BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0495.0014.p (364 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DCK7.1 B1DCK7_9BACL Putative uncharacterized protein 254 1e-65 C1I4V2.1 C1I4V2_9CLOT Putative uncharacterized protein 227 2e-57 C1AAE0.1 C1AAE0_GEMAT Putative uncharacterized protein 200 2e-49 A9AXS7.1 A9AXS7_HERA2 Putative uncharacterized protein 194 9e-48 Q24Y85.1 Q24Y85_DESHY Putative uncharacterized protein 178 7e-43 >B1DCK7.1 B1DCK7_9BACL Putative uncharacterized protein Length = 611 Score = 254 bits (648), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 140/290 (48%), Positives = 181/290 (62%), Gaps = 3/290 (1%) Query: 35 GDLTVNGGSFTINSADDALHSNSNVSVTNGEFKITAGDDGIHADSLTSLSGGTIDITKSY 94 G + + GG++ I S D LHS +S+++G+ I AGDDGIHA++ ++GG+IDITKSY Sbjct: 265 GIIVLQGGTYNIQSGKDGLHSTGGLSISDGDLTIAAGDDGIHAETALEIAGGSIDITKSY 324 Query: 95 EGIEGGNITISGGDIRVVAXXXXXXXXXXXXXXAAQGTAQQDQFXXXXXXXXXXXXXX-- 152 EGIE +ITI+GGDI++ A +G A Sbjct: 325 EGIEAADITIAGGDIKLAASDDGVNAATGADSSGGEGAAPGGGGQQASGASEGLLTISGG 384 Query: 153 -VTVDSTGDGLDSNGSVSMTGGTVIVNGPTNDGNGPLDYDGTFDMTGGLLVAAGSSGMAQ 211 + VD+ GDGLD+NGS+ MTGGTV+VNGPT + NG LDYDGTF+MTGG LVAAGSSGM Q Sbjct: 385 NLYVDADGDGLDANGSIVMTGGTVMVNGPTENNNGALDYDGTFNMTGGTLVAAGSSGMVQ 444 Query: 212 APGEDSSQYSVSMSFTAAQQAGTLVHLEDGDGNNILTFAPSKNFSSVVVSSPDLKKXXXX 271 A + S+Q + M F QQAGTLVHLED G I T+AP+KN+ +V +S PDL K Sbjct: 445 AASDSSTQAGILMMFPETQQAGTLVHLEDESGKTIATYAPTKNYQAVYISMPDLAKDASY 504 Query: 272 XXXXXXXXXXXAVDGLYADGAYTGGTQVVAFDISGSVTWLNESGVTTANT 321 A +GLYADG Y+GGT+VV+F S +TW+NESGVT A + Sbjct: 505 TIYSGGKSTGTATNGLYADGEYSGGTKVVSFTASSLITWVNESGVTEAQS 554 >C1I4V2.1 C1I4V2_9CLOT Putative uncharacterized protein Length = 616 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 121/283 (42%), Positives = 182/283 (64%), Gaps = 2/283 (0%) Query: 29 KGLKAGGDLTVNGGSFTINSADDALHSNSNVSVTNGEFKITAGDDGIHADSLTSLSGGTI 88 KG+KA + ++ G+ I+S+DD++HSN NV + G +++GDDGIHADS+ ++ G I Sbjct: 306 KGIKAVVGIKIDSGNIKIDSSDDSIHSNGNVEINGGSINVSSGDDGIHADSVIDINDGDI 365 Query: 89 DITKSYEGIEGGNITISGGDIRVVAXXXXXXXXXXXXXXAAQGTAQQDQFXXXXXXXXXX 148 +I+KSYEGIE I I+ G+I++VA + G Q+ F Sbjct: 366 NISKSYEGIEAETININDGNIKLVASDDGINAAGGNDGSSMNGRPGQNSFASSGNGTINL 425 Query: 149 XXXXVTVDSTGDGLDSNGSVSMTGGTVIVNGPTNDGNGPLDYDGTFDMTGGLLVAAGSSG 208 + VD++GDG+D+NGS+ M GTVIVNGP ++GNG LDYDG F+++GGLL+AAG +G Sbjct: 426 NGGKIIVDASGDGIDANGSIYMKEGTVIVNGPEDNGNGALDYDGKFEISGGLLIAAGGAG 485 Query: 209 MAQAPGEDSSQYSVSMSFTAAQQAGTLVHLEDGDGNNILTFAPSKNFSSVVVSSPDLKKX 268 MAQ+P S+Q SV++ FT+ A TL+ +ED GN ++TFAPSKN SVV+SSP++K Sbjct: 486 MAQSPSTTSTQNSVNI-FTSL-SANTLIRIEDESGNEVITFAPSKNAQSVVISSPNIKTN 543 Query: 269 XXXXXXXXXXXXXXAVDGLYADGAYTGGTQVVAFDISGSVTWL 311 ++DGLY++G+Y+GGT++ +F + +VT + Sbjct: 544 ESYKVYTGGESTGTSIDGLYSEGSYSGGTELESFTAASTVTTV 586 >C1AAE0.1 C1AAE0_GEMAT Putative uncharacterized protein Length = 619 Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 121/280 (43%), Positives = 164/280 (58%), Gaps = 13/280 (4%) Query: 29 KGLKAGGDLTVNGGSFTINSADDALHSNSNVSVTNGEFKITAGDDGIHADSLTSLSGGTI 88 KGLKAG +GG+ T+N+ADD LHSN+N+ V G F I+ GDDG+HADS +++GG+I Sbjct: 343 KGLKAGVMFVADGGTATLNTADDGLHSNANLVVNGGTFTISTGDDGVHADSAVTINGGSI 402 Query: 89 DITKSYEGIEGG--NITISGGDIRVVAXXXXXXXXXXXXXXAAQGTAQQDQFXXXXXXXX 146 D+TKSYEGIE G ++T +GG +RVVA A+GT Sbjct: 403 DVTKSYEGIEAGTADMTFNGGRVRVVASDDGINLSGDGD--GARGTGNY---------TI 451 Query: 147 XXXXXXVTVDSTGDGLDSNGSVSMTGGTVIVNGPTNDGNGPLDYDGTFDMTGGLLVAAGS 206 +T S GDG+DSN +++MTGG ++V GP + N +DYD TF MTGG LV GS Sbjct: 452 RINGGRITSLSGGDGIDSNSAIAMTGGCLLVAGPQSGANPAIDYDRTFVMTGGFLVGTGS 511 Query: 207 SGMAQAPGEDSSQYSVSMSFTAAQQAGTLVHLEDGDGNNILTFAPSKNFSSVVVSSPDLK 266 + MAQAPG S+Q S+ +F + + AG ++H++ G ++L AP K + S+VVSSP L Sbjct: 512 TNMAQAPGTASTQPSIQFTFGSTRTAGGILHIQTSAGVSVLDLAPVKGYQSLVVSSPLLT 571 Query: 267 KXXXXXXXXXXXXXXXAVDGLYADGAYTGGTQVVAFDISG 306 AVDGLY G YT GT V F ++G Sbjct: 572 VGGSYKLYSGGTESGTAVDGLYTGGQYTLGTLVQTFTLAG 611 >A9AXS7.1 A9AXS7_HERA2 Putative uncharacterized protein Length = 617 Score = 194 bits (494), Expect = 9e-48, Method: Compositional matrix adjust. Identities = 117/289 (40%), Positives = 169/289 (58%), Gaps = 5/289 (1%) Query: 29 KGLKAGGDLTVNGGSFTINSADDALHSNSNVSVTNGEFKITAGDDGIHADSLTSLSGGTI 88 KGLKAG +L + G+ TI++A+DALHS+SNV++ G + AGDDG+HAD+ +++GG + Sbjct: 324 KGLKAGQNLVIADGTITIDAAEDALHSDSNVTINAGTINLAAGDDGVHADANLTINGGDL 383 Query: 89 DITKSYEGIEGGNITISGGDIRVVAXXXXXXXXXXXXXXAAQGTA----QQDQFXXXXXX 144 I+ SYEG+E ITI+ G I +VA G + D F Sbjct: 384 AISTSYEGLESAVITINDGAISLVAQDDGVNVAGGDGSSMQGGGMGRPNRNDSFAAGTYF 443 Query: 145 XXXXXXXXVTVDSTGDGLDSNGSVSMTGGTVIVNGPTNDGNGPLDYDGTFDMTGGLLVAA 204 V V++ GDGLD+NGS+ M GG V+V+GPT NG LDYDG F + GG+LVA Sbjct: 444 LYINGGTLV-VNAAGDGLDANGSIEMNGGLVLVHGPTEQMNGALDYDGGFALNGGILVAT 502 Query: 205 GSSGMAQAPGEDSSQYSVSMSFTAAQQAGTLVHLEDGDGNNILTFAPSKNFSSVVVSSPD 264 GS+GMAQAP S+Q SV +++++AQ AG LV + D G I++F PSK + ++V SSP+ Sbjct: 503 GSAGMAQAPDTSSTQASVLINYSSAQAAGNLVQILDQSGKAIVSFTPSKQYQTLVFSSPE 562 Query: 265 LKKXXXXXXXXXXXXXXXAVDGLYADGAYTGGTQVVAFDISGSVTWLNE 313 L++ + GL ++ A GGT +F +S VT + + Sbjct: 563 LQQGASYTINSGGSLQTHSASGLSSETANAGGTAYASFSVSDIVTQVGQ 611 >Q24Y85.1 Q24Y85_DESHY Putative uncharacterized protein Length = 644 Score = 178 bits (452), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 103/237 (43%), Positives = 144/237 (60%) Query: 29 KGLKAGGDLTVNGGSFTINSADDALHSNSNVSVTNGEFKITAGDDGIHADSLTSLSGGTI 88 KG KAG ++ +N GSF I+S+DDALHSN + +T G + +++GDDG+HAD +++GG + Sbjct: 344 KGFKAGKEMILNEGSFDIDSSDDALHSNGKLVITGGTYAVSSGDDGLHADGDLTITGGIL 403 Query: 89 DITKSYEGIEGGNITISGGDIRVVAXXXXXXXXXXXXXXAAQGTAQQDQFXXXXXXXXXX 148 + KSYEGIEG ITI+GG I V A A Q Sbjct: 404 LVAKSYEGIEGNTITITGGIIEVTARDDGLNVAGGNDGSAFGRPGQNSFTQVSTDHYLRI 463 Query: 149 XXXXVTVDSTGDGLDSNGSVSMTGGTVIVNGPTNDGNGPLDYDGTFDMTGGLLVAAGSSG 208 + VD+ GDGLDSNG++ + GGT+ V+GP N+GN LDYDGT ++GG+L+ GSSG Sbjct: 464 SGGEIKVDAAGDGLDSNGNLFVEGGTITVSGPINNGNAALDYDGTATISGGVLMVTGSSG 523 Query: 209 MAQAPGEDSSQYSVSMSFTAAQQAGTLVHLEDGDGNNILTFAPSKNFSSVVVSSPDL 265 MAQ E+S QYS+ + + + AG+ V L D + IL + +K F+SV +SSPDL Sbjct: 524 MAQGFSEESGQYSLLHNLSTSVAAGSEVTLTDVNDKVILKWTANKEFTSVHLSSPDL 580 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.308 0.129 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,643,535,378 Number of extensions: 65074755 Number of successful extensions: 157498 Number of sequences better than 1.0e-05: 64 Number of HSP's gapped: 157080 Number of HSP's successfully gapped: 92 Length of query: 364 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 227 Effective length of database: 1,770,017,148 Effective search space: 401793892596 Effective search space used: 401793892596 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 132 (55.5 bits)