BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0500.0007.p (270 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B5H4J7.1 B5H4J7_STRPR CalU2 214 8e-54 B9XL20.1 B9XL20_9BACT Putative uncharacterized protein 205 3e-51 C4BV98.1 C4BV98_9FUSO Putative uncharacterized protein 204 5e-51 A9B7W1.1 A9B7W1_HERA2 Putative uncharacterized protein 202 4e-50 B5QWA9.1 B5QWA9_SALEP Putative uncharacterized protein 196 2e-48 >B5H4J7.1 B5H4J7_STRPR CalU2 Length = 319 Score = 214 bits (544), Expect = 8e-54, Method: Compositional matrix adjust. Identities = 101/212 (47%), Positives = 148/212 (69%) Query: 41 GDWGQAYENSSEDVVKALVKHSASFPALRKLFIGEMGYEECEISWITQSDLSPLLPAFPE 100 G W +AYE+ +V+ AL+ P LR LF+G++ +E+CEISWI Q +++ LL FPE Sbjct: 74 GSWSEAYESGPGEVISALLGAKEKLPRLRGLFVGDITFEQCEISWINQGEVTRLLDGFPE 133 Query: 101 LQSLTIQGGNGLSLSKLQHDKLEELIIITGGLGKAVLAQIAASELPNLRKLELYLGVEDY 160 L+ ++GG L ++H++LE L++ +GGL AV+ IAAS+LP L L+L+LG Y Sbjct: 134 LEHFGVRGGQDLVFPAVKHERLETLVVESGGLDVAVVRGIAASDLPALENLDLWLGTSWY 193 Query: 161 GFDGSLADLIPLMEPGKFPKLTYLALKNSEIQDEIAIAVADAPILDQLDTLDLSMGTLSD 220 G + ++DL P + + P+L YLAL+NSEIQDEIA+A+A AP++ +L+TLDLSMGTL D Sbjct: 194 GANADVSDLEPFLSGTRLPRLRYLALRNSEIQDEIAVALAGAPVVARLETLDLSMGTLGD 253 Query: 221 EGAEVLLASERIKSLKALNLSHHYMSDEMLAR 252 +GAE LL + + LK L+L HH+MS+ M+ R Sbjct: 254 DGAEALLNGQPLTHLKKLDLHHHFMSEAMVQR 285 >B9XL20.1 B9XL20_9BACT Putative uncharacterized protein Length = 331 Score = 205 bits (522), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 102/219 (46%), Positives = 151/219 (68%), Gaps = 2/219 (0%) Query: 41 GDWGQAY--ENSSEDVVKALVKHSASFPALRKLFIGEMGYEECEISWITQSDLSPLLPAF 98 G W + + E +SEDV+ L + + P ++ LFIG++ YEECEISW+ Q+D++PL A+ Sbjct: 87 GYWFKDFDMEKTSEDVIVNLAMGATALPNVQALFIGDITYEECEISWLHQADVTPLFRAY 146 Query: 99 PELQSLTIQGGNGLSLSKLQHDKLEELIIITGGLGKAVLAQIAASELPNLRKLELYLGVE 158 P LQ L ++G +GL + +H +L+ LII GGL A L ++ SE P L LEL+LG E Sbjct: 147 PRLQHLGVRGSDGLKIGPAKHSELKSLIIQCGGLPAATLREVFQSEFPALEHLELWLGEE 206 Query: 159 DYGFDGSLADLIPLMEPGKFPKLTYLALKNSEIQDEIAIAVADAPILDQLDTLDLSMGTL 218 +YG D ++ADL P++ FP L YL L++S + D++A AVA+API+ +++TLDLSMG L Sbjct: 207 NYGGDATVADLEPILSGRLFPNLRYLGLRDSAMADQVASAVANAPIVQRIETLDLSMGNL 266 Query: 219 SDEGAEVLLASERIKSLKALNLSHHYMSDEMLARWQSSG 257 S+EGA+ LLAS +K LK L+L HH++S + +A+ Q G Sbjct: 267 SNEGADALLASPTLKRLKKLDLHHHFISPDRVAKLQQLG 305 >C4BV98.1 C4BV98_9FUSO Putative uncharacterized protein Length = 289 Score = 204 bits (520), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 99/215 (46%), Positives = 153/215 (71%), Gaps = 2/215 (0%) Query: 41 GDWGQAYENSSEDVVKALVKHSASFPALRKLFIGEMGYEECEISWITQSDLSPLLPAFPE 100 G W AY+N+ + +VK L ++ FP L++L+ G++ +EECE+SWI +DL+PL+ +F + Sbjct: 44 GMWESAYDNTPDKLVKYLTENKDKFPNLKELYFGDISWEECEVSWIQNTDLAPLVNSF-D 102 Query: 101 LQSLTIQGGNGLSLSKLQHDKLEELIIITGGLGKAVLAQIAASELPNLRKLELYLGVEDY 160 L++LT++GG GL ++ L++L II+GG GK+VL I +ELP+L LE+Y+GV++Y Sbjct: 103 LETLTVKGGCGLRFKDMKSSSLKKLEIISGGTGKSVLNDIINAELPSLEHLEIYMGVDNY 162 Query: 161 GFDGSLADLIPLMEPGKFPKLTYLALKNSEIQDEIAIAVADAPILDQLDTLDLSMGTLSD 220 GFDGS+ D+IP + FP L YL LKNS+I+DEI AV IL QL+ LDLS GTL + Sbjct: 163 GFDGSIQDIIPFTKKENFPNLKYLGLKNSDIEDEICEAVLAGDILPQLEILDLSYGTLGN 222 Query: 221 EGAEVLLAS-ERIKSLKALNLSHHYMSDEMLARWQ 254 +G +LLA+ ++I LK LN+ ++Y ++++L + Q Sbjct: 223 KGVNMLLANIDKISHLKELNIHYNYAAEDILKQLQ 257 >A9B7W1.1 A9B7W1_HERA2 Putative uncharacterized protein Length = 313 Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 100/206 (48%), Positives = 140/206 (67%) Query: 54 VVKALVKHSASFPALRKLFIGEMGYEECEISWITQSDLSPLLPAFPELQSLTIQGGNGLS 113 V+ ++ P L+ LF+G+ YEE EISWITQ + +P+L AFP+L+ L I+GG+ LS Sbjct: 84 VLASISAAREQLPLLKALFVGDFTYEEWEISWITQGNYAPVLAAFPQLEYLVIRGGSELS 143 Query: 114 LSKLQHDKLEELIIITGGLGKAVLAQIAASELPNLRKLELYLGVEDYGFDGSLADLIPLM 173 +QH +L+ LII TGGL V+ + A++ P L LEL+LG + YG D +LADL P++ Sbjct: 144 FGAVQHQQLKALIIQTGGLAAQVVRDVVAADFPALEHLELWLGCDFYGGDSTLADLQPIL 203 Query: 174 EPGKFPKLTYLALKNSEIQDEIAIAVADAPILDQLDTLDLSMGTLSDEGAEVLLASERIK 233 + FP L L L++ E D++A A+ DAPIL+Q+ LDLS+G LSD GAEVL ASE I+ Sbjct: 204 KAECFPNLAVLGLRDCEYADDLAQALVDAPILEQISYLDLSLGNLSDVGAEVLFASEAIR 263 Query: 234 SLKALNLSHHYMSDEMLARWQSSGFS 259 SL L+L HHYMS+E+L W + G + Sbjct: 264 SLDFLDLHHHYMSNELLDCWATIGLN 289 >B5QWA9.1 B5QWA9_SALEP Putative uncharacterized protein Length = 282 Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 101/218 (46%), Positives = 149/218 (68%), Gaps = 2/218 (0%) Query: 41 GDWGQAYEN-SSEDVVKALVKHSASFPALRKLFIGEMGYEECEISWITQSDLSPLLPAFP 99 G+WG +E+ + + ++ +V++++ F L LFIG+M E+CEISWI Q D S L A P Sbjct: 37 GNWGDCWEDETCQPIIDMIVENASRFTHLESLFIGDMESEDCEISWIKQGDYSRLYAALP 96 Query: 100 ELQSLTIQGGNGLSLSKLQHDKLEELIIITGGLGKAVLAQIAASELPNLRKLELYLGVED 159 L+ L I+G + L L + H+KLE L II+GG+ VLA++ ++LP L+ L+L+LGVE+ Sbjct: 97 NLKELIIKGASDLRLGAIHHEKLEHLEIISGGIPSNVLAELQNAQLPALKTLKLFLGVEE 156 Query: 160 YGFDGSLADLIPLMEPGKFPKLTYLALKNSEIQDEIAIAVADAPILDQLDTLDLSMGTLS 219 YGFDGSL D++ L FP+LT+L L NSE QD+IA V ++ IL QL+ L+LS GTL+ Sbjct: 157 YGFDGSLDDVMALASKDLFPQLTHLGLMNSEEQDDIARRVLESNILPQLNVLELSCGTLT 216 Query: 220 DEGAEVLLA-SERIKSLKALNLSHHYMSDEMLARWQSS 256 D GAE LL +RI L+ L+L HHY++ EM + +++ Sbjct: 217 DNGAEALLEHKDRIAHLETLDLHHHYLTPEMQEKLKAT 254 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.134 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,429,187,128 Number of extensions: 53201651 Number of successful extensions: 110253 Number of sequences better than 1.0e-05: 66 Number of HSP's gapped: 110192 Number of HSP's successfully gapped: 66 Length of query: 270 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 137 Effective length of database: 1,807,701,208 Effective search space: 247655065496 Effective search space used: 247655065496 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 130 (54.7 bits)