BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0495.0008.p (343 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B0NC07.1 B0NC07_EUBSP Putative uncharacterized protein 400 e-109 Q84CY9.1 Q84CY9_RHILV Sugar dehydrogenase 253 2e-65 B0J4R2.1 B0J4R2_RHILT Oxidoreductase domain protein 246 2e-63 C4EDJ2.1 C4EDJ2_STRRS Predicted dehydrogenase 221 7e-56 A8RAP7.1 A8RAP7_9FIRM Putative uncharacterized protein 209 3e-52 >B0NC07.1 B0NC07_EUBSP Putative uncharacterized protein Length = 343 Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust. Identities = 191/343 (55%), Positives = 249/343 (72%), Gaps = 2/343 (0%) Query: 1 MTVIKMGIVGAGTWGETHAFIYNDHPGAEVTAVCDMNIERAKALADKFNIPGNHVFTDHK 60 M I+MGIVGAGTWGETHA IY +H A+ A+CDMN ERA+A+ADK+ I V+TD+ Sbjct: 3 MKQIRMGIVGAGTWGETHASIYAEHLFADPVAICDMNEERARAIADKYGI--RKVYTDYH 60 Query: 61 EMLRSADIDAVAIVTPDFAHTRIAVDCANAGKHFIIEKPLTTSREEADEIVEAVERNNVR 120 ++ ++DAVAIVTPDFAH IAV A+A K+ +IEKPL T++E+ I EAV RN VR Sbjct: 61 DLAADEEVDAVAIVTPDFAHADIAVAMADAKKNILIEKPLATTKEDIARICEAVNRNQVR 120 Query: 121 MMVDLHSRWSPLVAIPKKSIVDGDIGKPYSAYYRLNDIKWVATDLLPWAAKSSILWFLGY 180 MVDLH+RW+P K+ I G +G PY+AY R +D+KWVATD+L WA+KSSILWFLG Sbjct: 121 CMVDLHNRWNPPFNTAKQEISSGKLGTPYTAYIRHSDVKWVATDMLSWASKSSILWFLGS 180 Query: 181 HSVDVLRWLFDDEVERVYSVSREGVLQGEGVDTVDIYQTILEFKNGGIATMENGWITPNS 240 HS+D LRWLFDDEV+RVYSV +EG+L+ GVDT DIY T +EF+ GG+A MENGW+TPN Sbjct: 181 HSLDSLRWLFDDEVKRVYSVKKEGILKELGVDTPDIYLTTIEFEKGGVAHMENGWVTPNG 240 Query: 241 NPNVNDMKLNITGTKGMFNIDPTHSQMMERFTEMKADRPDLLVRHFIHGKPKGFAYESIR 300 N N+ND + ++ T+GM ++D + ++E TE KA PD+LV + + + KG +YESIR Sbjct: 241 NRNINDFRCSVMCTEGMISLDLSSHNLIEEVTEEKASVPDILVSNMVFDRCKGLSYESIR 300 Query: 301 HFIDHLISGEPFYVSMEDAYNTTMVILAIMESAKTRTPVNVVY 343 F+D L+ G F V++EDA T + I+AI ESA T PV V Y Sbjct: 301 DFVDRLVDGREFRVTLEDARKTALAIIAIHESADTGLPVEVEY 343 >Q84CY9.1 Q84CY9_RHILV Sugar dehydrogenase Length = 341 Score = 253 bits (646), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 135/342 (39%), Positives = 194/342 (56%), Gaps = 3/342 (0%) Query: 1 MTVIKMGIVGAGTWGETHAFIYNDHPGAEVTAVCDMNIERAKALADKFNIPGNHVFTDHK 60 M+ ++MG++GAG WG HA +N P E+ VCD++ RA + + + FTD++ Sbjct: 1 MSRLRMGVIGAGLWGGNHAHTFNVLPETELVGVCDLDEGRALKMKETYG--ATRAFTDYQ 58 Query: 61 EMLRSADIDAVAIVTPDFAHTRIAVDCANAGKHFIIEKPLTTSREEADEIVEAVERNNVR 120 +++ S IDA+++ TPDF HT I + A KH + EKPL T+ EA+EI A + + Sbjct: 59 KLISSDQIDAISVATPDFTHTPIILAALKADKHVLSEKPLATTVSEAEEIAAAAAISKGK 118 Query: 121 MMVDLHSRWSPLVAIPKKSIVDGDIGKPYSAYYRLNDIKWVATDLLPWAAKSSILWFLGY 180 +M+D H+R +P++A + I DG IG RL++ +V ++L WAAKSS LWFLG Sbjct: 119 LMIDFHNRVNPILAQVRDMIQDGQIGLAKHGTARLSNTTFVPFEMLSWAAKSSALWFLGS 178 Query: 181 HSVDVLRWLFDDEVERVYSVSREGVLQGEGVDTVDIYQTILEFKNGGIATMENGWITPNS 240 H VDVLR++ DEV RVYSV+R G L GVDT D + +ILEF G + TMEN WI Sbjct: 179 HLVDVLRFILADEVVRVYSVARSGTLSAGGVDTKDFHASILEFSKGTVVTMENSWILSRD 238 Query: 241 NPNVNDMKLNITGTKGMFNIDPTHSQMMERFTEMKADRPDLL-VRHFIHGKPKGFAYESI 299 NP++ D K+ G KG DPTHS + R + D + + + GF ESI Sbjct: 239 NPSLVDFKVEFVGEKGQIQADPTHSGGLRRIVDGGLKYNDYIGITPTGATRIGGFVLESI 298 Query: 300 RHFIDHLISGEPFYVSMEDAYNTTMVILAIMESAKTRTPVNV 341 F+D ++ P +D T ++ AI ES T VN+ Sbjct: 299 ARFVDSVVRDAPLLADAQDGLANTKILAAIEESVATGKAVNI 340 >B0J4R2.1 B0J4R2_RHILT Oxidoreductase domain protein Length = 341 Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 131/342 (38%), Positives = 192/342 (56%), Gaps = 3/342 (0%) Query: 1 MTVIKMGIVGAGTWGETHAFIYNDHPGAEVTAVCDMNIERAKALADKFNIPGNHVFTDHK 60 M ++MG++GAG WG HA +N P E+ VCD++ RA + + + FTD++ Sbjct: 1 MNKLRMGVIGAGLWGGNHAHTFNVLPETELVGVCDLDEGRALKMKEAYR--ATQAFTDYQ 58 Query: 61 EMLRSADIDAVAIVTPDFAHTRIAVDCANAGKHFIIEKPLTTSREEADEIVEAVERNNVR 120 +++ S IDA+++ TPDF HT I + A KH + EKPL T+ EA+EI A ++ + Sbjct: 59 KLISSDQIDAISVATPDFTHTPIILAALKADKHVLSEKPLATTVREAEEIAAAAAKSKGK 118 Query: 121 MMVDLHSRWSPLVAIPKKSIVDGDIGKPYSAYYRLNDIKWVATDLLPWAAKSSILWFLGY 180 +M+D H+R +P++A + I G IG RL++ +V ++L WAAKSS LWFLG Sbjct: 119 LMIDFHNRVNPILAQVRDMIQGGQIGLAKHGTARLSNTTFVPFEMLSWAAKSSALWFLGS 178 Query: 181 HSVDVLRWLFDDEVERVYSVSREGVLQGEGVDTVDIYQTILEFKNGGIATMENGWITPNS 240 H VDVLR++ DEV RVYSV+R G L GVDT D + ++LEF G + TMEN WI Sbjct: 179 HLVDVLRFILADEVVRVYSVARSGTLSAGGVDTKDFHVSVLEFSKGTVVTMENSWILSRD 238 Query: 241 NPNVNDMKLNITGTKGMFNIDPTHSQMMERFTEMKADRPDLL-VRHFIHGKPKGFAYESI 299 NP++ D K+ G KG DPTH+ + + + D + + + GF ESI Sbjct: 239 NPSLVDFKIEFVGEKGQVQADPTHNGGLRKIVDGGLKYNDYIGITPTGATRIGGFVLESI 298 Query: 300 RHFIDHLISGEPFYVSMEDAYNTTMVILAIMESAKTRTPVNV 341 F+D ++ P +D T + AI ES T VN+ Sbjct: 299 ARFVDSVVRDAPLLADAQDGLANTKTLAAIEESVATGKAVNI 340 >C4EDJ2.1 C4EDJ2_STRRS Predicted dehydrogenase Length = 342 Score = 221 bits (563), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 121/341 (35%), Positives = 185/341 (54%), Gaps = 6/341 (1%) Query: 1 MTVIKMGIVGAGTWGETHAFIYNDHPGAEVTAVCDMNIERAKALADKFNIPGNHVFTDHK 60 ++ +++GIVGAG G HA + HP AE+TAV E A+ LA + G V D++ Sbjct: 4 LSKLRVGIVGAGIMGRGHAEVLAAHPHAEITAVASRTREHAEELAGRV---GAAVHLDYQ 60 Query: 61 EMLRSADIDAVAIVTPDFAHTRIAVDCANAGKHFIIEKPLTTSREEADEIVEAVERNNVR 120 E+L S +DAV+I TPD H + V A AG H ++EKP TT+ +AD + A+ R V Sbjct: 61 ELLASGTVDAVSITTPDHLHADVMVAAAEAGVHILVEKPFTTTVADADRALAAIRRAGVV 120 Query: 121 MMVDLHSRWSPLVAIPKKSIVDGDIGKPYSAYYRLNDIKWVATDLLPWAAKSSILWFLGY 180 M + RW P A K + +G+ Y R ND V T+++ WA +++ WFL Sbjct: 121 AMCLFNHRWVPAYAQAKDQM--PLLGEAVVGYARKNDTIHVPTEMIGWADRTTCAWFLSS 178 Query: 181 HSVDVLRWLFDDEVERVYSVSREGVLQGEGVDTVDIYQTILEFKNGGIATMENGWITPNS 240 H +D++ WLFDDEV V++ +R G L+ GVDT D Q F G AT E+ WI PN+ Sbjct: 179 HDIDLVTWLFDDEVVEVFATARHGKLRAMGVDTPDAMQIQARFSRGATATFESAWIYPNT 238 Query: 241 NPNVNDMKLNITGTKGMFNIDPTHSQMMERFTEMKADRPDLLVRHFIHGKPKGFAYESIR 300 P + D + + G G+ +D + ++ T+ P +++ +HG P G ++I Sbjct: 239 FPTMVDSYVTVVGEDGVVQLD-RQRENIQLATDKGYTYPRNMLQRVVHGIPAGAYRDAIE 297 Query: 301 HFIDHLISGEPFYVSMEDAYNTTMVILAIMESAKTRTPVNV 341 HF+ +G +++E + + T V+ A ESA+T PV V Sbjct: 298 HFVHCARTGTEPLITVESSRHVTAVLAAAHESARTGLPVKV 338 >A8RAP7.1 A8RAP7_9FIRM Putative uncharacterized protein Length = 336 Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 125/336 (37%), Positives = 174/336 (51%), Gaps = 7/336 (2%) Query: 1 MTVIKMGIVGAGTWGETHAFIYNDHPGAEVTAVCDMNIERAKALADKFNIPGNHVFTDHK 60 M I +G+VGAG +G H + P E CD+N ER A + K+N+ G + K Sbjct: 1 MKKITVGVVGAGIYGNYHIHTFICDPNVERVVFCDLNEERRCATSKKYNVTG---YATVK 57 Query: 61 EMLRSADIDAVAIVTPDFAHTRIAVDCANAG-KHFIIEKPLTTSREEADEIVEAVERNNV 119 EM+ + +DAV+I TPD H A D AG K+ +IEKPL T+ EE +EI+ ER+NV Sbjct: 58 EMIHAEKLDAVSIATPDPYHFEPAKDAIEAGIKYLLIEKPLATTIEECEEILRLAERHNV 117 Query: 120 RMMVDLHSRWSPLVAIPKKSIVDGDIGKPYSAYYRLNDIKWVATDLLPWAAKSSILWFLG 179 ++ VD H RW P K I D K Y L+DI V W KSS WFLG Sbjct: 118 KISVDFHKRWDPAYNCIKDEI-QKDKEKVIRGYMALDDIIDVPKKWFTWTDKSSPAWFLG 176 Query: 180 YHSVDVLRWLFDDEVERVYSVSREGVLQGEGVDTVDIYQTILEFKNGGIATMENGWITPN 239 H D++R++ EVE+VY+ + +L+ EG T D QTIL K+G T+E WI PN Sbjct: 177 VHCYDLIRYITGSEVEKVYASGNKEILEKEGYHTWDNIQTILTMKDGSNWTVETSWILPN 236 Query: 240 SNPNVNDMKLNITGTKGMFNIDPTHSQMMERFTEMKADRPDLLVRHFIHGKPKGFAYESI 299 + P ND +L I F + ++ FTE K + P+ + +F GF E + Sbjct: 237 TYPKSNDGQLVILTENKYFKNESYRG--VKYFTEKKENIPNYIFMNFDEHSASGFGLEPM 294 Query: 300 RHFIDHLISGEPFYVSMEDAYNTTMVILAIMESAKT 335 + FI +I+ F S D T + A+ ESA+T Sbjct: 295 QEFISDIINEREFRTSAYDGLQATRIAQAVHESAET 330 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.136 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,124,145,133 Number of extensions: 90599841 Number of successful extensions: 220304 Number of sequences better than 1.0e-05: 4184 Number of HSP's gapped: 217470 Number of HSP's successfully gapped: 4184 Length of query: 343 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 207 Effective length of database: 1,779,438,163 Effective search space: 368343699741 Effective search space used: 368343699741 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)