BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0500.0016.p (263 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6LTK0.1 A6LTK0_CLOB8 Putative uncharacterized protein 337 5e-91 C1RR55.1 C1RR55_9SPHI Putative uncharacterized protein 324 4e-87 C3J2K8.1 C3J2K8_9BACI Putative uncharacterized protein 317 8e-85 B7YBK6.1 B7YBK6_9BACI Putative uncharacterized protein 317 8e-85 Q5KVX2.1 Q5KVX2_GEOKA Hypothetical conserved protein 316 2e-84 >A6LTK0.1 A6LTK0_CLOB8 Putative uncharacterized protein Length = 265 Score = 337 bits (865), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 164/264 (62%), Positives = 204/264 (77%), Gaps = 3/264 (1%) Query: 1 LSAHEIDYVIMGEEIQCVEVQLDPGESVIAEAGSFMMMDPEISMETIFXXXXXXXXXXXX 60 + +HEIDY I G++IQ VE++LDP E+VIAEAG+ MMMDP I METIF Sbjct: 1 MYSHEIDYKIKGDDIQYVEIELDPTETVIAEAGAMMMMDPNIQMETIFGDGSKQSGSSFM 60 Query: 61 XXXXXXXXXXXTGESLFMTVFTHSGAYGRKSVTFAAPYPGKIIPLDLQQHGGKIICQKDS 120 TGESLFMT FT+SG ++ V FAAPYPGKIIP+DL GGK+ICQKD+ Sbjct: 61 NKIFSAGKRVLTGESLFMTAFTNSGTL-KEKVYFAAPYPGKIIPMDLSLLGGKLICQKDA 119 Query: 121 FLCAAKGVSIGIEFQRKLGAGFFGGEGFIMQKLEGDGLSFVHSGGYIMERTLQPGETIKL 180 FLCAAKGVS+GI+F++KL GFFGGEGFI++KLEGDGL+F+H+ G I+ER L PGET+K+ Sbjct: 120 FLCAAKGVSVGIDFRKKLSVGFFGGEGFILEKLEGDGLAFIHACGAIVERNLLPGETLKI 179 Query: 181 DTGCLVAMTSSVDYNIEFVKGVKTALFGGEGLFFATLRGPGKVWVQSLPFSRMADRILSA 240 DTGCLVAMT V Y+I+F+ G+K LFGGEG+FFAT+ GPGK+WVQSLPFSR+A+R+ +A Sbjct: 180 DTGCLVAMTKDVHYDIQFIGGIKNTLFGGEGVFFATVTGPGKIWVQSLPFSRLAERVFAA 239 Query: 241 AGNSG--RKEEGSILGGLGNLLDG 262 A SG +EEGS+LG LGN+LDG Sbjct: 240 APTSGGKNREEGSVLGMLGNILDG 263 >C1RR55.1 C1RR55_9SPHI Putative uncharacterized protein Length = 261 Score = 324 bits (831), Expect = 4e-87, Method: Compositional matrix adjust. Identities = 161/249 (64%), Positives = 195/249 (78%), Gaps = 3/249 (1%) Query: 4 HEIDYVIMGEEIQCVEVQLDPGESVIAEAGSFMMMDPEISMETIFXXXXXXXXXXXXXXX 63 HEIDY I GEEIQ VE++LDP E+ IAE+GSFMMMD +I M+T+F Sbjct: 5 HEIDYRIYGEEIQIVEIELDPQETAIAESGSFMMMDQDIQMQTMFGDGSQANQGIFGKLV 64 Query: 64 XXXXXXXXTGESLFMTVFTHSGAYGRKSVTFAAPYPGKIIPLDLQQHGGKIICQKDSFLC 123 TGESLFMT FT+ G G+K V+FAAPYPGKIIP+DLQ+ GGK+ICQKD+FLC Sbjct: 65 SAGKRML-TGESLFMTAFTNMGQ-GKKKVSFAAPYPGKIIPMDLQRMGGKVICQKDAFLC 122 Query: 124 AAKGVSIGIEFQRKLGAGFFGGEGFIMQKLEGDGLSFVHSGGYIMERTLQPGETIKLDTG 183 AAKGVSIGIE+QRKLG G FGGEGFIM+KLEGDG++FVH+GG ++ER L PG+ +K+DTG Sbjct: 123 AAKGVSIGIEWQRKLGTGIFGGEGFIMEKLEGDGMAFVHAGGMVIERDLLPGQVLKIDTG 182 Query: 184 CLVAMTSSVDYNIEFVKGVKTALFGGEGLFFATLRGPGKVWVQSLPFSRMADRILSAAGN 243 C+VA TS V +++EFVKG++ +FGGEGLFFATLRGPGKVW+QSLP SRMA R++S G Sbjct: 183 CVVAYTSGVHFDVEFVKGIRNMVFGGEGLFFATLRGPGKVWIQSLPISRMAARLVS-YGT 241 Query: 244 SGRKEEGSI 252 RKEEGSI Sbjct: 242 GKRKEEGSI 250 >C3J2K8.1 C3J2K8_9BACI Putative uncharacterized protein Length = 264 Score = 317 bits (812), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 172/264 (65%), Positives = 208/264 (78%), Gaps = 4/264 (1%) Query: 1 LSAHEIDYVIMGEEIQCVEVQLDPGESVIAEAGSFMMMDPEISMETIFXXXXXXXXXXXX 60 +SAHEIDY + G+++Q VE++LDP ESV+AEAG MMMD I MET+F Sbjct: 1 MSAHEIDYRLYGDDMQFVEIELDPYESVVAEAGGMMMMDDGIVMETVFGDGSSSGKGLLG 60 Query: 61 XXXXXXXXXXXTGESLFMTVFTHSGAYGRKSVTFAAPYPGKIIPLDLQQHGGKIICQKDS 120 TGESLFMTVFT+ G+ G++ V FAAPYPGKIIP+DL + GGK+ICQKDS Sbjct: 61 RLVGAGKRLL-TGESLFMTVFTNQGS-GKRRVAFAAPYPGKIIPVDLSELGGKLICQKDS 118 Query: 121 FLCAAKGVSIGIEFQRKLGAGFFGGEGFIMQKLEGDGLSFVHSGGYIMERTLQPGETIKL 180 FLCAAKGVS+GIEFQRKLGAGFFGGEGFIMQKLEGDGL+F+H+GG I R LQPGET+++ Sbjct: 119 FLCAAKGVSVGIEFQRKLGAGFFGGEGFIMQKLEGDGLAFLHAGGTIHRRDLQPGETLRI 178 Query: 181 DTGCLVAMTSSVDYNIEFVKGVKTALFGGEGLFFATLRGPGKVWVQSLPFSRMADRILSA 240 DTGCLVAMT V+Y+IE+V +KTA FGGEGLF AT+ GPG VWVQSLPFSR+ADR+L+A Sbjct: 179 DTGCLVAMTKDVNYDIEYVGNIKTAFFGGEGLFLATVTGPGAVWVQSLPFSRLADRVLAA 238 Query: 241 AGNSGRKE--EGSILGGLGNLLDG 262 A ++G + EGSILGG+G+ LDG Sbjct: 239 APSAGGRSVGEGSILGGIGDWLDG 262 >B7YBK6.1 B7YBK6_9BACI Putative uncharacterized protein Length = 264 Score = 317 bits (812), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 172/264 (65%), Positives = 208/264 (78%), Gaps = 4/264 (1%) Query: 1 LSAHEIDYVIMGEEIQCVEVQLDPGESVIAEAGSFMMMDPEISMETIFXXXXXXXXXXXX 60 +SAHEIDY + G+++Q VE++LDP ESV+AEAG MMMD I MET+F Sbjct: 1 MSAHEIDYRLYGDDMQFVEIELDPYESVVAEAGGMMMMDDGIVMETVFGDGSSSGKGLLG 60 Query: 61 XXXXXXXXXXXTGESLFMTVFTHSGAYGRKSVTFAAPYPGKIIPLDLQQHGGKIICQKDS 120 TGESLFMTVFT+ G+ G++ V FAAPYPGKIIP+DL + GGK+ICQKDS Sbjct: 61 RLVGAGKRLL-TGESLFMTVFTNQGS-GKRRVAFAAPYPGKIIPVDLSELGGKLICQKDS 118 Query: 121 FLCAAKGVSIGIEFQRKLGAGFFGGEGFIMQKLEGDGLSFVHSGGYIMERTLQPGETIKL 180 FLCAAKGVS+GIEFQRKLGAGFFGGEGFIMQKLEGDGL+F+H+GG I R LQPGET+++ Sbjct: 119 FLCAAKGVSVGIEFQRKLGAGFFGGEGFIMQKLEGDGLAFLHAGGTIHRRDLQPGETLRI 178 Query: 181 DTGCLVAMTSSVDYNIEFVKGVKTALFGGEGLFFATLRGPGKVWVQSLPFSRMADRILSA 240 DTGCLVAMT V+Y+IE+V +KTA FGGEGLF AT+ GPG VWVQSLPFSR+ADR+L+A Sbjct: 179 DTGCLVAMTKDVNYDIEYVGNIKTAFFGGEGLFLATVTGPGAVWVQSLPFSRLADRVLAA 238 Query: 241 AGNSGRKE--EGSILGGLGNLLDG 262 A ++G + EGSILGG+G+ LDG Sbjct: 239 APSAGGRSVGEGSILGGIGDWLDG 262 >Q5KVX2.1 Q5KVX2_GEOKA Hypothetical conserved protein Length = 264 Score = 316 bits (809), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 171/264 (64%), Positives = 208/264 (78%), Gaps = 4/264 (1%) Query: 1 LSAHEIDYVIMGEEIQCVEVQLDPGESVIAEAGSFMMMDPEISMETIFXXXXXXXXXXXX 60 ++AHEIDY + G+++Q VE++LDP ESV+AEAG MMMD I MET+F Sbjct: 1 MNAHEIDYRLYGDDMQFVEIELDPYESVVAEAGGMMMMDDGIVMETVFGDGSSSGKGLLG 60 Query: 61 XXXXXXXXXXXTGESLFMTVFTHSGAYGRKSVTFAAPYPGKIIPLDLQQHGGKIICQKDS 120 TGESLFMTVFT+ G+ G++ V FAAPYPGKIIP+DL + GGK+ICQKDS Sbjct: 61 RLVGAGKRLL-TGESLFMTVFTNQGS-GKRRVAFAAPYPGKIIPVDLSELGGKLICQKDS 118 Query: 121 FLCAAKGVSIGIEFQRKLGAGFFGGEGFIMQKLEGDGLSFVHSGGYIMERTLQPGETIKL 180 FLCAAKGVS+GIEFQRKLGAGFFGGEGFIMQKLEGDGL+F+H+GG I R LQPGET+++ Sbjct: 119 FLCAAKGVSVGIEFQRKLGAGFFGGEGFIMQKLEGDGLAFLHAGGTIHRRDLQPGETLRI 178 Query: 181 DTGCLVAMTSSVDYNIEFVKGVKTALFGGEGLFFATLRGPGKVWVQSLPFSRMADRILSA 240 DTGCLVAMT V+Y+IE+V +KTA FGGEGLF AT+ GPG VWVQSLPFSR+ADR+L+A Sbjct: 179 DTGCLVAMTKDVNYDIEYVGNIKTAFFGGEGLFLATVTGPGAVWVQSLPFSRLADRVLAA 238 Query: 241 AGNSGRKE--EGSILGGLGNLLDG 262 A ++G + EGSILGG+G+ LDG Sbjct: 239 APSAGGRSVGEGSILGGIGDWLDG 262 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.140 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,469,216,428 Number of extensions: 58577360 Number of successful extensions: 118014 Number of sequences better than 1.0e-05: 459 Number of HSP's gapped: 116374 Number of HSP's successfully gapped: 459 Length of query: 263 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 130 Effective length of database: 1,807,701,208 Effective search space: 235001157040 Effective search space used: 235001157040 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 130 (54.7 bits)