BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0500.0006.p (646 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KBB4.1 B3KBB4_9BACI PTS system, fructose subfamily, IIC subunit 879 0.0 C1PD36.1 C1PD36_BACCO PTS system, fructose subfamily, IIC subunit 768 0.0 C2BZQ7.1 C2BZQ7_LISGR PTS family fructose/mannitol (Fru) porter ... 728 0.0 A8UBR1.1 A8UBR1_9LACT PTS system fructose-specific enzyme II BC ... 679 0.0 Q8CZE7.1 Q8CZE7_OCEIH PTS system, fructose-specific enzyme II, B... 642 0.0 >B3KBB4.1 B3KBB4_9BACI PTS system, fructose subfamily, IIC subunit Length = 656 Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust. Identities = 457/654 (69%), Positives = 509/654 (77%), Gaps = 10/654 (1%) Query: 1 MKITDLLVKETMIMNLQAVSKEAAIDELIASLAASGRINDPVLFKKKILEREAQSSTGIG 60 M+ITDL+++ETMIM+L+AV+KEAAIDELI SLAASGR+NDPVLFK+ IL+REA+SSTGIG Sbjct: 1 MRITDLMIQETMIMDLKAVTKEAAIDELIGSLAASGRVNDPVLFKEMILKREAESSTGIG 60 Query: 61 GGIAMPHAKTRAVNEPTVVFAKSAAGVDFASLDEEPAKLFFMIAAPEGAGNMHMRTLAAL 120 GGIAMPHAKT+AVNEPTVVFAKS+ GVDF +LD E A +FFMIAAPEGAGN H+RTLAAL Sbjct: 61 GGIAMPHAKTKAVNEPTVVFAKSSGGVDFEALDGEAAHVFFMIAAPEGAGNTHLRTLAAL 120 Query: 121 SRLLIESDFIEALMNAGTPDEVVALFDXXXXXXXXXXXXXXXXXXXXXGGTKQEAPER-V 179 SRLLI+++FI LM A TP EV ALFD + + R Sbjct: 121 SRLLIDAEFIAQLMKAETPAEVTALFDSKQAVEEAAKAEREAAKKREAAQKEAKNKHRES 180 Query: 180 IVGNPASQS---------FVVAVTACPTGIAHTYMAEDALKKKAKEMGVNIRVETNGSEG 230 + PA Q FVVAVTACPTGIAHT+MAEDALKKKA+EMGV IRVETNGSEG Sbjct: 181 DIAAPADQRDVSAVASTPFVVAVTACPTGIAHTFMAEDALKKKAQEMGVEIRVETNGSEG 240 Query: 231 AQNVLTADEIARASGVIIAADKNVEMARFAGKPVLQRPVSDGIRKPEELITKAVKGEAPI 290 AQNVLT +EI RASGVIIAADKNVEMARF GKPVLQRPVSDGIRK EELI KA+ GEAPI Sbjct: 241 AQNVLTEEEIRRASGVIIAADKNVEMARFNGKPVLQRPVSDGIRKSEELIRKAMGGEAPI 300 Query: 291 YRSEGRGGDEAPAVKSGSIGSRIYKDLMNGISHMLPFVVGGGILLAISFLIEQVASVDNP 350 YRS+G G +A + GSIG+++YKDLMNGISHMLPFVVGGGILLAISFLIEQ+A D+P Sbjct: 301 YRSDGGGEPKAKDAEKGSIGTKVYKDLMNGISHMLPFVVGGGILLAISFLIEQLAGEDHP 360 Query: 351 IVKLLQTIGGGDGAFHFLIPILAGFIALSIGDRPALMPGMVGGYMXXXXXXXXXXXXXXX 410 + +LLQTIGGGDGAFHFLIP+LAGFIALSIGDRPALMPGMVGG M Sbjct: 361 LFQLLQTIGGGDGAFHFLIPVLAGFIALSIGDRPALMPGMVGGLMALNSNSGFLGGLAAG 420 Query: 411 XXXXYVVILLRKTFAGLPKTLDGLKPILLYPVFSLLITGGIMFYLFDPVFSWINEGLIDG 470 YVVILLRK FAGLP+ LDGLKPILLYPV LLITG IMFYLFDP FSWIN GLID Sbjct: 421 FLAGYVVILLRKAFAGLPRALDGLKPILLYPVVGLLITGTIMFYLFDPFFSWINLGLIDI 480 Query: 471 LNHLGTGNAVXXXXXXXXXXXXXXXXPFNKAAYTFAIGVFTSSGNTNGLXXXXXXXXXXX 530 LN+LGTGNAV PFNKAAY FAIGVFTSSGNTNG Sbjct: 481 LNNLGTGNAVILGLILGGMMSIDMGGPFNKAAYAFAIGVFTSSGNTNGAMMAAVMAGGMV 540 Query: 531 PPLAIALAXXXXXXXXXXXXRKSGLTNYVLGLSFITEGAIPFAAADPLRVLTSCIIGSAV 590 PPLAIALA RKSG+TNYV+GLSFITEGAIPFAAADPLRVLTSCI+GSAV Sbjct: 541 PPLAIALATTFFKHKFTEQERKSGVTNYVMGLSFITEGAIPFAAADPLRVLTSCILGSAV 600 Query: 591 AGGLTQLWNLNVPAPHGGIFVAALSSNALLFILAVLIGSVISGLTLGLWKKPLK 644 AGGLTQLW++NVPAPHGGIFVAAL+++ALLF+L+VLIGSVISG+ LG+WKKPL+ Sbjct: 601 AGGLTQLWSINVPAPHGGIFVAALANHALLFLLSVLIGSVISGVLLGVWKKPLE 654 >C1PD36.1 C1PD36_BACCO PTS system, fructose subfamily, IIC subunit Length = 632 Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/646 (60%), Positives = 474/646 (73%), Gaps = 22/646 (3%) Query: 1 MKITDLLVKETMIMNLQAVSKEAAIDELIASLAASGRINDPVLFKKKILEREAQSSTGIG 60 MKITDLLV+ETM+M++QA KE AIDELIASL+ SGRINDPVLFK+ IL+RE +SSTGIG Sbjct: 1 MKITDLLVQETMVMDMQATKKEEAIDELIASLSKSGRINDPVLFKEMILKREQESSTGIG 60 Query: 61 GGIAMPHAKTRAVNEPTVVFAKSAAGVDFASLDEEPAKLFFMIAAPEGAGNMHMRTLAAL 120 GIAMPHAKT+AVN+ TVVF +S GVD+ +LD +P+ LFFMIAAPE A + H++TLAAL Sbjct: 61 DGIAMPHAKTKAVNKATVVFGRSKKGVDYEALDGQPSYLFFMIAAPEDAADTHLQTLAAL 120 Query: 121 SRLLIESDFIEALMNAGTPDEVVALFDXXXXXXXXXXXXXXXXXXXXXGGTKQEAPERVI 180 SRLLI+ +F++ L A TP EV LFD +EA E Sbjct: 121 SRLLIDQEFVQQLKQAETPAEVSRLFDEKQAEK-----------------EGKEAAE-TG 162 Query: 181 VGNPASQSFVVAVTACPTGIAHTYMAEDALKKKAKEMGVNIRVETNGSEGAQNVLTADEI 240 GN + +VAVTACPTGIAHTYMAED+LKKKA+EMG+ IRVETNGSEG ++ LT DEI Sbjct: 163 AGNGSDDKLIVAVTACPTGIAHTYMAEDSLKKKAEEMGIPIRVETNGSEGVKHELTKDEI 222 Query: 241 ARASGVIIAADKNVEMARFAGKPVLQRPVSDGIRKPEELITKAVKGEAPIYRSEG--RGG 298 RA GVI+AADK VEMARF GK VLQ PVSD IR+PE+LI + ++ AP+Y ++ R Sbjct: 223 NRAVGVIVAADKKVEMARFDGKRVLQTPVSDAIRQPEDLINRVLEQHAPVYHADSTERTN 282 Query: 299 DEAPAVKSGSIGSRIYKDLMNGISHMLPFVVGGGILLAISFLIEQVASVDNPIVKLLQTI 358 D+ PA K S+ IYKDLMNGISHMLPFVVGGGILLAISFLIE+ A N I K+L I Sbjct: 283 DDEPAEKK-SVWGTIYKDLMNGISHMLPFVVGGGILLAISFLIERTAGEHNTIFKMLSAI 341 Query: 359 GGGD-GAFHFLIPILAGFIALSIGDRPALMPGMVGGYMXXXXXXXXXXXXXXXXXXXYVV 417 GGD GAFHFLI ILAGFIA SIGDRPALMPGMVGGY+ Y++ Sbjct: 342 AGGDTGAFHFLIAILAGFIASSIGDRPALMPGMVGGYLASSSNAGFLGGLAAGFLAGYII 401 Query: 418 ILLRKTFAGLPKTLDGLKPILLYPVFSLLITGGIMFYLFDPVFSWINEGLIDGLNHLGTG 477 + L+K FAGLP+ L+GLKPIL++PV LLITGG+M+Y+FDP+F WIN GLI GLN+LGTG Sbjct: 402 VFLKKVFAGLPQALNGLKPILIFPVLGLLITGGLMYYIFDPIFKWINTGLIGGLNNLGTG 461 Query: 478 NAVXXXXXXXXXXXXXXXXPFNKAAYTFAIGVFTSSGNTNGLXXXXXXXXXXXPPLAIAL 537 NAV PFNKAAYTFAIGVFTSSGNTNGL PPLAIAL Sbjct: 462 NAVLLGIVLGGMMAIDMGGPFNKAAYTFAIGVFTSSGNTNGLMMAAVMAGGMVPPLAIAL 521 Query: 538 AXXXXXXXXXXXXRKSGLTNYVLGLSFITEGAIPFAAADPLRVLTSCIIGSAVAGGLTQL 597 A +++G+TNYVLGLSFITEGAIPFAA+DPLRVL S I+GSA+AGGLTQ Sbjct: 522 ATTFFRNKFTDQEKEAGITNYVLGLSFITEGAIPFAASDPLRVLGSSIVGSAIAGGLTQF 581 Query: 598 WNLNVPAPHGGIFVAALSSNALLFILAVLIGSVISGLTLGLWKKPL 643 W++N+PAPHGGIFV L+++A+LF+++++IG+++SGL LGLWK+P+ Sbjct: 582 WHINIPAPHGGIFVVFLANHAILFLVSIIIGAIVSGLILGLWKRPV 627 >C2BZQ7.1 C2BZQ7_LISGR PTS family fructose/mannitol (Fru) porter component IIABC Length = 621 Score = 728 bits (1880), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/645 (59%), Positives = 462/645 (71%), Gaps = 29/645 (4%) Query: 1 MKITDLLVKETMIMNLQAVSKEAAIDELIASLAASGRINDPVLFKKKILEREAQSSTGIG 60 MKIT+LL KETMI++LQA +KEA IDELI+SL +G+INDP LFK++I++REAQSSTGIG Sbjct: 1 MKITELLSKETMILSLQATTKEAVIDELISSLERNGKINDPKLFKEEIMKREAQSSTGIG 60 Query: 61 GGIAMPHAKTRAVNEPTVVFAKSAAGVDFASLDEEPAKLFFMIAAPEGAGNMHMRTLAAL 120 GIAMPHAKT+AVN PTVVFAKS G+D+ SLD +PA+LFFMIAA +GA H+ TLAAL Sbjct: 61 EGIAMPHAKTKAVNVPTVVFAKSEQGIDYESLDGQPAELFFMIAATDGANETHLETLAAL 120 Query: 121 SRLLIESDFIEALMNAGTPDEVVALFDXXXXXXXXXXXXXXXXXXXXXGGTKQEAPERVI 180 SRLL+ DF++AL N TPDEV+ALFD +Q A E V Sbjct: 121 SRLLVNPDFVQALKNTKTPDEVIALFD-----------------------EQQSAGEEVE 157 Query: 181 VGNP-ASQSFVVAVTACPTGIAHTYMAEDALKKKAKEMGVNIRVETNGSEGAQNVLTADE 239 P Q FVVAVTACPTGIAHTYMAEDALK KAKEMGV I+VETNGSEG +N LTA + Sbjct: 158 TETPNEEQPFVVAVTACPTGIAHTYMAEDALKNKAKEMGVAIKVETNGSEGVKNRLTAAD 217 Query: 240 IARASGVIIAADKNVEMARFAGKPVLQRPVSDGIRKPEELITKAVKGEAPIYRSEGRGGD 299 I RA+GVIIAADKNVEMARF GK + +RPVSDGIRKPE+LI A+ +APIY S G Sbjct: 218 IERAAGVIIAADKNVEMARFDGKHLQERPVSDGIRKPEQLIQTALDQKAPIYHSNGDIAK 277 Query: 300 EAPAVKSGSIGSRIYKDLMNGISHMLPFVVGGGILLAISFLIEQVASVDNPIVKLLQTIG 359 E K+ SIGS+IYKDLMNGISHMLPFVVGGGI++A+SFLIE+ + + +LL TIG Sbjct: 278 EENTEKA-SIGSKIYKDLMNGISHMLPFVVGGGIMIALSFLIERFWP-HSELFRLLSTIG 335 Query: 360 GGD-GAFHFLIPILAGFIALSIGDRPALMPGMVGGYMXXXXXXXXXXXXXXXXXXXYVVI 418 G D GAF LIPILAG+IA SIG+RPALMPGMVGG M Y+VI Sbjct: 336 GNDQGAFTLLIPILAGYIASSIGERPALMPGMVGGLMAVHSNAGFLGGLVAGFLAGYIVI 395 Query: 419 LLRKTFAGLPKTLDGLKPILLYPVFSLLITGGIMFYLFDPVFSWINEGLIDGLNHLGTGN 478 L+K FA LPK+L+GLKPILLYP+F LLITG +M+++ +P+FS IN +I L HLGT N Sbjct: 396 GLKKVFAKLPKSLEGLKPILLYPIFGLLITGTLMYFIVNPIFSTINSAMIQALEHLGTAN 455 Query: 479 AVXXXXXXXXXXXXXXXXPFNKAAYTFAIGVFTSSGNTNGLXXXXXXXXXXXPPLAIALA 538 AV PFNKAAYTF+IGVFT++ +G PPLAIA A Sbjct: 456 AVLLGVVLGGMMAIDMGGPFNKAAYTFSIGVFTAT--QDGALMAATMAGGMVPPLAIAFA 513 Query: 539 XXXXXXXXXXXXRKSGLTNYVLGLSFITEGAIPFAAADPLRVLTSCIIGSAVAGGLTQLW 598 +++G+TNYVLG +FITEGAIPFAAADPLRV+ S +IG+ AGGLTQ W Sbjct: 514 SSLFSKKFTQQEKQAGITNYVLGAAFITEGAIPFAAADPLRVIVSSVIGAMTAGGLTQFW 573 Query: 599 NLNVPAPHGGIFVAALSSNALLFILAVLIGSVISGLTLGLWKKPL 643 ++NVPAPHGG+FV+ L++ +LF++A++IG+VISGL G WKKPL Sbjct: 574 SVNVPAPHGGVFVSLLANKPVLFLVAIIIGAVISGLIYGFWKKPL 618 >A8UBR1.1 A8UBR1_9LACT PTS system fructose-specific enzyme II BC component Length = 634 Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust. Identities = 356/645 (55%), Positives = 443/645 (68%), Gaps = 16/645 (2%) Query: 1 MKITDLLVKETMIMNLQAVSKEAAIDELIASLAASGRINDPVLFKKKILEREAQSSTGIG 60 M I DLL+KE MIM+L++ +KE IDE++ASL A+ RIND LFK+ I+ RE+ +STG+G Sbjct: 1 MNINDLLIKEVMIMDLKSTTKEGVIDEMVASLKANNRINDADLFKEGIMHRESLTSTGLG 60 Query: 61 GGIAMPHAKTRAVNEPTVVFAKSAAGVDFASLDEEPAKLFFMIAAPEGAGNMHMRTLAAL 120 GIAMPHAKT AVNE TV+FAKS GVD+ SLD +PA LFFMIAAPEGA + H++ LA L Sbjct: 61 DGIAMPHAKTTAVNEATVLFAKSTNGVDYNSLDGQPAFLFFMIAAPEGANDTHLQALANL 120 Query: 121 SRLLIESDFIEALMNAGTPDEVVALFDXXXXXXXXXXXXXXXXXXXXXGGTKQEAPERVI 180 SRLLI DF+ +L + TP+EV +LF +AP+ Sbjct: 121 SRLLIHPDFVLSLKESKTPEEVRSLF---------AAAQDVQEKEAAAELEATKAPK--- 168 Query: 181 VGNPASQSFVVAVTACPTGIAHTYMAEDALKKKAKEMGVNIRVETNGSEGAQNVLTADEI 240 + + FV+AVTACPTGIAHTYMAEDALKKKA EMGV I+VETNGS+G +N LTA++I Sbjct: 169 LNQDVKKPFVIAVTACPTGIAHTYMAEDALKKKAAEMGVEIKVETNGSDGIKNRLTAEDI 228 Query: 241 ARASGVIIAADKNVEMARFAGKPVLQRPVSDGIRKPEELITKAVKGEAPIYRSEGRGGDE 300 RA GVIIAADK VE+ARF GKP+LQRPVSDGIRK EELITKA+ +APIY SEG+ + Sbjct: 229 KRADGVIIAADKKVELARFDGKPMLQRPVSDGIRKTEELITKAMNKQAPIYSSEGQKDES 288 Query: 301 APAVKSGSIGSRIYKDLMNGISHMLPFVVGGGILLAISFLIEQVASVDNPIVKLLQTIGG 360 +SGS +R+YKDLMNGIS MLPFV+GGGIL+AISFL+E N + L T+ Sbjct: 289 VDNEESGSWVNRVYKDLMNGISTMLPFVIGGGILMAISFLVESFLGDSNALFLFLNTV-- 346 Query: 361 GDGAFHFLIPILAGFIALSIGDRPALMPGMVGGYMXXXXXXXXXXXXXXXXXXXYVVILL 420 G AF+FLIPILAG+IALSI DRP LMPGMVGG + Y V+ L Sbjct: 347 GSNAFNFLIPILAGYIALSIADRPGLMPGMVGGLLAVNSNAGFLGGLAAGFIAGYTVLAL 406 Query: 421 RKTFAGLPKTLDGLKPILLYPVFSLLITGGIMFYLFDPVFSWINEGLIDGLNHLGTGNAV 480 +K GLP++L+GLK IL YP+ LL+TG +MF++ P+F+ IN +I L +LGT NAV Sbjct: 407 KKALKGLPQSLNGLKAILFYPILGLLVTGALMFFIVGPIFATINLAMITFLENLGTANAV 466 Query: 481 XXXXXXXXXXXXXXXXPFNKAAYTFAIGVFTSSGNTNGLXXXXXXXXXXXPPLAIALAXX 540 PFNKAAY F+IG+FT SG +G PPLAIALA Sbjct: 467 ILGALLGGMMAIDMGGPFNKAAYAFSIGIFTDSG--DGALMAAVMAGGMVPPLAIALAST 524 Query: 541 XXXXXXXXXXRKSGLTNYVLGLSFITEGAIPFAAADPLRVLTSCIIGSAVAGGLTQLWNL 600 RKS LTNYV+GLSFITEGAIPFAAADPLR + S +IG+A+AGGLTQLW + Sbjct: 525 FFKNKFNEDERKSALTNYVMGLSFITEGAIPFAAADPLRTIGSSVIGAAIAGGLTQLWGI 584 Query: 601 NVPAPHGGIFVAALSSNALLFILAVLIGSVISGLTLGLWKKPLKT 645 +PAPHGGIFV ALS++ LF++A++IG+++S + LGLW+KP+ T Sbjct: 585 TIPAPHGGIFVVALSNHWFLFLVALIIGTIVSAVILGLWRKPVTT 629 >Q8CZE7.1 Q8CZE7_OCEIH PTS system, fructose-specific enzyme II, BC component (EC 2.7.1.69) EC=2.7.1.69 Length = 626 Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/644 (51%), Positives = 434/644 (67%), Gaps = 21/644 (3%) Query: 1 MKITDLLVKETMIMNLQAVSKEAAIDELIASLAASGRINDPVLFKKKILEREAQSSTGIG 60 M + DLL K+ MIM+L++ K++ I+E+I +L IND FK+ IL REAQSSTG+G Sbjct: 1 MDVIDLLRKDIMIMDLKSTDKQSVIEEMIHNLHKYKVINDMDTFKEAILNREAQSSTGLG 60 Query: 61 GGIAMPHAKTRAVNEPTVVFAKSAAGVDFASLDEEPAKLFFMIAAPEGAGNMHMRTLAAL 120 GIAMPHAKT +VNEP V+FAKS G+++ SLD +PA LFFMIA P+ + + H++TLA+L Sbjct: 61 DGIAMPHAKTSSVNEPAVLFAKSNQGIEYDSLDGQPAHLFFMIAVPDDSNDTHLQTLASL 120 Query: 121 SRLLIESDFIEALMNAGTPDEVVALFDXXXXXXXXXXXXXXXXXXXXXGGTKQEAPERVI 180 S+LL+ES F+E L TP+EV LF K+E Sbjct: 121 SKLLMESTFVEKLNATSTPEEVQQLF----------------VSESVEDTPKEELQADTS 164 Query: 181 VGNPASQSFVVAVTACPTGIAHTYMAEDALKKKAKEMGVNIRVETNGSEGAQNVLTADEI 240 + F+VAVTACPTGIAHT+MAEDALKK+AKEM ++I+VETNGS+GA+N LT+D+I Sbjct: 165 QNGSNERPFIVAVTACPTGIAHTFMAEDALKKQAKEMNIDIKVETNGSDGAKNQLTSDDI 224 Query: 241 ARASGVIIAADKNVEMARFAGKPVLQRPVSDGIRKPEELITKAVKGEAPIYR-SEGRGGD 299 RA+ VIIAA K VEM RF GK V++RPVSDGI+K EEL+TKA+ +APIY+ + Sbjct: 225 QRANAVIIAASKKVEMERFNGKHVIERPVSDGIKKTEELLTKAIHQDAPIYQGASSSNNS 284 Query: 300 EAPAVKSGSIGSRIYKDLMNGISHMLPFVVGGGILLAISFLIEQVASVDNPIVKLLQTIG 359 E +S S+ +IYKDLMNGISHMLPFV+GGGI++AISFL E V ++ I L +G Sbjct: 285 EHEDNQSTSLWGKIYKDLMNGISHMLPFVIGGGIIMAISFLFESVLGSESEIFSFLNDLG 344 Query: 360 GGDGAFHFLIPILAGFIALSIGDRPALMPGMVGGYMXXXXXXXXXXXXXXXXXXXYVVIL 419 G AF+ LIPILAG+IA+SI DRP LMPGMV G + Y+V+ Sbjct: 345 G--NAFNLLIPILAGYIAMSIADRPGLMPGMVAGLLAFNSDAGFIGGLVGGFLAGYIVVG 402 Query: 420 LRKTFAGLPKTLDGLKPILLYPVFSLLITGGIMFYLFDPVFSWINEGLIDGLNHLGTGNA 479 L+ F G+P++LDG+KPILLYPVF L TG +M+++ P+FS +N +++ L LGTGNA Sbjct: 403 LKYVFKGIPRSLDGIKPILLYPVFGLFFTGLLMYFIIGPIFSGLNGIMVEFLQGLGTGNA 462 Query: 480 VXXXXXXXXXXXXXXXXPFNKAAYTFAIGVFTSSGNTNGLXXXXXXXXXXXPPLAIALAX 539 V PFNKAAYTF+IG+FTS+G +G PPLAIA+A Sbjct: 463 VILGALLGGMMAIDMGGPFNKAAYTFSIGIFTSTG--DGSLMAAVMAGGMVPPLAIAVAT 520 Query: 540 XXXXXXXXXXXRKSGLTNYVLGLSFITEGAIPFAAADPLRVLTSCIIGSAVAGGLTQLWN 599 RKSG+TNYV+GLSFITEGAIPFAAADPLRV+ S +IG+A+AGGLTQLWN Sbjct: 521 TLFKNKFDEAERKSGVTNYVMGLSFITEGAIPFAAADPLRVIGSSVIGAAIAGGLTQLWN 580 Query: 600 LNVPAPHGGIFVAALSSNALLFILAVLIGSVISGLTLGLWKKPL 643 ++PAPHGG+FV L+ L F+L++LIG++I+ L LG W+KP+ Sbjct: 581 SSIPAPHGGLFVIPLAEGPLFFLLSLLIGTIITALILGFWRKPV 624 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,319,792,781 Number of extensions: 132512166 Number of successful extensions: 364296 Number of sequences better than 1.0e-05: 2814 Number of HSP's gapped: 358496 Number of HSP's successfully gapped: 3258 Length of query: 646 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 504 Effective length of database: 1,722,912,073 Effective search space: 868347684792 Effective search space used: 868347684792 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 135 (56.6 bits)