGPMA 194 Query: 195 TVAGITGKALAERTITSEKKAGKKIPVDIPTHVAGTLQFSSGAIATLIMSFDVFGGSDLP 254 V+G ERTI SE K G KI V PTH++G + F++GAIA++ SFD FGGS LP Sbjct: 195 RVSGSARITYPERTILSEPKKGTKIKVSTPTHISGVIDFANGAIASITTSFDAFGGSVLP 254 Query: 255 PIEIYGTEGSLQVPDPNTFGGTVKYRRMGESEWREQPLLPGYDQNTRGIGPADMAYAIRT 314 PIE+YG+EG+L VPDPNTF G V+ R+ E E+ E PL Y +N RGIG ADMA ++ T Sbjct: 255 PIEVYGSEGTLLVPDPNTFDGPVQLRKRDEREFVEVPLTYHYTENNRGIGVADMAMSLLT 314 Query: 315 GRPHRASGELAYHVLEAMWAFHDSSDSKHFYEMESSCGRPSPLP 358 G +RASG + +HVLEAM FH SS S H Y+M+S+C +P PLP Sbjct: 315 GSDYRASGTMGFHVLEAMHGFHMSSTSGHHYQMKSTCRKPEPLP 358 >A7NS75.1 A7NS75_ROSCS Oxidoreductase domain protein Length = 369 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 210/353 (59%), Positives = 254/353 (71%), Gaps = 1/353 (0%) Query: 15 SSIYMENCQKFAILDLSACADMDPARAAEQAAAYGIPNVYTVEQLLADPEIEIVINLTIP 74 S IY+EN + F L++ A AD+DP RA +AA Y +P +VE+LLADP+IEIVINLT P Sbjct: 16 SGIYLENSRMFDALNVVAVADIDPDRAQARAAEYNVPKACSVEELLADPDIEIVINLTTP 75 Query: 75 AAHAEISLRALEAGKHVYVEKPLAVTREEGRKVLEAARANGLLVGSAPETFLGAGIQTAL 134 AH ++L AL AGKHVY EKPLAVTR+E R +L+ A GL VG AP+TFLG G+QT Sbjct: 76 DAHGPVALAALNAGKHVYNEKPLAVTRDEARALLDLAERKGLRVGCAPDTFLGGGLQTCR 135 Query: 135 KMIEDGVIGKPVAATSFMMSRGHEFWHPDPEFYYAAGGGPMFDMGPYYLTALVQLLGPIR 194 K+I+DG IG+P+ AT+FMMS G E WHP+P F+Y GGGPMFDMGPYYLTAL LLGP+R Sbjct: 136 KLIDDGWIGEPIGATAFMMSHGPESWHPNPTFFYQPGGGPMFDMGPYYLTALCVLLGPVR 195 Query: 195 TVAGITGKALAERTITSEKKAGKKIPVDIPTHVAGTLQFSSGAIATLIMSFDVFGGSDLP 254 V G + AERT+T E+ G IPV+ PTHVAG L F+SGA+AT+I SFDV+ S LP Sbjct: 196 RVTGSARISFAERTVTGERNYGATIPVNTPTHVAGVLDFASGAVATIITSFDVW-SSQLP 254 Query: 255 PIEIYGTEGSLQVPDPNTFGGTVKYRRMGESEWREQPLLPGYDQNTRGIGPADMAYAIRT 314 IEIYG+ G+L VPDPNTF G V RR G EW PL G+ +N+RGIG ADMA AIRT Sbjct: 255 RIEIYGSHGTLSVPDPNTFDGPVLLRRAGAREWSSIPLSHGFTRNSRGIGVADMATAIRT 314 Query: 315 GRPHRASGELAYHVLEAMWAFHDSSDSKHFYEMESSCGRPSPLPPGLAPYTLD 367 RPHRASGELAYHVL+ M A HD+S + + S+ RP PLP GL +D Sbjct: 315 DRPHRASGELAYHVLDIMHAIHDASREERHILLRSAMTRPKPLPLGLGERGVD 367 >A5UYV9.1 A5UYV9_ROSS1 Oxidoreductase domain protein Length = 373 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 208/353 (58%), Positives = 255/353 (72%), Gaps = 1/353 (0%) Query: 15 SSIYMENCQKFAILDLSACADMDPARAAEQAAAYGIPNVYTVEQLLADPEIEIVINLTIP 74 S IY+EN + F +D+ A AD+DP RA ++A YGIP +VE+LLADP+I++V+NLT P Sbjct: 21 SGIYLENSKIFDAIDVVAVADIDPDRARDRATQYGIPKACSVEELLADPDIDLVVNLTTP 80 Query: 75 AAHAEISLRALEAGKHVYVEKPLAVTREEGRKVLEAARANGLLVGSAPETFLGAGIQTAL 134 AH ++L L AGKHVY EKPLAVTR+E R +L+ A GL VG AP+TFLG G+QT Sbjct: 81 DAHGPVALAVLNAGKHVYNEKPLAVTRDEARALLDLAAQKGLRVGCAPDTFLGGGLQTCR 140 Query: 135 KMIEDGVIGKPVAATSFMMSRGHEFWHPDPEFYYAAGGGPMFDMGPYYLTALVQLLGPIR 194 K+I+DG IG+P+ AT+FMMS G E WHP+P F+Y GGGPMFDMGPYYLTAL LLGP++ Sbjct: 141 KLIDDGWIGEPIGATAFMMSHGPESWHPNPTFFYQPGGGPMFDMGPYYLTALCVLLGPVQ 200 Query: 195 TVAGITGKALAERTITSEKKAGKKIPVDIPTHVAGTLQFSSGAIATLIMSFDVFGGSDLP 254 V G + ERTIT+E G KI V+ PTHVAGTL F+SGAIAT+I SFDV+ S LP Sbjct: 201 RVTGSARISFTERTITNEYNYGDKIQVNTPTHVAGTLDFASGAIATIITSFDVW-ASQLP 259 Query: 255 PIEIYGTEGSLQVPDPNTFGGTVKYRRMGESEWREQPLLPGYDQNTRGIGPADMAYAIRT 314 IEIYG+ G+L VPDPNTF G V RR G EW PL G+ +N+RGIG ADMA AIR Sbjct: 260 RIEIYGSHGTLSVPDPNTFDGPVWLRRAGAREWSSIPLSHGFTRNSRGIGVADMATAIRL 319 Query: 315 GRPHRASGELAYHVLEAMWAFHDSSDSKHFYEMESSCGRPSPLPPGLAPYTLD 367 GRPHRASGELAYHVL+ M A HD+S + S+ RP+PLP GL ++D Sbjct: 320 GRPHRASGELAYHVLDIMHAIHDASREGRHITLRSTMTRPAPLPTGLGERSVD 372 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.135 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,235,948,237 Number of extensions: 98199119 Number of successful extensions: 226891 Number of sequences better than 1.0e-05: 2418 Number of HSP's gapped: 225946 Number of HSP's successfully gapped: 2419 Length of query: 367 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 230 Effective length of database: 1,770,017,148 Effective search space: 407103944040 Effective search space used: 407103944040 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)