BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0500.0015.p (216 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KJC5.1 B3KJC5_9BACI Putative uncharacterized protein 206 9e-52 C0ZGK1.1 C0ZGK1_BREBN Conserved hypothetical membrane protein 189 1e-46 C4L102.1 C4L102_EXISA Putative uncharacterized protein 139 2e-31 B1YF60.1 B1YF60_EXIS2 Putative uncharacterized protein 136 1e-30 Q81KV4.1 Q81KV4_BACAN Putative uncharacterized protein 135 3e-30 >B3KJC5.1 B3KJC5_9BACI Putative uncharacterized protein Length = 230 Score = 206 bits (525), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 113/204 (55%), Positives = 146/204 (71%), Gaps = 1/204 (0%) Query: 7 LTIILSGTLLLAFTYYHINYQNHLTEGGFVGLSLLGKYVLGISPSLTILILDIPVLLIAM 66 ++ +L GT L+AFTYYHIN+ NHLTEGGFVGL+LLGKY L I P+L+++++DIPVLLIA+ Sbjct: 11 MSAMLFGTFLMAFTYYHINFHNHLTEGGFVGLALLGKYALDIPPALSMVLMDIPVLLIAL 70 Query: 67 IFKGRAFVLNTFISVGAFTVFYSLMERYSGWVINLQDNLPLAALLSGVLTXXXXXXXXXX 126 KGR F+ NT ++ FT+FY+L+ERYS VI+L NL AALLSG+LT Sbjct: 71 FIKGRKFIFNTVVAASMFTLFYALIERYSTLVIDLNHNLLAAALLSGLLTGFGAGIVLRY 130 Query: 127 XXXXXXDDILSLLISEWKGIKVGTVFILMDVIVLALSLFYMPLKETLYTVMAVVVAGYVI 186 DD++S+L SEW G+KVGTVF LMD +VL LSLFYMPL ETLYT++AV +AG VI Sbjct: 131 GGATGGDDVISVLFSEWSGLKVGTVFFLMDAVVLLLSLFYMPLVETLYTILAVSIAGQVI 190 Query: 187 TFTTSLGRPKLGKAPTIQPTLSKP 210 T T + G K K P ++ + P Sbjct: 191 TITVTYGTEKAEKKP-VRKAVRAP 213 >C0ZGK1.1 C0ZGK1_BREBN Conserved hypothetical membrane protein Length = 218 Score = 189 bits (481), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 93/188 (49%), Positives = 135/188 (71%) Query: 6 RLTIILSGTLLLAFTYYHINYQNHLTEGGFVGLSLLGKYVLGISPSLTILILDIPVLLIA 65 R ++IL G LLAF YYHIN+QNHL+EGGFVGL LL KY +SP++ +L+LDIP+ L+A Sbjct: 11 RYSMILFGACLLAFAYYHINFQNHLSEGGFVGLGLLAKYAFDLSPAMVMLLLDIPLFLVA 70 Query: 66 MIFKGRAFVLNTFISVGAFTVFYSLMERYSGWVINLQDNLPLAALLSGVLTXXXXXXXXX 125 + +GR F+ +T + AFTVFY L ER+S V+++ +PLA++L+GVLT Sbjct: 71 WLVRGRQFIWDTIFASLAFTVFYDLFERFSPIVMDMSRMMPLASVLAGVLTGLGTGLVLR 130 Query: 126 XXXXXXXDDILSLLISEWKGIKVGTVFILMDVIVLALSLFYMPLKETLYTVMAVVVAGYV 185 DDI SLLIS++ G+ +GTVF+L+DVIVL +S +++P+KE +YT++AVV++ V Sbjct: 131 YGAATGGDDIFSLLISKYTGLSIGTVFLLLDVIVLCMSFWFVPMKEMMYTILAVVISSQV 190 Query: 186 ITFTTSLG 193 IT+T + G Sbjct: 191 ITWTVNHG 198 >C4L102.1 C4L102_EXISA Putative uncharacterized protein Length = 210 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 76/209 (36%), Positives = 125/209 (59%), Gaps = 5/209 (2%) Query: 6 RLTIILSGTLLLAFTYYHINYQNHLTEGGFVGLSLLGKYVLGISPSLTILILDIPVLLIA 65 R+ I+ GTL++AF YY++N Q L EGGFVGLSLLG+Y+ I P++++++LDIP ++A Sbjct: 3 RVATIVLGTLIMAFGYYYLNEQFGLAEGGFVGLSLLGRYLFDIDPAISMIVLDIPFFIVA 62 Query: 66 MIFKGRAFVLNTFISVGAFTVFYSLMERYS--GWVINLQDNLPLAALLSGVLTXXXXXXX 123 + +KG FV ++ + ++ Y++ +R + I + AA+ SG++T Sbjct: 63 LWWKGWRFVGQAVLAASSLSLSYAMWDRLDLLTFEIQVWPATLFAAIASGIVTGYGLGLV 122 Query: 124 XXXXXXXXXDDILSLLISEWKGIKVGTVFILMDVIVLALSLFYMPLKETLYTVMAVVVAG 183 DD+ +L +S+W G+ VGT+ I+ DVIVL +SL Y+PL LYT++AV +AG Sbjct: 123 LKSGGATGGDDLFALGLSKWTGVSVGTILIIFDVIVLGISLIYLPLSNALYTLVAVSIAG 182 Query: 184 YVITFTTSLGRPKLGKAPTIQPTLSKPHD 212 V+T + P +A + P + +D Sbjct: 183 RVVTKMLVVDEP---RATPVAPNWTPKND 208 >B1YF60.1 B1YF60_EXIS2 Putative uncharacterized protein Length = 204 Score = 136 bits (342), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 78/192 (40%), Positives = 116/192 (60%), Gaps = 12/192 (6%) Query: 6 RLTIILSGTLLLAFTYYHINYQNHLTEGGFVGLSLLGKYVLGISPSLTILILDIPVLLIA 65 R+ IL+GTLL+AF YY +N Q L EGGF+GLSLLG+Y I+PS+++++LDIP + A Sbjct: 3 RIMTILAGTLLMAFGYYTLNEQFGLAEGGFIGLSLLGRYFFDINPSISMIVLDIPFFIGA 62 Query: 66 MIFKGRAFVLNTFISVGAFTVFYSLMER-------YSGWVINLQDNLPLAALLSGVLTXX 118 + FKG+ FV IS GA ++FY + R W L +AA+ SG++T Sbjct: 63 LYFKGKRFVGEALISAGALSLFYEMWYRLDLFHFPEQAWPATL-----IAAIASGIVTGY 117 Query: 119 XXXXXXXXXXXXXXDDILSLLISEWKGIKVGTVFILMDVIVLALSLFYMPLKETLYTVMA 178 DD+LS+ +S+ G+ +GT+ +D IV+ +SL Y+PL TLYT++A Sbjct: 118 GLGLVLKSGAATGGDDLLSMGLSKLTGLSIGTILFGLDAIVILISLVYLPLSLTLYTLLA 177 Query: 179 VVVAGYVITFTT 190 V +AG V++ T Sbjct: 178 VAIAGRVVSVMT 189 >Q81KV4.1 Q81KV4_BACAN Putative uncharacterized protein Length = 220 Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust. Identities = 79/206 (38%), Positives = 122/206 (59%), Gaps = 6/206 (2%) Query: 9 IILSGTLLLAFTYYHINYQNHLTEGGFVGLSLLGKYVLGISPSLTILILDIPVLLIAMIF 68 ++L G+ +LA YHI++QNHLTEGGFVG++L + ISPS++ +I+DIP++L+ F Sbjct: 15 MVLIGSFILAAALYHIHFQNHLTEGGFVGIALFIQNFYDISPSISTVIMDIPIILLCASF 74 Query: 69 KGRAFVLNTFISVGAFTVFYSLMERYSGWVINLQDNLPLAALLSGVLTXXXXXXXXXXXX 128 GR V +F+ +F VFYSLME YS + I+L +NL +AA++ G L Sbjct: 75 LGRKMVGYSFLGSISFGVFYSLMENYSPFTIDLSNNLFIAAVVGGALAGIGLGFILRFGG 134 Query: 129 XXXXDDILSLLISEWKGIKVGTVFILMDVIVLALSLFYMPLKETLYTVMAVVVAGYVITF 188 DDIL++++S+ +G +F + D IVLALSL+Y+ E +T++++ V + Sbjct: 135 ATGGDDILTIVLSKKTRFTIGQIFFVFDAIVLALSLYYLNWTEIAFTILSIAVQAKTLDL 194 Query: 189 TTSLGRPKLGKAPTIQPT---LSKPH 211 + PK KA QP +SK H Sbjct: 195 ---IYYPKTEKAEEKQPVSIPMSKKH 217 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.327 0.144 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,142,251,982 Number of extensions: 42887076 Number of successful extensions: 144977 Number of sequences better than 1.0e-05: 1126 Number of HSP's gapped: 144409 Number of HSP's successfully gapped: 1126 Length of query: 216 Length of database: 3,060,696,203 Length adjustment: 130 Effective length of query: 86 Effective length of database: 1,835,964,253 Effective search space: 157892925758 Effective search space used: 157892925758 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 128 (53.9 bits)